| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945170
Identifier: 119945170
GI number: 119945170
Start: 1764266
End: 1766335
Strand: Reverse
Name: 119945170
Synonym: Ping_1434
Alternate gene names: NA
Gene position: 1766335-1764266 (Counterclockwise)
Preceding gene: 119945173
Following gene: 119945165
Centisome position: 38.74
GC content: 41.21
Gene sequence:
>2070_bases ATGCTCCCTTCAAACCGCACGTCCCTTTGCTTATTGGCCATGTCAATCAGCAGTTTTCAGTGTTATGCCGCACTGGATAA CTTACCTTCTTTACAAAGTTTTACGGGTGCCGTATTAACACCTAATGCGCAGGTGTTGAAAACCGGCAGTGCCTCTTTTT TATATGGCCAGAGTGTTTATAGAAAGTCACAAACTCCCGACCAACACCATATGCTTTTTTCTGTAGGTTTATTCCCGGGC CTTGAAGCAAGCGGGCGCATTGTTGTTCATGATGATTTTGATAGCGCCAGTGATCTTTCAGCTTCACTAAAATACCAATT ACCCTTAATTAAGCAATACACAGGTTTTGACTTGGCCTTTGGCGTGCAGGATTTAGGCGGCGCGGCAAATAACTTTCAAG CCTATTATGCCGTGACTGATTATGAATTTACCGCCCTGCCCGTGCGTTTAAGTGCGGGGGTTGGCAAATCAGAATTAGCC AACGAAATAATGAATGGTCCGTTTGCATCCATTGAATATCAACCCTTTTCTTTTATGCAGCTGACGGCAGAGCATGACAA CACAGAACTGAACGTCGCCGTCAAAGCCTTTACTCCCCCTAAATCATTACCTTTCAACTCTCAGGTCAGCCTGGAATATC AGTTAGCAACGGGACATGAGACCAATCAACAAGCGATGTGGGCAGCTAATTTATCCGTGCCTATTTTGGGTTACAGCGAC CGGGCTTTAGTTAAAAAAGAAAAAAATATAACAGCCTCATTAGAAGATAAATTAGTGATTAAACAGTCAGTACATGAGAC CAGTTCAGTCGCGTCACTTAAAAATGCCTTAAAAGAAGAAGGTTTTCTTAATATTCAAGTGGGCATGGATAAAAACGGTT TATTGATAGCCCTGGAAAACCGCCGATATAATCACAATGAGATAGATGGTATCGGGGTTGCGATGGCGATTATTAGTAAC CATGCCGGCAAGGCAGTCTTTTCTGAACTTGGCAGCGACAATAATGAACAAAATGCCAAACTCATTATGTTAAAAAATGG CATACCTGTTGTTGCTGTAGACACCAATATGCATTGTTACCGTGAATTTATTCTTTCAGGTGATAATTGTGAGCAGCTTA CCTTTACCAGTAGCGGGCTTAGTAAAACCTATCAACAAGCGGATTGGCAGGAAGATAAAATTGAATCCAGTTTTGGCCGC TCGCAGATAATTTTTTCTCCTATGGTTAAACACGCTACAGCAACTGAATTAGGCGTTTATGATTATTCACTCGCCCTTTC TGCTAATCTGGTGACTAACCTATGGCCGGGTTCTGCCATTGATCTGCGTTATACATTACCCTTGACCAACAGTGAAGATT TTGATGATGGAAAATATTGGGGCAATAGCCGATTCCAAAGTGAAATAGATACCGCACTTTTCCATCAGGCATTCGCACTG CCCTTCAATGTGTTAAATCAAACCTCTCTGGGTTATATTAAGTCCGGTTATCAGGGTGTCGCCAATGAAACACTGTGGAA TTCGCCTCAGGGTTATCACTCAATGGGTCTTGAGGCTAACTATTTTGAGCCTACAGATGAAACACTTCTAAATAAAGGAA CTGTCTTGGGCTTTTACCAACTTTCTCTGCCGCAATTAAATTGGCAGTTAAAAGTGCAGGGAGGTGAATTTTGGAATACT GATAGGGGATTTAAAATTTCCTCAATGCATTGGCTGGGTGATGTACGCGTTGATGCCACTTACCAAAATACACAAATGAC TGAAAAAAGTAATTCCCTTCCAGAAGAGTTTGTCTCTATTAATGTCTCTATCCCGCTAACATTTTGGCGTGGTATGAAAC CCGGTTATATTCAATTGAAAGGGATTAATAATTTTAATTACAGCCTGCAGACGCGCATTAATAATGAAGATGGCCATAAT CAGCTCAACACAGGATTAGGGCAAACCGTCTATATAAAACATAATATTGCAGATCAATATTTAAACAGACAGCGTTTATC GCCAAATTACCTGCGCGTAAATTCAGACAGATTAAGAAGTGCTTATCTGAAATATTTAGCAACGCAATAA
Upstream 100 bases:
>100_bases CTGCTCCCGACTGGTTTAAGCTTACTAAGTCACTTAAATAACTAAGACCTTGAAGTCACCTTTATATGAGTGGCTTTTAT TACAAGGATGTAATCAATTT
Downstream 100 bases:
>100_bases GCAGGTCATTAATCCTTAGAGAACAGCAAAAACCATATGATTCCCGAGCTTAATCGGGAGTCGTTAAATTACGGTTATTC CCGAGGTTATATAATTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 689; Mature: 689
Protein sequence:
>689_residues MLPSNRTSLCLLAMSISSFQCYAALDNLPSLQSFTGAVLTPNAQVLKTGSASFLYGQSVYRKSQTPDQHHMLFSVGLFPG LEASGRIVVHDDFDSASDLSASLKYQLPLIKQYTGFDLAFGVQDLGGAANNFQAYYAVTDYEFTALPVRLSAGVGKSELA NEIMNGPFASIEYQPFSFMQLTAEHDNTELNVAVKAFTPPKSLPFNSQVSLEYQLATGHETNQQAMWAANLSVPILGYSD RALVKKEKNITASLEDKLVIKQSVHETSSVASLKNALKEEGFLNIQVGMDKNGLLIALENRRYNHNEIDGIGVAMAIISN HAGKAVFSELGSDNNEQNAKLIMLKNGIPVVAVDTNMHCYREFILSGDNCEQLTFTSSGLSKTYQQADWQEDKIESSFGR SQIIFSPMVKHATATELGVYDYSLALSANLVTNLWPGSAIDLRYTLPLTNSEDFDDGKYWGNSRFQSEIDTALFHQAFAL PFNVLNQTSLGYIKSGYQGVANETLWNSPQGYHSMGLEANYFEPTDETLLNKGTVLGFYQLSLPQLNWQLKVQGGEFWNT DRGFKISSMHWLGDVRVDATYQNTQMTEKSNSLPEEFVSINVSIPLTFWRGMKPGYIQLKGINNFNYSLQTRINNEDGHN QLNTGLGQTVYIKHNIADQYLNRQRLSPNYLRVNSDRLRSAYLKYLATQ
Sequences:
>Translated_689_residues MLPSNRTSLCLLAMSISSFQCYAALDNLPSLQSFTGAVLTPNAQVLKTGSASFLYGQSVYRKSQTPDQHHMLFSVGLFPG LEASGRIVVHDDFDSASDLSASLKYQLPLIKQYTGFDLAFGVQDLGGAANNFQAYYAVTDYEFTALPVRLSAGVGKSELA NEIMNGPFASIEYQPFSFMQLTAEHDNTELNVAVKAFTPPKSLPFNSQVSLEYQLATGHETNQQAMWAANLSVPILGYSD RALVKKEKNITASLEDKLVIKQSVHETSSVASLKNALKEEGFLNIQVGMDKNGLLIALENRRYNHNEIDGIGVAMAIISN HAGKAVFSELGSDNNEQNAKLIMLKNGIPVVAVDTNMHCYREFILSGDNCEQLTFTSSGLSKTYQQADWQEDKIESSFGR SQIIFSPMVKHATATELGVYDYSLALSANLVTNLWPGSAIDLRYTLPLTNSEDFDDGKYWGNSRFQSEIDTALFHQAFAL PFNVLNQTSLGYIKSGYQGVANETLWNSPQGYHSMGLEANYFEPTDETLLNKGTVLGFYQLSLPQLNWQLKVQGGEFWNT DRGFKISSMHWLGDVRVDATYQNTQMTEKSNSLPEEFVSINVSIPLTFWRGMKPGYIQLKGINNFNYSLQTRINNEDGHN QLNTGLGQTVYIKHNIADQYLNRQRLSPNYLRVNSDRLRSAYLKYLATQ >Mature_689_residues MLPSNRTSLCLLAMSISSFQCYAALDNLPSLQSFTGAVLTPNAQVLKTGSASFLYGQSVYRKSQTPDQHHMLFSVGLFPG LEASGRIVVHDDFDSASDLSASLKYQLPLIKQYTGFDLAFGVQDLGGAANNFQAYYAVTDYEFTALPVRLSAGVGKSELA NEIMNGPFASIEYQPFSFMQLTAEHDNTELNVAVKAFTPPKSLPFNSQVSLEYQLATGHETNQQAMWAANLSVPILGYSD RALVKKEKNITASLEDKLVIKQSVHETSSVASLKNALKEEGFLNIQVGMDKNGLLIALENRRYNHNEIDGIGVAMAIISN HAGKAVFSELGSDNNEQNAKLIMLKNGIPVVAVDTNMHCYREFILSGDNCEQLTFTSSGLSKTYQQADWQEDKIESSFGR SQIIFSPMVKHATATELGVYDYSLALSANLVTNLWPGSAIDLRYTLPLTNSEDFDDGKYWGNSRFQSEIDTALFHQAFAL PFNVLNQTSLGYIKSGYQGVANETLWNSPQGYHSMGLEANYFEPTDETLLNKGTVLGFYQLSLPQLNWQLKVQGGEFWNT DRGFKISSMHWLGDVRVDATYQNTQMTEKSNSLPEEFVSINVSIPLTFWRGMKPGYIQLKGINNFNYSLQTRINNEDGHN QLNTGLGQTVYIKHNIADQYLNRQRLSPNYLRVNSDRLRSAYLKYLATQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76698; Mature: 76698
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPSNRTSLCLLAMSISSFQCYAALDNLPSLQSFTGAVLTPNAQVLKTGSASFLYGQSVY CCCCCCCCEEEEEECCCCEEEEEHHCCCCCHHHCCCEEECCCCCEEECCCCCEEECHHHH RKSQTPDQHHMLFSVGLFPGLEASGRIVVHDDFDSASDLSASLKYQLPLIKQYTGFDLAF HCCCCCCHHEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEECCHHHHCCCCEEEE GVQDLGGAANNFQAYYAVTDYEFTALPVRLSAGVGKSELANEIMNGPFASIEYQPFSFMQ CHHHHCCCCCCCEEEEEEECCEEEEEEEEEECCCCHHHHHHHHHCCCCCEEEECCCEEEE LTAEHDNTELNVAVKAFTPPKSLPFNSQVSLEYQLATGHETNQQAMWAANLSVPILGYSD EEECCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCEEEECCCC RALVKKEKNITASLEDKLVIKQSVHETSSVASLKNALKEEGFLNIQVGMDKNGLLIALEN CHHEEECCCCEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECC RRYNHNEIDGIGVAMAIISNHAGKAVFSELGSDNNEQNAKLIMLKNGIPVVAVDTNMHCY CCCCCCCCCCHHHEEEEHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCEEEEEECCHHHH REFILSGDNCEQLTFTSSGLSKTYQQADWQEDKIESSFGRSQIIFSPMVKHATATELGVY HHHHCCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHCCCCEEEEHHHHHHCCHHHCCEE DYSLALSANLVTNLWPGSAIDLRYTLPLTNSEDFDDGKYWGNSRFQSEIDTALFHQAFAL EEEEEEECCHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC PFNVLNQTSLGYIKSGYQGVANETLWNSPQGYHSMGLEANYFEPTDETLLNKGTVLGFYQ CHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCEEEEEE LSLPQLNWQLKVQGGEFWNTDRGFKISSMHWLGDVRVDATYQNTQMTEKSNSLPEEFVSI EECCCCCEEEEECCCCEECCCCCEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCHHEEE NVSIPLTFWRGMKPGYIQLKGINNFNYSLQTRINNEDGHNQLNTGLGQTVYIKHNIADQY EEEEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHCCCCCEEEEEECCHHHH LNRQRLSPNYLRVNSDRLRSAYLKYLATQ HHHHCCCCCEEEECHHHHHHHHHHHHCCC >Mature Secondary Structure MLPSNRTSLCLLAMSISSFQCYAALDNLPSLQSFTGAVLTPNAQVLKTGSASFLYGQSVY CCCCCCCCEEEEEECCCCEEEEEHHCCCCCHHHCCCEEECCCCCEEECCCCCEEECHHHH RKSQTPDQHHMLFSVGLFPGLEASGRIVVHDDFDSASDLSASLKYQLPLIKQYTGFDLAF HCCCCCCHHEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEECCHHHHCCCCEEEE GVQDLGGAANNFQAYYAVTDYEFTALPVRLSAGVGKSELANEIMNGPFASIEYQPFSFMQ CHHHHCCCCCCCEEEEEEECCEEEEEEEEEECCCCHHHHHHHHHCCCCCEEEECCCEEEE LTAEHDNTELNVAVKAFTPPKSLPFNSQVSLEYQLATGHETNQQAMWAANLSVPILGYSD EEECCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCEEEECCCC RALVKKEKNITASLEDKLVIKQSVHETSSVASLKNALKEEGFLNIQVGMDKNGLLIALEN CHHEEECCCCEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECC RRYNHNEIDGIGVAMAIISNHAGKAVFSELGSDNNEQNAKLIMLKNGIPVVAVDTNMHCY CCCCCCCCCCHHHEEEEHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCEEEEEECCHHHH REFILSGDNCEQLTFTSSGLSKTYQQADWQEDKIESSFGRSQIIFSPMVKHATATELGVY HHHHCCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHCCCCEEEEHHHHHHCCHHHCCEE DYSLALSANLVTNLWPGSAIDLRYTLPLTNSEDFDDGKYWGNSRFQSEIDTALFHQAFAL EEEEEEECCHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC PFNVLNQTSLGYIKSGYQGVANETLWNSPQGYHSMGLEANYFEPTDETLLNKGTVLGFYQ CHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCEEEEEE LSLPQLNWQLKVQGGEFWNTDRGFKISSMHWLGDVRVDATYQNTQMTEKSNSLPEEFVSI EECCCCCEEEEECCCCEECCCCCEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCHHEEE NVSIPLTFWRGMKPGYIQLKGINNFNYSLQTRINNEDGHNQLNTGLGQTVYIKHNIADQY EEEEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHCCCCCEEEEEECCHHHH LNRQRLSPNYLRVNSDRLRSAYLKYLATQ HHHHCCCCCEEEECHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA