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The map label for this gene is nocM [H]

Identifier: 119945247

GI number: 119945247

Start: 1860979

End: 1861650

Strand: Reverse

Name: nocM [H]

Synonym: Ping_1516

Alternate gene names: 119945247

Gene position: 1861650-1860979 (Counterclockwise)

Preceding gene: 119945248

Following gene: 119945246

Centisome position: 40.83

GC content: 35.86

Gene sequence:

>672_bases
ATGGACAATTATGAATTTCATTGGAATGTTGTATTTGATGCATTCCCGCAACTTTTAAGTGGGGCGTTTACAACGATACA
TGTATCTGTTTTATCTATGCTTCTCGGCATAGTTATTGCGGTATTATTAGCTTTAGGGAAAATGTCAGATTCAAAAGTTT
TTTATAATATGGCAAATATTTGGATAGAGACAGCAAGAAATTTACCAGCACTTTTTCTTATCTACATGGCGTACTTTGGC
CTAGGTGCTTATGGTATCCATCTTAGTCCTTATTTTTCGGTTTTTTCTGCATTAGTATTTATAAATGCAGGATACTTGGC
AGAAACATTTAGGGGTGGTTTTCAGTCAATCCCAACGACTCAATATAGTGCGGCAAAATCGCTCGGAATGAACAGCTTAA
AAGTTTATCGACATGTGATATTGCCACAAATGTTTAGAAGGATTTATCATCCAATGACAAATCAATTTGTTTGGTCAATA
TTAATGAGCTCTCTTGGTATACTTGTGGGTATGAATGAGCTCTCAGGTGAGACGCAGAGACTTCAATCGACTTCATTTAG
AACATTAGAGTTTTTTATAGTCGCAGCTGCGATGTACTTTGTAATAACAAAATTGGTGCTGTTAGCATCAGGCTTGATTG
CAAAAAAAGTGTTTAAAGGGGAGCTTTCATAA

Upstream 100 bases:

>100_bases
GAATTAATCCGCTTTAAGCGGTTTATAAAATCAATCCTCCGACTTTGCCGGAGATATTTGACTATTTAAGGCTCATCAAA
GAAGCTTATAAAGAGGATAT

Downstream 100 bases:

>100_bases
TGAACTTATTTACTCCTTTATCTTGGAATGATTCAGGCTTTATCTTAACCGGGATTTTAAATACCATTTATATCTCTGTC
GTTGCAATAGTTATTGGAAC

Product: ABC polar amino acid transporter inner membrane protein

Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MDNYEFHWNVVFDAFPQLLSGAFTTIHVSVLSMLLGIVIAVLLALGKMSDSKVFYNMANIWIETARNLPALFLIYMAYFG
LGAYGIHLSPYFSVFSALVFINAGYLAETFRGGFQSIPTTQYSAAKSLGMNSLKVYRHVILPQMFRRIYHPMTNQFVWSI
LMSSLGILVGMNELSGETQRLQSTSFRTLEFFIVAAAMYFVITKLVLLASGLIAKKVFKGELS

Sequences:

>Translated_223_residues
MDNYEFHWNVVFDAFPQLLSGAFTTIHVSVLSMLLGIVIAVLLALGKMSDSKVFYNMANIWIETARNLPALFLIYMAYFG
LGAYGIHLSPYFSVFSALVFINAGYLAETFRGGFQSIPTTQYSAAKSLGMNSLKVYRHVILPQMFRRIYHPMTNQFVWSI
LMSSLGILVGMNELSGETQRLQSTSFRTLEFFIVAAAMYFVITKLVLLASGLIAKKVFKGELS
>Mature_223_residues
MDNYEFHWNVVFDAFPQLLSGAFTTIHVSVLSMLLGIVIAVLLALGKMSDSKVFYNMANIWIETARNLPALFLIYMAYFG
LGAYGIHLSPYFSVFSALVFINAGYLAETFRGGFQSIPTTQYSAAKSLGMNSLKVYRHVILPQMFRRIYHPMTNQFVWSI
LMSSLGILVGMNELSGETQRLQSTSFRTLEFFIVAAAMYFVITKLVLLASGLIAKKVFKGELS

Specific function: Component of the nopaline active transport system probably consisting of four subunits:Q, M, P and T. This system is also capable of transporting octopine provided that catabolic functions are induced with nopaline [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787030, Length=201, Percent_Identity=30.3482587064677, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1788226, Length=198, Percent_Identity=30.3030303030303, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI1788646, Length=201, Percent_Identity=25.8706467661692, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1787087, Length=217, Percent_Identity=24.8847926267281, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786873, Length=208, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787086, Length=221, Percent_Identity=24.4343891402715, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786874, Length=234, Percent_Identity=20.5128205128205, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87082239, Length=168, Percent_Identity=27.3809523809524, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788645, Length=200, Percent_Identity=24.5, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25009; Mature: 25009

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNYEFHWNVVFDAFPQLLSGAFTTIHVSVLSMLLGIVIAVLLALGKMSDSKVFYNMANI
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
WIETARNLPALFLIYMAYFGLGAYGIHLSPYFSVFSALVFINAGYLAETFRGGFQSIPTT
HHHHHHCCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCHHHHHHHHCHHHCCCCH
QYSAAKSLGMNSLKVYRHVILPQMFRRIYHPMTNQFVWSILMSSLGILVGMNELSGETQR
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHH
LQSTSFRTLEFFIVAAAMYFVITKLVLLASGLIAKKVFKGELS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDNYEFHWNVVFDAFPQLLSGAFTTIHVSVLSMLLGIVIAVLLALGKMSDSKVFYNMANI
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
WIETARNLPALFLIYMAYFGLGAYGIHLSPYFSVFSALVFINAGYLAETFRGGFQSIPTT
HHHHHHCCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCHHHHHHHHCHHHCCCCH
QYSAAKSLGMNSLKVYRHVILPQMFRRIYHPMTNQFVWSILMSSLGILVGMNELSGETQR
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHH
LQSTSFRTLEFFIVAAAMYFVITKLVLLASGLIAKKVFKGELS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-glutamine [Periplasm]; H2O [C]

Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732218; 11743193; 11743194 [H]