| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945280
Identifier: 119945280
GI number: 119945280
Start: 1904712
End: 1905368
Strand: Direct
Name: 119945280
Synonym: Ping_1556
Alternate gene names: NA
Gene position: 1904712-1905368 (Clockwise)
Preceding gene: 119945279
Following gene: 119945281
Centisome position: 41.77
GC content: 31.66
Gene sequence:
>657_bases ATGCTTACTGCGTGTATTGGAAAAAATATTCGCCAATTTAAAATTGAAAATGTTGCTAAAGCAGATATTGACTTAGTAAC TGATATTCATATTGAACAACTTCAAAGATTAACTAAATATCTTACCGTGAAACTTTATAAGAGAAACCCGAAAGAGCTGA AAAAAAATCCAGAGATGACTATTGATAAACGTATTTATCAATTAATGAAAATAAGAAAAAATCCTAAAGAGGCATTAGCT GAATTAGGTCATTTAGATAATGTTGCAGCTTTAAATTTAGCCTTTTCTGAGGATTTTTCTGGAGATCGGGTCTTTGCATT AATGGCTGGTGTAACTGTAATGCTCAGTAATTCTTACAATAATCAATTGGAGTTCTATATGCTTGATGATATCGATCAAC AAAAACTCTATAACAGTGCTCGTAATCTAGAAATCATCTCTTGGAAGTTAAATAATTTAAAAGATGAGAATGGTAATGTA TTACTGCTTAGCAATGGTTATAGTGCGAATGGAGTTGCTAACTATAGTTATGAAAGAGTGTTAAGCCAGATGATTATTAT TCAAGATATGATGGCTATACTTATTTCAGATAGCACTAACCGTACAATAAATAAAGTTGTGCACGGGCTTGCTTCCTTCT TCTTTATTCCGGTTTGA
Upstream 100 bases:
>100_bases ACTCGCATTGCAGGAGAATAATAATGCACATATTAATTTTAAGAACAGATGCAAGAGATATCTATTTATGCGATTAATTG TTGCTATTTTTTTTCTTGTT
Downstream 100 bases:
>100_bases TATCTATTGATAGTTGTCACTGGTTCGGTTGAAGTCGGCAAGCATGTCAAGCATGTCAAGCAGGGAGCTATAAGTGACAA TCTGAGCAGCTTCCCTAGAC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MLTACIGKNIRQFKIENVAKADIDLVTDIHIEQLQRLTKYLTVKLYKRNPKELKKNPEMTIDKRIYQLMKIRKNPKEALA ELGHLDNVAALNLAFSEDFSGDRVFALMAGVTVMLSNSYNNQLEFYMLDDIDQQKLYNSARNLEIISWKLNNLKDENGNV LLLSNGYSANGVANYSYERVLSQMIIIQDMMAILISDSTNRTINKVVHGLASFFFIPV
Sequences:
>Translated_218_residues MLTACIGKNIRQFKIENVAKADIDLVTDIHIEQLQRLTKYLTVKLYKRNPKELKKNPEMTIDKRIYQLMKIRKNPKEALA ELGHLDNVAALNLAFSEDFSGDRVFALMAGVTVMLSNSYNNQLEFYMLDDIDQQKLYNSARNLEIISWKLNNLKDENGNV LLLSNGYSANGVANYSYERVLSQMIIIQDMMAILISDSTNRTINKVVHGLASFFFIPV >Mature_218_residues MLTACIGKNIRQFKIENVAKADIDLVTDIHIEQLQRLTKYLTVKLYKRNPKELKKNPEMTIDKRIYQLMKIRKNPKEALA ELGHLDNVAALNLAFSEDFSGDRVFALMAGVTVMLSNSYNNQLEFYMLDDIDQQKLYNSARNLEIISWKLNNLKDENGNV LLLSNGYSANGVANYSYERVLSQMIIIQDMMAILISDSTNRTINKVVHGLASFFFIPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24942; Mature: 24942
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTACIGKNIRQFKIENVAKADIDLVTDIHIEQLQRLTKYLTVKLYKRNPKELKKNPEMT CCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCH IDKRIYQLMKIRKNPKEALAELGHLDNVAALNLAFSEDFSGDRVFALMAGVTVMLSNSYN HHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEEEEECCCCCCCHHHHHHHHHHEEEECCCC NQLEFYMLDDIDQQKLYNSARNLEIISWKLNNLKDENGNVLLLSNGYSANGVANYSYERV CEEEEEEECCCCHHHHHHHHCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHH LSQMIIIQDMMAILISDSTNRTINKVVHGLASFFFIPV HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLTACIGKNIRQFKIENVAKADIDLVTDIHIEQLQRLTKYLTVKLYKRNPKELKKNPEMT CCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCH IDKRIYQLMKIRKNPKEALAELGHLDNVAALNLAFSEDFSGDRVFALMAGVTVMLSNSYN HHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEEEEECCCCCCCHHHHHHHHHHEEEECCCC NQLEFYMLDDIDQQKLYNSARNLEIISWKLNNLKDENGNVLLLSNGYSANGVANYSYERV CEEEEEEECCCCHHHHHHHHCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHH LSQMIIIQDMMAILISDSTNRTINKVVHGLASFFFIPV HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA