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The map label for this gene is nrdR

Identifier: 119945175

GI number: 119945175

Start: 1773119

End: 1773574

Strand: Direct

Name: nrdR

Synonym: Ping_1439

Alternate gene names: 119945175

Gene position: 1773119-1773574 (Clockwise)

Preceding gene: 119945174

Following gene: 119945176

Centisome position: 38.89

GC content: 43.42

Gene sequence:

>456_bases
ATGTACTGTCCTTTTTGTAATGCTCAAGATACTAAAGTTATCGACTCACGCTTAGTTTCAGAAGGATCTCAAGTTCGTCG
CCGGCGCAGCTGCAATGAATGTAATGAACGTTTTACCACCTATGAATTTGCCGAACTGTTGATGCCGCGTTTGATTAAGT
CCGATGGCCGTCGTGAACCCTTTAATGATGACAAATTGCTGGTCGGTATTAACCGTGCCTTGGAAAAAAGACCCGTGAGT
CTGGAGGATATTGATGCTGCGGTTAACAAACTTAAATCAACCCTGCGGGCAACGGGCGAGCGTGAAGTGACTTCTAAAAT
AGTCGGTGAACTGGTTATGGAATTACTTAAGGGGTTAGATAAAATTGCCTATATCCGTTTCGCGTCGGTTTACCGCTCCT
TTAAAGATGTTAAAGAGTTTGGTGAGGAAATAGCCAAGCTTGAGACTGATTTTTAG

Upstream 100 bases:

>100_bases
TATTACACCTTGAAATTAAATTCATAGTAAATTTGTGATATTTGTCAATAGATCCAGTCAACTTTTAAGGTTGATTAATT
CTGAATAAGAGTGAGATTAA

Downstream 100 bases:

>100_bases
CCTAATGGCATCACACTTGTTAGCATAAAATTTTTACTGTTTTTACTCTTTTTAATGTAGAAGATTGAATATTAATGAAC
ACAACGGCTTTTTCAGACTT

Product: ATP-cone domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MYCPFCNAQDTKVIDSRLVSEGSQVRRRRSCNECNERFTTYEFAELLMPRLIKSDGRREPFNDDKLLVGINRALEKRPVS
LEDIDAAVNKLKSTLRATGEREVTSKIVGELVMELLKGLDKIAYIRFASVYRSFKDVKEFGEEIAKLETDF

Sequences:

>Translated_151_residues
MYCPFCNAQDTKVIDSRLVSEGSQVRRRRSCNECNERFTTYEFAELLMPRLIKSDGRREPFNDDKLLVGINRALEKRPVS
LEDIDAAVNKLKSTLRATGEREVTSKIVGELVMELLKGLDKIAYIRFASVYRSFKDVKEFGEEIAKLETDF
>Mature_151_residues
MYCPFCNAQDTKVIDSRLVSEGSQVRRRRSCNECNERFTTYEFAELLMPRLIKSDGRREPFNDDKLLVGINRALEKRPVS
LEDIDAAVNKLKSTLRATGEREVTSKIVGELVMELLKGLDKIAYIRFASVYRSFKDVKEFGEEIAKLETDF

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain

Homologues:

Organism=Escherichia coli, GI1786615, Length=148, Percent_Identity=72.2972972972973, Blast_Score=222, Evalue=7e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDR_PSYIN (A1SUU1)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_942855.1
- STRING:   A1SUU1
- GeneID:   4625501
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_1439
- eggNOG:   COG1327
- HOGENOM:   HBG351755
- OMA:   FASVYRD
- PhylomeDB:   A1SUU1
- BioCyc:   PING357804:PING_1439-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_00440
- InterPro:   IPR005144
- InterPro:   IPR003796
- TIGRFAMs:   TIGR00244

Pfam domain/function: PF03477 ATP-cone

EC number: NA

Molecular weight: Translated: 17392; Mature: 17392

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCPFCNAQDTKVIDSRLVSEGSQVRRRRSCNECNERFTTYEFAELLMPRLIKSDGRREP
CCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FNDDKLLVGINRALEKRPVSLEDIDAAVNKLKSTLRATGEREVTSKIVGELVMELLKGLD
CCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KIAYIRFASVYRSFKDVKEFGEEIAKLETDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYCPFCNAQDTKVIDSRLVSEGSQVRRRRSCNECNERFTTYEFAELLMPRLIKSDGRREP
CCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FNDDKLLVGINRALEKRPVSLEDIDAAVNKLKSTLRATGEREVTSKIVGELVMELLKGLD
CCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KIAYIRFASVYRSFKDVKEFGEEIAKLETDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA