| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is msrA [H]
Identifier: 119945183
GI number: 119945183
Start: 1779616
End: 1780164
Strand: Reverse
Name: msrA [H]
Synonym: Ping_1447
Alternate gene names: 119945183
Gene position: 1780164-1779616 (Counterclockwise)
Preceding gene: 119945189
Following gene: 119945173
Centisome position: 39.04
GC content: 40.8
Gene sequence:
>549_bases ATGGCAATTTCAACAGCAACTTTTGCAGGAGGATGTTTTTGGTGTATGGAAGCGGCTTTCAATGCTTTAAAGGGCGTGAA GAGTGCAGTTTCCGGATACACAGGCGGAAAAACGGATTCACCCACTTATGCAGATATTTGCACTGGTACAAGCGGGCATG CTGAAGTGGTGCAAATCACATTTGATGATTCAGTCATCAGTTACGCAGAATTATTAACTATTTTTTTCAGTCTGCATGAT GCGACACAATTAAACCGCCAGGGTCATGATATCGGCACACAGTATCGCTCTGCTATTTTTTATCACGATCTCGCGCAAAA GCAATCAGCCTTAGAATTTATCAACACCCTTGAACAACAGGCTGTATTGACCGACAGTATCAAAACCACCATTGAAAAAT TAGAAACATTTTACCCCGCTGAAGATTATCATCAGGGTTACTTTCTTAAAAATCCGGGACAAGGTTACTGTTCTATGGTG ATTCAGCCTAAATTTAATAAATTTAAAGCAACATACCAAGCCGCATTAAAAGAAGAGCGCGGCAGTTAA
Upstream 100 bases:
>100_bases TAAAGATATCGGCAACATTTAGCAGGTTAATTTAAAAAATTAAAATGGATTGTTATTATATCAATATGCTACCTTTAACA ATTTAATACGGAGTATCAAA
Downstream 100 bases:
>100_bases CCGATAATGGTTAACCGGTATTAATTAAAGACCAGCACTGGCCTTGCGATAGTGAGCAAACACCACCAGCAAGATACCAG TGCAGACTAATGCGGCGGAG
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MAISTATFAGGCFWCMEAAFNALKGVKSAVSGYTGGKTDSPTYADICTGTSGHAEVVQITFDDSVISYAELLTIFFSLHD ATQLNRQGHDIGTQYRSAIFYHDLAQKQSALEFINTLEQQAVLTDSIKTTIEKLETFYPAEDYHQGYFLKNPGQGYCSMV IQPKFNKFKATYQAALKEERGS
Sequences:
>Translated_182_residues MAISTATFAGGCFWCMEAAFNALKGVKSAVSGYTGGKTDSPTYADICTGTSGHAEVVQITFDDSVISYAELLTIFFSLHD ATQLNRQGHDIGTQYRSAIFYHDLAQKQSALEFINTLEQQAVLTDSIKTTIEKLETFYPAEDYHQGYFLKNPGQGYCSMV IQPKFNKFKATYQAALKEERGS >Mature_181_residues AISTATFAGGCFWCMEAAFNALKGVKSAVSGYTGGKTDSPTYADICTGTSGHAEVVQITFDDSVISYAELLTIFFSLHDA TQLNRQGHDIGTQYRSAIFYHDLAQKQSALEFINTLEQQAVLTDSIKTTIEKLETFYPAEDYHQGYFLKNPGQGYCSMVI QPKFNKFKATYQAALKEERGS
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=158, Percent_Identity=46.2025316455696, Blast_Score=137, Evalue=8e-33, Organism=Homo sapiens, GI208609995, Length=158, Percent_Identity=46.2025316455696, Blast_Score=136, Evalue=1e-32, Organism=Homo sapiens, GI208609993, Length=113, Percent_Identity=46.0176991150442, Blast_Score=93, Evalue=1e-19, Organism=Escherichia coli, GI1790665, Length=153, Percent_Identity=46.4052287581699, Blast_Score=135, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17533973, Length=148, Percent_Identity=39.1891891891892, Blast_Score=95, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6320881, Length=158, Percent_Identity=39.873417721519, Blast_Score=104, Evalue=6e-24, Organism=Drosophila melanogaster, GI24664627, Length=166, Percent_Identity=40.3614457831325, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI24664631, Length=166, Percent_Identity=39.7590361445783, Blast_Score=104, Evalue=3e-23, Organism=Drosophila melanogaster, GI45553131, Length=159, Percent_Identity=39.622641509434, Blast_Score=101, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 20093; Mature: 19961
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISTATFAGGCFWCMEAAFNALKGVKSAVSGYTGGKTDSPTYADICTGTSGHAEVVQIT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCEEEEEE FDDSVISYAELLTIFFSLHDATQLNRQGHDIGTQYRSAIFYHDLAQKQSALEFINTLEQQ ECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVLTDSIKTTIEKLETFYPAEDYHQGYFLKNPGQGYCSMVIQPKFNKFKATYQAALKEER HHHHHHHHHHHHHHHHHCCCCHHCCCEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHC GS CC >Mature Secondary Structure AISTATFAGGCFWCMEAAFNALKGVKSAVSGYTGGKTDSPTYADICTGTSGHAEVVQIT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCEEEEEE FDDSVISYAELLTIFFSLHDATQLNRQGHDIGTQYRSAIFYHDLAQKQSALEFINTLEQQ ECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVLTDSIKTTIEKLETFYPAEDYHQGYFLKNPGQGYCSMVIQPKFNKFKATYQAALKEER HHHHHHHHHHHHHHHHHCCCCHHCCCEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHC GS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA