| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yeaN [H]
Identifier: 119945292
GI number: 119945292
Start: 1923182
End: 1924378
Strand: Reverse
Name: yeaN [H]
Synonym: Ping_1574
Alternate gene names: 119945292
Gene position: 1924378-1923182 (Counterclockwise)
Preceding gene: 119945294
Following gene: 119945289
Centisome position: 42.2
GC content: 43.02
Gene sequence:
>1197_bases GTGCATCCAGTTTTGCCTACCCGCTCTATTTTCTCATCTGCTATTTTGATCCTTGGTATTTTATTTATCGCCGCTAATCT ACGTGGACCAATAACAGGTATTGGACCAGTACTTGATCAAATTATTGAGAGCTTTGCATTAAGCGCTCCTCAAGCGGGTA TGCTAACCACTTTGCCATTACTCGCATTTGCTATCGCCTCGCCAATGGCAACGAGCTTAGCTAAAAAGCAAGGCCTTGAA ATATCACTGTTTGTTGCGTTAGTGCTGATTGGTTTAGGGCTGAGTTCCCGGCTGATAGATTCTGCTGTTGTGCTTTATAT TGGTACTGCCGTCATTGGGGCCGGAATTGCCATTGGTAATGTATTGTTACCGAGTTTAATTAAGCGTGATTTTCCGCATA AAGTCGCGGTAATGACCTCTGCCTATGTACTCGCTATGGGGATTTTTGCTGGTAGTTATTCTGCCTTACTTATTCCTTTA GCCGCCTATAAAGAAATAGGTTGGCAAATTGCTTTAGCCAGTTACGGATTAGTGACGCTAATAAGTCTCCTTGTTTGGTT ACCGCAATTAAAGTTACATACCAAACCAACTAGAGATATTACTCAACCGGATACCCAGGGTAAAATTTGGCATCATGCTT TGGCGTGGCATATTACTTTGTGTTTGGGTCTTAATTCATTTTTTACTTATGTGATGATTGCTTGGTTACCTAATATATTA ATGGAGGGCGGCCTCGATGCACAGCAAGCTGGCGTGCTGCATGGTGCATTTCAACTCGCCTCTGCTGTGCCCGGAATTGT ACTTATTCCGCTATTAGGAAAATTAAAAGATCAACGTTTACTTGCCCTGGGATTGGCGTTAATTGGGTGCTTTTGTTCAT TAGGGTTACTGTATTTACCAAATTATGCTTTTATATGGTCAACCACTTTAGGCTTTTGTGCCGGGGCAATTTTTATTTTA GGACTGTCATATATTAGTTTACGCACACATCACTCAGGCCAAGCCTCATCGCTGTCGGGTATGGCGCAGTGCGTAGGTTA CTTACTTGCTGCTATCGGCCCCATGTTTGCAGGATCTTTGCATACTCACTTTGAAAGCTGGGCACCTGTACTGTGGTTAT GTGCTTTAGCAAGTCTGCTCTGTGGTGTGTTTGGTTATTTAGGCGGGCGTAACATTACTTTGAGCGAGTCACTTTAA
Upstream 100 bases:
>100_bases AATCCGATGATTGCAGACAAATCAAAGCTATAAATTAATGCGTGTACCTGTCTCTCTCTGCTATCATCCTAGGACTTTTT TCTAACTATTGAGTTTTATT
Downstream 100 bases:
>100_bases GTACAAATGCTTTAAAACCACTTAATAAAATAAATTGAAATTGATGAAGCTGTTTAATATAAAGCTGGCTGCAATTAACT GACGACAATTGCAGTCAGCT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MHPVLPTRSIFSSAILILGILFIAANLRGPITGIGPVLDQIIESFALSAPQAGMLTTLPLLAFAIASPMATSLAKKQGLE ISLFVALVLIGLGLSSRLIDSAVVLYIGTAVIGAGIAIGNVLLPSLIKRDFPHKVAVMTSAYVLAMGIFAGSYSALLIPL AAYKEIGWQIALASYGLVTLISLLVWLPQLKLHTKPTRDITQPDTQGKIWHHALAWHITLCLGLNSFFTYVMIAWLPNIL MEGGLDAQQAGVLHGAFQLASAVPGIVLIPLLGKLKDQRLLALGLALIGCFCSLGLLYLPNYAFIWSTTLGFCAGAIFIL GLSYISLRTHHSGQASSLSGMAQCVGYLLAAIGPMFAGSLHTHFESWAPVLWLCALASLLCGVFGYLGGRNITLSESL
Sequences:
>Translated_398_residues MHPVLPTRSIFSSAILILGILFIAANLRGPITGIGPVLDQIIESFALSAPQAGMLTTLPLLAFAIASPMATSLAKKQGLE ISLFVALVLIGLGLSSRLIDSAVVLYIGTAVIGAGIAIGNVLLPSLIKRDFPHKVAVMTSAYVLAMGIFAGSYSALLIPL AAYKEIGWQIALASYGLVTLISLLVWLPQLKLHTKPTRDITQPDTQGKIWHHALAWHITLCLGLNSFFTYVMIAWLPNIL MEGGLDAQQAGVLHGAFQLASAVPGIVLIPLLGKLKDQRLLALGLALIGCFCSLGLLYLPNYAFIWSTTLGFCAGAIFIL GLSYISLRTHHSGQASSLSGMAQCVGYLLAAIGPMFAGSLHTHFESWAPVLWLCALASLLCGVFGYLGGRNITLSESL >Mature_398_residues MHPVLPTRSIFSSAILILGILFIAANLRGPITGIGPVLDQIIESFALSAPQAGMLTTLPLLAFAIASPMATSLAKKQGLE ISLFVALVLIGLGLSSRLIDSAVVLYIGTAVIGAGIAIGNVLLPSLIKRDFPHKVAVMTSAYVLAMGIFAGSYSALLIPL AAYKEIGWQIALASYGLVTLISLLVWLPQLKLHTKPTRDITQPDTQGKIWHHALAWHITLCLGLNSFFTYVMIAWLPNIL MEGGLDAQQAGVLHGAFQLASAVPGIVLIPLLGKLKDQRLLALGLALIGCFCSLGLLYLPNYAFIWSTTLGFCAGAIFIL GLSYISLRTHHSGQASSLSGMAQCVGYLLAAIGPMFAGSLHTHFESWAPVLWLCALASLLCGVFGYLGGRNITLSESL
Specific function: Unknown
COG id: COG2807
COG function: function code P; Cyanate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]
Homologues:
Organism=Escherichia coli, GI1788092, Length=377, Percent_Identity=47.2148541114058, Blast_Score=289, Evalue=3e-79, Organism=Escherichia coli, GI1786536, Length=360, Percent_Identity=26.6666666666667, Blast_Score=87, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004747 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42156; Mature: 42156
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPVLPTRSIFSSAILILGILFIAANLRGPITGIGPVLDQIIESFALSAPQAGMLTTLPL CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH LAFAIASPMATSLAKKQGLEISLFVALVLIGLGLSSRLIDSAVVLYIGTAVIGAGIAIGN HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VLLPSLIKRDFPHKVAVMTSAYVLAMGIFAGSYSALLIPLAAYKEIGWQIALASYGLVTL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHCCHHHH ISLLVWLPQLKLHTKPTRDITQPDTQGKIWHHALAWHITLCLGLNSFFTYVMIAWLPNIL HHHHHHHCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MEGGLDAQQAGVLHGAFQLASAVPGIVLIPLLGKLKDQRLLALGLALIGCFCSLGLLYLP HHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NYAFIWSTTLGFCAGAIFILGLSYISLRTHHSGQASSLSGMAQCVGYLLAAIGPMFAGSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HTHFESWAPVLWLCALASLLCGVFGYLGGRNITLSESL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC >Mature Secondary Structure MHPVLPTRSIFSSAILILGILFIAANLRGPITGIGPVLDQIIESFALSAPQAGMLTTLPL CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH LAFAIASPMATSLAKKQGLEISLFVALVLIGLGLSSRLIDSAVVLYIGTAVIGAGIAIGN HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VLLPSLIKRDFPHKVAVMTSAYVLAMGIFAGSYSALLIPLAAYKEIGWQIALASYGLVTL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHCCHHHH ISLLVWLPQLKLHTKPTRDITQPDTQGKIWHHALAWHITLCLGLNSFFTYVMIAWLPNIL HHHHHHHCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MEGGLDAQQAGVLHGAFQLASAVPGIVLIPLLGKLKDQRLLALGLALIGCFCSLGLLYLP HHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NYAFIWSTTLGFCAGAIFILGLSYISLRTHHSGQASSLSGMAQCVGYLLAAIGPMFAGSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HTHFESWAPVLWLCALASLLCGVFGYLGGRNITLSESL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]