Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119945280

Identifier: 119945280

GI number: 119945280

Start: 1904712

End: 1905368

Strand: Direct

Name: 119945280

Synonym: Ping_1556

Alternate gene names: NA

Gene position: 1904712-1905368 (Clockwise)

Preceding gene: 119945279

Following gene: 119945281

Centisome position: 41.77

GC content: 31.66

Gene sequence:

>657_bases
ATGCTTACTGCGTGTATTGGAAAAAATATTCGCCAATTTAAAATTGAAAATGTTGCTAAAGCAGATATTGACTTAGTAAC
TGATATTCATATTGAACAACTTCAAAGATTAACTAAATATCTTACCGTGAAACTTTATAAGAGAAACCCGAAAGAGCTGA
AAAAAAATCCAGAGATGACTATTGATAAACGTATTTATCAATTAATGAAAATAAGAAAAAATCCTAAAGAGGCATTAGCT
GAATTAGGTCATTTAGATAATGTTGCAGCTTTAAATTTAGCCTTTTCTGAGGATTTTTCTGGAGATCGGGTCTTTGCATT
AATGGCTGGTGTAACTGTAATGCTCAGTAATTCTTACAATAATCAATTGGAGTTCTATATGCTTGATGATATCGATCAAC
AAAAACTCTATAACAGTGCTCGTAATCTAGAAATCATCTCTTGGAAGTTAAATAATTTAAAAGATGAGAATGGTAATGTA
TTACTGCTTAGCAATGGTTATAGTGCGAATGGAGTTGCTAACTATAGTTATGAAAGAGTGTTAAGCCAGATGATTATTAT
TCAAGATATGATGGCTATACTTATTTCAGATAGCACTAACCGTACAATAAATAAAGTTGTGCACGGGCTTGCTTCCTTCT
TCTTTATTCCGGTTTGA

Upstream 100 bases:

>100_bases
ACTCGCATTGCAGGAGAATAATAATGCACATATTAATTTTAAGAACAGATGCAAGAGATATCTATTTATGCGATTAATTG
TTGCTATTTTTTTTCTTGTT

Downstream 100 bases:

>100_bases
TATCTATTGATAGTTGTCACTGGTTCGGTTGAAGTCGGCAAGCATGTCAAGCATGTCAAGCAGGGAGCTATAAGTGACAA
TCTGAGCAGCTTCCCTAGAC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MLTACIGKNIRQFKIENVAKADIDLVTDIHIEQLQRLTKYLTVKLYKRNPKELKKNPEMTIDKRIYQLMKIRKNPKEALA
ELGHLDNVAALNLAFSEDFSGDRVFALMAGVTVMLSNSYNNQLEFYMLDDIDQQKLYNSARNLEIISWKLNNLKDENGNV
LLLSNGYSANGVANYSYERVLSQMIIIQDMMAILISDSTNRTINKVVHGLASFFFIPV

Sequences:

>Translated_218_residues
MLTACIGKNIRQFKIENVAKADIDLVTDIHIEQLQRLTKYLTVKLYKRNPKELKKNPEMTIDKRIYQLMKIRKNPKEALA
ELGHLDNVAALNLAFSEDFSGDRVFALMAGVTVMLSNSYNNQLEFYMLDDIDQQKLYNSARNLEIISWKLNNLKDENGNV
LLLSNGYSANGVANYSYERVLSQMIIIQDMMAILISDSTNRTINKVVHGLASFFFIPV
>Mature_218_residues
MLTACIGKNIRQFKIENVAKADIDLVTDIHIEQLQRLTKYLTVKLYKRNPKELKKNPEMTIDKRIYQLMKIRKNPKEALA
ELGHLDNVAALNLAFSEDFSGDRVFALMAGVTVMLSNSYNNQLEFYMLDDIDQQKLYNSARNLEIISWKLNNLKDENGNV
LLLSNGYSANGVANYSYERVLSQMIIIQDMMAILISDSTNRTINKVVHGLASFFFIPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24942; Mature: 24942

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTACIGKNIRQFKIENVAKADIDLVTDIHIEQLQRLTKYLTVKLYKRNPKELKKNPEMT
CCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCH
IDKRIYQLMKIRKNPKEALAELGHLDNVAALNLAFSEDFSGDRVFALMAGVTVMLSNSYN
HHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEEEEECCCCCCCHHHHHHHHHHEEEECCCC
NQLEFYMLDDIDQQKLYNSARNLEIISWKLNNLKDENGNVLLLSNGYSANGVANYSYERV
CEEEEEEECCCCHHHHHHHHCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHH
LSQMIIIQDMMAILISDSTNRTINKVVHGLASFFFIPV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLTACIGKNIRQFKIENVAKADIDLVTDIHIEQLQRLTKYLTVKLYKRNPKELKKNPEMT
CCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCH
IDKRIYQLMKIRKNPKEALAELGHLDNVAALNLAFSEDFSGDRVFALMAGVTVMLSNSYN
HHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEEEEECCCCCCCHHHHHHHHHHEEEECCCC
NQLEFYMLDDIDQQKLYNSARNLEIISWKLNNLKDENGNVLLLSNGYSANGVANYSYERV
CEEEEEEECCCCHHHHHHHHCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHH
LSQMIIIQDMMAILISDSTNRTINKVVHGLASFFFIPV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA