| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945291
Identifier: 119945291
GI number: 119945291
Start: 1922649
End: 1923065
Strand: Direct
Name: 119945291
Synonym: Ping_1573
Alternate gene names: NA
Gene position: 1922649-1923065 (Clockwise)
Preceding gene: 119945290
Following gene: 119945293
Centisome position: 42.17
GC content: 42.45
Gene sequence:
>417_bases ATGAAAATTAACGGACGCTGCCATTGTGGTGAAGTTGTATACAGTGCAGAAATAGATGAAAATAAAGTAGTAAATTGTCA TTGCACAGATTGCCAAGTGATGTCGAGTGGGCCTTTTCGTAGTGTGGTAATGTCATTACCTAATGCGGTTACTTTTAGCG CGACGCAGCCCAAAGAATACATAAAAACGGCTGAAAGTGGTAATAAACGAGCCCAAGGTTTTTGTGCTAACTGCGGTACG TCACTCTATGCAACCTCGGTAGGTGAAGGCAATAAAGTTTATGGCTTACGGCTAGGCGCGATAGAGCAACGAGAGCAGCT TATCCCTAAAGCACAAATATGGTGTCGCTCTGCTGCACCATGGCTTAAAGAATTAAATAGTATTACAGCATTTGATACTG TACCACCGGCAAAATAA
Upstream 100 bases:
>100_bases TTCAGCTTCAACGGGTTCTCAAATATAGTATTCCTGCACCATATCACAAGATCACATCTTTAATACATTTGGTATAAATA GATATTAATAAGGATATATT
Downstream 100 bases:
>100_bases TGTGTATGTAAGCCTGAGCTGACTGCAATTGTCGTCAGTTAATTGCAGCCAGCTTTATATTAAACAGCTTCATCAATTTC AATTTATTTTATTAAGTGGT
Product: glutathione-dependent formaldehyde-activating, GFA
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Family
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MKINGRCHCGEVVYSAEIDENKVVNCHCTDCQVMSSGPFRSVVMSLPNAVTFSATQPKEYIKTAESGNKRAQGFCANCGT SLYATSVGEGNKVYGLRLGAIEQREQLIPKAQIWCRSAAPWLKELNSITAFDTVPPAK
Sequences:
>Translated_138_residues MKINGRCHCGEVVYSAEIDENKVVNCHCTDCQVMSSGPFRSVVMSLPNAVTFSATQPKEYIKTAESGNKRAQGFCANCGT SLYATSVGEGNKVYGLRLGAIEQREQLIPKAQIWCRSAAPWLKELNSITAFDTVPPAK >Mature_138_residues MKINGRCHCGEVVYSAEIDENKVVNCHCTDCQVMSSGPFRSVVMSLPNAVTFSATQPKEYIKTAESGNKRAQGFCANCGT SLYATSVGEGNKVYGLRLGAIEQREQLIPKAQIWCRSAAPWLKELNSITAFDTVPPAK
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15020; Mature: 15020
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINGRCHCGEVVYSAEIDENKVVNCHCTDCQVMSSGPFRSVVMSLPNAVTFSATQPKEY CCCCCCEECCCEEEEEECCCCCEEEEECCCCEEECCCCHHHHHHHCCCCEEECCCCCHHH IKTAESGNKRAQGFCANCGTSLYATSVGEGNKVYGLRLGAIEQREQLIPKAQIWCRSAAP HHHHCCCCCCCCCEECCCCCEEEEEECCCCCEEEEEEECCHHHHHHHCCHHHHHHCCCCH WLKELNSITAFDTVPPAK HHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKINGRCHCGEVVYSAEIDENKVVNCHCTDCQVMSSGPFRSVVMSLPNAVTFSATQPKEY CCCCCCEECCCEEEEEECCCCCEEEEECCCCEEECCCCHHHHHHHCCCCEEECCCCCHHH IKTAESGNKRAQGFCANCGTSLYATSVGEGNKVYGLRLGAIEQREQLIPKAQIWCRSAAP HHHHCCCCCCCCCEECCCCCEEEEEECCCCCEEEEEEECCHHHHHHHCCHHHHHHCCCCH WLKELNSITAFDTVPPAK HHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA