| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945147
Identifier: 119945147
GI number: 119945147
Start: 1731342
End: 1732814
Strand: Direct
Name: 119945147
Synonym: Ping_1411
Alternate gene names: NA
Gene position: 1731342-1732814 (Clockwise)
Preceding gene: 119945146
Following gene: 119945149
Centisome position: 37.97
GC content: 45.28
Gene sequence:
>1473_bases GTGGAAAGTCAAAAGAAACAGGTAAATAAAAGCAGTCAGTTTAATGTTGGAATAGTTGGCGGTGGTATTGCGGGATCAAG TCTCGCGTTATATTTAAGTGAATTAGGGATAAATGTCTCCTTGCTTGAAAAAGGAGAGGGTTTAGTTAATGGACCTCCTA TTTGCCATCTGCATGCGGGTGGCAATTTCTACCGGGAAATTTCCGAACAGCAATGTTTGACGCTCCTTGCGCAGTCGATT GATCTGTTGCGTTTATATCCCTTTGCAGCCGACTACCGACCAACGGTATTGGCGGTACCCAAACATGATGACGGCACGGT CGATGAGCTGCTCCCGCGTCTGCATAAACTGCAGTTAGAGTACCAGCGTTTGATTGACGAGAATCCTGATAATAAAGTGC TCGGTGAAAGCCGGGATTACTTTCGTTTATTTGAACGCGAGCAGCTGGAGGCATTGGCGTTGCAGGAGCCCAGTCAAGAT CCTCAGAGCTTAGAGCAGTGGATGATTCCCATTGCTAAATATGTTGATTTGGATAAGCTTAAATTTCCGCTGATCCTGGT TCAAGAATTCGGCTTGAATACCTTTCGTTTAGGGGCCGGCTGCACACTCTCTTTGCAGAAAAATCCGCATTGTCAATTAC TCACCAACTCCTTCGTTACCAACATTATCGCTTCTGAGACAGGCCAATCCTGGCTGGTAGACTACCAACAGGAAGGGGTA AATAAACAGGCTGAATTTGATTATTTAATTAATGCAGCGGGTTTTAGAAGCGGTAAGATTGATGACATGTTAGGTTTTAA ACGCCAGCGGCTGGTCGAGTTTAAGGCAGCTTATATTGCGCGCTGGTCAGACTCTGATTGTCTGTGGCCGGAAGTTGTTT TTCATGGAAAACGGGGTACCCCTAATGGCATGGCGCAATTTACGCCTTATCCCGGCGGCTACTTTCAGTTGCATGGTATG ACTGGTGATATTACCCTGTTCGATGAGGGTTTGGTTAATAGCAGTGAGCAAAGTGCGCAACCAAAATTAGCCGAAAAATT TCTCAAAAAAATCGACTATAAATGGTCCGAGCAGGAGATGGTTACCCGTACTGACCGTTCTATAGAACTTCTTGGTTCTT ATATTCCAAGTTTTAAGTCTGCGAAAATCGGTGCTAAACCCTTATTTGGCGCACAGCAAATACCCGGCGGCGATCCAACA TTAAGAGCGACAGATGTCTCTTTTGTCAATGAAAGATATGCGCGTTGCGAAGCCGTGAAAGCCTCTTCTGTTTTAACCTG CGCAGATGAGATTGTTAAGCAGATGTCCGCTTGTTATTTAATCGATCCAAGCATCAAACCGACCCGTTCTTTTCCCGTCA CCCAAAGCATTAGCGAGGAGGAAATCAAGGAGCAGGCGGAAAAATCAGCACAGCGACGTGATTATCCTTTGCCCTTAGCA CATCTTAATGTTGCAAAACTTCCATTGACCTAA
Upstream 100 bases:
>100_bases TCCCGAAGCTGTTTTTGATGATTTTTCTGATATTGTCGCAACACTCAGTTAATACGTCAGAGCATTTTTTTAGAAACACA ATAAATTTTTACGGGGTCAA
Downstream 100 bases:
>100_bases GGGGTGCGAGCTGTCGGTTTTCAGCTTTTGGCTTTCGAGTATTCGAATCAAAAACTGTGTTGGCCAATCATTGCCGGGCT TTGATGACTGCTGAATAAAC
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Exported Oxidoreductase; Oxidoreductase
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MESQKKQVNKSSQFNVGIVGGGIAGSSLALYLSELGINVSLLEKGEGLVNGPPICHLHAGGNFYREISEQQCLTLLAQSI DLLRLYPFAADYRPTVLAVPKHDDGTVDELLPRLHKLQLEYQRLIDENPDNKVLGESRDYFRLFEREQLEALALQEPSQD PQSLEQWMIPIAKYVDLDKLKFPLILVQEFGLNTFRLGAGCTLSLQKNPHCQLLTNSFVTNIIASETGQSWLVDYQQEGV NKQAEFDYLINAAGFRSGKIDDMLGFKRQRLVEFKAAYIARWSDSDCLWPEVVFHGKRGTPNGMAQFTPYPGGYFQLHGM TGDITLFDEGLVNSSEQSAQPKLAEKFLKKIDYKWSEQEMVTRTDRSIELLGSYIPSFKSAKIGAKPLFGAQQIPGGDPT LRATDVSFVNERYARCEAVKASSVLTCADEIVKQMSACYLIDPSIKPTRSFPVTQSISEEEIKEQAEKSAQRRDYPLPLA HLNVAKLPLT
Sequences:
>Translated_490_residues MESQKKQVNKSSQFNVGIVGGGIAGSSLALYLSELGINVSLLEKGEGLVNGPPICHLHAGGNFYREISEQQCLTLLAQSI DLLRLYPFAADYRPTVLAVPKHDDGTVDELLPRLHKLQLEYQRLIDENPDNKVLGESRDYFRLFEREQLEALALQEPSQD PQSLEQWMIPIAKYVDLDKLKFPLILVQEFGLNTFRLGAGCTLSLQKNPHCQLLTNSFVTNIIASETGQSWLVDYQQEGV NKQAEFDYLINAAGFRSGKIDDMLGFKRQRLVEFKAAYIARWSDSDCLWPEVVFHGKRGTPNGMAQFTPYPGGYFQLHGM TGDITLFDEGLVNSSEQSAQPKLAEKFLKKIDYKWSEQEMVTRTDRSIELLGSYIPSFKSAKIGAKPLFGAQQIPGGDPT LRATDVSFVNERYARCEAVKASSVLTCADEIVKQMSACYLIDPSIKPTRSFPVTQSISEEEIKEQAEKSAQRRDYPLPLA HLNVAKLPLT >Mature_490_residues MESQKKQVNKSSQFNVGIVGGGIAGSSLALYLSELGINVSLLEKGEGLVNGPPICHLHAGGNFYREISEQQCLTLLAQSI DLLRLYPFAADYRPTVLAVPKHDDGTVDELLPRLHKLQLEYQRLIDENPDNKVLGESRDYFRLFEREQLEALALQEPSQD PQSLEQWMIPIAKYVDLDKLKFPLILVQEFGLNTFRLGAGCTLSLQKNPHCQLLTNSFVTNIIASETGQSWLVDYQQEGV NKQAEFDYLINAAGFRSGKIDDMLGFKRQRLVEFKAAYIARWSDSDCLWPEVVFHGKRGTPNGMAQFTPYPGGYFQLHGM TGDITLFDEGLVNSSEQSAQPKLAEKFLKKIDYKWSEQEMVTRTDRSIELLGSYIPSFKSAKIGAKPLFGAQQIPGGDPT LRATDVSFVNERYARCEAVKASSVLTCADEIVKQMSACYLIDPSIKPTRSFPVTQSISEEEIKEQAEKSAQRRDYPLPLA HLNVAKLPLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54853; Mature: 54853
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESQKKQVNKSSQFNVGIVGGGIAGSSLALYLSELGINVSLLEKGEGLVNGPPICHLHAG CCCHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECC GNFYREISEQQCLTLLAQSIDLLRLYPFAADYRPTVLAVPKHDDGTVDELLPRLHKLQLE CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH YQRLIDENPDNKVLGESRDYFRLFEREQLEALALQEPSQDPQSLEQWMIPIAKYVDLDKL HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHC KFPLILVQEFGLNTFRLGAGCTLSLQKNPHCQLLTNSFVTNIIASETGQSWLVDYQQEGV CCCEEEEECCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC NKQAEFDYLINAAGFRSGKIDDMLGFKRQRLVEFKAAYIARWSDSDCLWPEVVFHGKRGT CCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHEECCCCC PNGMAQFTPYPGGYFQLHGMTGDITLFDEGLVNSSEQSAQPKLAEKFLKKIDYKWSEQEM CCCCCEECCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHH VTRTDRSIELLGSYIPSFKSAKIGAKPLFGAQQIPGGDPTLRATDVSFVNERYARCEAVK HHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHH ASSVLTCADEIVKQMSACYLIDPSIKPTRSFPVTQSISEEEIKEQAEKSAQRRDYPLPLA HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHH HLNVAKLPLT HCCEECCCCC >Mature Secondary Structure MESQKKQVNKSSQFNVGIVGGGIAGSSLALYLSELGINVSLLEKGEGLVNGPPICHLHAG CCCHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECC GNFYREISEQQCLTLLAQSIDLLRLYPFAADYRPTVLAVPKHDDGTVDELLPRLHKLQLE CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH YQRLIDENPDNKVLGESRDYFRLFEREQLEALALQEPSQDPQSLEQWMIPIAKYVDLDKL HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHC KFPLILVQEFGLNTFRLGAGCTLSLQKNPHCQLLTNSFVTNIIASETGQSWLVDYQQEGV CCCEEEEECCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC NKQAEFDYLINAAGFRSGKIDDMLGFKRQRLVEFKAAYIARWSDSDCLWPEVVFHGKRGT CCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHEECCCCC PNGMAQFTPYPGGYFQLHGMTGDITLFDEGLVNSSEQSAQPKLAEKFLKKIDYKWSEQEM CCCCCEECCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHH VTRTDRSIELLGSYIPSFKSAKIGAKPLFGAQQIPGGDPTLRATDVSFVNERYARCEAVK HHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHH ASSVLTCADEIVKQMSACYLIDPSIKPTRSFPVTQSISEEEIKEQAEKSAQRRDYPLPLA HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHH HLNVAKLPLT HCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA