| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945171
Identifier: 119945171
GI number: 119945171
Start: 1766946
End: 1767812
Strand: Direct
Name: 119945171
Synonym: Ping_1435
Alternate gene names: NA
Gene position: 1766946-1767812 (Clockwise)
Preceding gene: 119945169
Following gene: 119945172
Centisome position: 38.75
GC content: 39.56
Gene sequence:
>867_bases ATGAAAAAAAATCTTTTAGCGGTACTGGTTGCCGGTACTTTTATGGTTGCCTGTAATAACAGCGACTCGACGTCAAGCAC AGCAATTAAAGCCTATGATGGTCCGGTTCAGTTTGCAGCTGTGGCATATGATTGTGGTGACGACACTGCCAATAATCCAA TAAAAGGCGACTCAGGTGTGACTGGATTTGATGGTAGTGTTAGCACTAACGTTCCTACACTCCTTAATGAACCAAATTTA TGTAGAATCGTTGTGACGGGTACTCCTACAGCAATTGATACCTCTAACGGTAAATTAATGCCTGATATTGAATATGTTAT CCCTAAAGGGTTATTAGCTAAAGGTAAGGGTATTACAGCGGGTCCTTTCACCACATTGATTGATGCAGAGATGAAAGCTA ATAACAAAAGCGCCACTGATGCTGCTACATCGGTTGTTACTGCTTTATATGGCGAAATTCTTATCAACAATGGTGTTGAT CCATTAGAGATGGCTCGTGATATGGAAGGTACGATCAATAAATTAAAAGCAGTTAATTCACCTTTGGTGGCTTCAATAAT CGCAACTAACAACGTGACTAGTGATGTGCTTGTTTATTCGAAGACTAATACGGTAGACCTTGCAACAATTATCAAAACCA GTAAAGCGGTAGCAGCACAAGTAATTACTGTAAATCCTAATTATCCTAACGTTGACGGTGATGCTACAAAGGTTAAAGTT GCGACTTTTAATGTAGGAATTTCTATCACTGAAGCGACAAATAATGGTTATATTAGTACTGTCAGTGAAGTTACGAAGGA TATACCAAAAGCACCAGTAGTAACAGGTGCAACTGGTTCAACAGGTTTAACCGGTGGTGGTAATTAG
Upstream 100 bases:
>100_bases TTAACCACCTAAACTAACCAAAGTTGTAATAAAGTTGTGATAAAGTTGCTGCTTTAAAACAGACATTGATATAAATTTAC TCATTGCAAGGAAGTCAATA
Downstream 100 bases:
>100_bases TCTTGACCTTTTGCCGTTAAGATAGATACCCCTTGAAAGTCACTCTCACCGAGTGACTTTTTTTATTGCAGCACCGTCAT AAAAAAGCTTATTCCAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MKKNLLAVLVAGTFMVACNNSDSTSSTAIKAYDGPVQFAAVAYDCGDDTANNPIKGDSGVTGFDGSVSTNVPTLLNEPNL CRIVVTGTPTAIDTSNGKLMPDIEYVIPKGLLAKGKGITAGPFTTLIDAEMKANNKSATDAATSVVTALYGEILINNGVD PLEMARDMEGTINKLKAVNSPLVASIIATNNVTSDVLVYSKTNTVDLATIIKTSKAVAAQVITVNPNYPNVDGDATKVKV ATFNVGISITEATNNGYISTVSEVTKDIPKAPVVTGATGSTGLTGGGN
Sequences:
>Translated_288_residues MKKNLLAVLVAGTFMVACNNSDSTSSTAIKAYDGPVQFAAVAYDCGDDTANNPIKGDSGVTGFDGSVSTNVPTLLNEPNL CRIVVTGTPTAIDTSNGKLMPDIEYVIPKGLLAKGKGITAGPFTTLIDAEMKANNKSATDAATSVVTALYGEILINNGVD PLEMARDMEGTINKLKAVNSPLVASIIATNNVTSDVLVYSKTNTVDLATIIKTSKAVAAQVITVNPNYPNVDGDATKVKV ATFNVGISITEATNNGYISTVSEVTKDIPKAPVVTGATGSTGLTGGGN >Mature_288_residues MKKNLLAVLVAGTFMVACNNSDSTSSTAIKAYDGPVQFAAVAYDCGDDTANNPIKGDSGVTGFDGSVSTNVPTLLNEPNL CRIVVTGTPTAIDTSNGKLMPDIEYVIPKGLLAKGKGITAGPFTTLIDAEMKANNKSATDAATSVVTALYGEILINNGVD PLEMARDMEGTINKLKAVNSPLVASIIATNNVTSDVLVYSKTNTVDLATIIKTSKAVAAQVITVNPNYPNVDGDATKVKV ATFNVGISITEATNNGYISTVSEVTKDIPKAPVVTGATGSTGLTGGGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29510; Mature: 29510
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNLLAVLVAGTFMVACNNSDSTSSTAIKAYDGPVQFAAVAYDCGDDTANNPIKGDSGV CCCCEEEEEEEEEEEEEECCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCC TGFDGSVSTNVPTLLNEPNLCRIVVTGTPTAIDTSNGKLMPDIEYVIPKGLLAKGKGITA CCCCCCCCCCCCHHCCCCCEEEEEEECCCCEEECCCCCCCCCHHHHCCCCCEECCCCCCC GPFTTLIDAEMKANNKSATDAATSVVTALYGEILINNGVDPLEMARDMEGTINKLKAVNS CCCCEEEECHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCC PLVASIIATNNVTSDVLVYSKTNTVDLATIIKTSKAVAAQVITVNPNYPNVDGDATKVKV CCEEEEEECCCCCCEEEEEECCCCEEEHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEE ATFNVGISITEATNNGYISTVSEVTKDIPKAPVVTGATGSTGLTGGGN EEEEEEEEEEEECCCCEEEEHHHHHHHCCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure MKKNLLAVLVAGTFMVACNNSDSTSSTAIKAYDGPVQFAAVAYDCGDDTANNPIKGDSGV CCCCEEEEEEEEEEEEEECCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCC TGFDGSVSTNVPTLLNEPNLCRIVVTGTPTAIDTSNGKLMPDIEYVIPKGLLAKGKGITA CCCCCCCCCCCCHHCCCCCEEEEEEECCCCEEECCCCCCCCCHHHHCCCCCEECCCCCCC GPFTTLIDAEMKANNKSATDAATSVVTALYGEILINNGVDPLEMARDMEGTINKLKAVNS CCCCEEEECHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCC PLVASIIATNNVTSDVLVYSKTNTVDLATIIKTSKAVAAQVITVNPNYPNVDGDATKVKV CCEEEEEECCCCCCEEEEEECCCCEEEHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEE ATFNVGISITEATNNGYISTVSEVTKDIPKAPVVTGATGSTGLTGGGN EEEEEEEEEEEECCCCEEEEHHHHHHHCCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA