Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is yeaN [H]

Identifier: 119945292

GI number: 119945292

Start: 1923182

End: 1924378

Strand: Reverse

Name: yeaN [H]

Synonym: Ping_1574

Alternate gene names: 119945292

Gene position: 1924378-1923182 (Counterclockwise)

Preceding gene: 119945294

Following gene: 119945289

Centisome position: 42.2

GC content: 43.02

Gene sequence:

>1197_bases
GTGCATCCAGTTTTGCCTACCCGCTCTATTTTCTCATCTGCTATTTTGATCCTTGGTATTTTATTTATCGCCGCTAATCT
ACGTGGACCAATAACAGGTATTGGACCAGTACTTGATCAAATTATTGAGAGCTTTGCATTAAGCGCTCCTCAAGCGGGTA
TGCTAACCACTTTGCCATTACTCGCATTTGCTATCGCCTCGCCAATGGCAACGAGCTTAGCTAAAAAGCAAGGCCTTGAA
ATATCACTGTTTGTTGCGTTAGTGCTGATTGGTTTAGGGCTGAGTTCCCGGCTGATAGATTCTGCTGTTGTGCTTTATAT
TGGTACTGCCGTCATTGGGGCCGGAATTGCCATTGGTAATGTATTGTTACCGAGTTTAATTAAGCGTGATTTTCCGCATA
AAGTCGCGGTAATGACCTCTGCCTATGTACTCGCTATGGGGATTTTTGCTGGTAGTTATTCTGCCTTACTTATTCCTTTA
GCCGCCTATAAAGAAATAGGTTGGCAAATTGCTTTAGCCAGTTACGGATTAGTGACGCTAATAAGTCTCCTTGTTTGGTT
ACCGCAATTAAAGTTACATACCAAACCAACTAGAGATATTACTCAACCGGATACCCAGGGTAAAATTTGGCATCATGCTT
TGGCGTGGCATATTACTTTGTGTTTGGGTCTTAATTCATTTTTTACTTATGTGATGATTGCTTGGTTACCTAATATATTA
ATGGAGGGCGGCCTCGATGCACAGCAAGCTGGCGTGCTGCATGGTGCATTTCAACTCGCCTCTGCTGTGCCCGGAATTGT
ACTTATTCCGCTATTAGGAAAATTAAAAGATCAACGTTTACTTGCCCTGGGATTGGCGTTAATTGGGTGCTTTTGTTCAT
TAGGGTTACTGTATTTACCAAATTATGCTTTTATATGGTCAACCACTTTAGGCTTTTGTGCCGGGGCAATTTTTATTTTA
GGACTGTCATATATTAGTTTACGCACACATCACTCAGGCCAAGCCTCATCGCTGTCGGGTATGGCGCAGTGCGTAGGTTA
CTTACTTGCTGCTATCGGCCCCATGTTTGCAGGATCTTTGCATACTCACTTTGAAAGCTGGGCACCTGTACTGTGGTTAT
GTGCTTTAGCAAGTCTGCTCTGTGGTGTGTTTGGTTATTTAGGCGGGCGTAACATTACTTTGAGCGAGTCACTTTAA

Upstream 100 bases:

>100_bases
AATCCGATGATTGCAGACAAATCAAAGCTATAAATTAATGCGTGTACCTGTCTCTCTCTGCTATCATCCTAGGACTTTTT
TCTAACTATTGAGTTTTATT

Downstream 100 bases:

>100_bases
GTACAAATGCTTTAAAACCACTTAATAAAATAAATTGAAATTGATGAAGCTGTTTAATATAAAGCTGGCTGCAATTAACT
GACGACAATTGCAGTCAGCT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MHPVLPTRSIFSSAILILGILFIAANLRGPITGIGPVLDQIIESFALSAPQAGMLTTLPLLAFAIASPMATSLAKKQGLE
ISLFVALVLIGLGLSSRLIDSAVVLYIGTAVIGAGIAIGNVLLPSLIKRDFPHKVAVMTSAYVLAMGIFAGSYSALLIPL
AAYKEIGWQIALASYGLVTLISLLVWLPQLKLHTKPTRDITQPDTQGKIWHHALAWHITLCLGLNSFFTYVMIAWLPNIL
MEGGLDAQQAGVLHGAFQLASAVPGIVLIPLLGKLKDQRLLALGLALIGCFCSLGLLYLPNYAFIWSTTLGFCAGAIFIL
GLSYISLRTHHSGQASSLSGMAQCVGYLLAAIGPMFAGSLHTHFESWAPVLWLCALASLLCGVFGYLGGRNITLSESL

Sequences:

>Translated_398_residues
MHPVLPTRSIFSSAILILGILFIAANLRGPITGIGPVLDQIIESFALSAPQAGMLTTLPLLAFAIASPMATSLAKKQGLE
ISLFVALVLIGLGLSSRLIDSAVVLYIGTAVIGAGIAIGNVLLPSLIKRDFPHKVAVMTSAYVLAMGIFAGSYSALLIPL
AAYKEIGWQIALASYGLVTLISLLVWLPQLKLHTKPTRDITQPDTQGKIWHHALAWHITLCLGLNSFFTYVMIAWLPNIL
MEGGLDAQQAGVLHGAFQLASAVPGIVLIPLLGKLKDQRLLALGLALIGCFCSLGLLYLPNYAFIWSTTLGFCAGAIFIL
GLSYISLRTHHSGQASSLSGMAQCVGYLLAAIGPMFAGSLHTHFESWAPVLWLCALASLLCGVFGYLGGRNITLSESL
>Mature_398_residues
MHPVLPTRSIFSSAILILGILFIAANLRGPITGIGPVLDQIIESFALSAPQAGMLTTLPLLAFAIASPMATSLAKKQGLE
ISLFVALVLIGLGLSSRLIDSAVVLYIGTAVIGAGIAIGNVLLPSLIKRDFPHKVAVMTSAYVLAMGIFAGSYSALLIPL
AAYKEIGWQIALASYGLVTLISLLVWLPQLKLHTKPTRDITQPDTQGKIWHHALAWHITLCLGLNSFFTYVMIAWLPNIL
MEGGLDAQQAGVLHGAFQLASAVPGIVLIPLLGKLKDQRLLALGLALIGCFCSLGLLYLPNYAFIWSTTLGFCAGAIFIL
GLSYISLRTHHSGQASSLSGMAQCVGYLLAAIGPMFAGSLHTHFESWAPVLWLCALASLLCGVFGYLGGRNITLSESL

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=377, Percent_Identity=47.2148541114058, Blast_Score=289, Evalue=3e-79,
Organism=Escherichia coli, GI1786536, Length=360, Percent_Identity=26.6666666666667, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42156; Mature: 42156

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPVLPTRSIFSSAILILGILFIAANLRGPITGIGPVLDQIIESFALSAPQAGMLTTLPL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LAFAIASPMATSLAKKQGLEISLFVALVLIGLGLSSRLIDSAVVLYIGTAVIGAGIAIGN
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLPSLIKRDFPHKVAVMTSAYVLAMGIFAGSYSALLIPLAAYKEIGWQIALASYGLVTL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHCCHHHH
ISLLVWLPQLKLHTKPTRDITQPDTQGKIWHHALAWHITLCLGLNSFFTYVMIAWLPNIL
HHHHHHHCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEGGLDAQQAGVLHGAFQLASAVPGIVLIPLLGKLKDQRLLALGLALIGCFCSLGLLYLP
HHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NYAFIWSTTLGFCAGAIFILGLSYISLRTHHSGQASSLSGMAQCVGYLLAAIGPMFAGSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HTHFESWAPVLWLCALASLLCGVFGYLGGRNITLSESL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC
>Mature Secondary Structure
MHPVLPTRSIFSSAILILGILFIAANLRGPITGIGPVLDQIIESFALSAPQAGMLTTLPL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LAFAIASPMATSLAKKQGLEISLFVALVLIGLGLSSRLIDSAVVLYIGTAVIGAGIAIGN
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLPSLIKRDFPHKVAVMTSAYVLAMGIFAGSYSALLIPLAAYKEIGWQIALASYGLVTL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHCCHHHH
ISLLVWLPQLKLHTKPTRDITQPDTQGKIWHHALAWHITLCLGLNSFFTYVMIAWLPNIL
HHHHHHHCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEGGLDAQQAGVLHGAFQLASAVPGIVLIPLLGKLKDQRLLALGLALIGCFCSLGLLYLP
HHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NYAFIWSTTLGFCAGAIFILGLSYISLRTHHSGQASSLSGMAQCVGYLLAAIGPMFAGSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HTHFESWAPVLWLCALASLLCGVFGYLGGRNITLSESL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]