| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945145
Identifier: 119945145
GI number: 119945145
Start: 1729543
End: 1730406
Strand: Direct
Name: 119945145
Synonym: Ping_1409
Alternate gene names: NA
Gene position: 1729543-1730406 (Clockwise)
Preceding gene: 119945144
Following gene: 119945146
Centisome position: 37.93
GC content: 40.16
Gene sequence:
>864_bases TTGTCCCTTTTAACCTGCAGAGAGTTAATCCGCACAGAGTTAACCGGGAACGAATTAACCTGGATTACTGCACAACAAAG TGATCGGCTCGTGAGCATTGAGCCGCTTGTGCAGGCGCTGACCAATGTGGTTTTTTTGTTAACCTTAGCCAATAATAAAA AAATCATTTTCAAACGCTTAAACCTGAGTGCAAGAGATATCAGTGATAGAAAGTGTGAATTCAAGGTTGATAATCTTGCC ACGCTTGCAGGTTTGACACCTAAGGTTATTGCCTGTTGCACGCGCTATAAATTGCAGGAATATTTTGTGGGGAAAGAGTT AAGTTGTTTTCCCGTCAATAAAGAGCTCATTAATCTGCTCGCTTTACAGTTGAAAAAAATTCATCAACTACCGGCATTGC ATGCCCAACCACAAAGATTAAGTCTTACCCTAAAGCAGCTTAAACAAAGAATAAAGCTGGACATTGATGAAGCACATTTT TCTGTTATGTTAAAGCGCGCTATCGCCTTGGACAAAGGCAGTGCTAGAAATGTTTTGTGTCATGGTGACTTGTCTTTAAA TAATCTGTTAATCAATGACTGGCAACAGGTAATGATTTTAGATTGGGAGTATGCCACGCTGGCTTGCCCTGCTTATGATT TAGCGTCCTGTATGTGTATAAATCGCCTGGATAACCTGCAGCAGGAAAGCTTAATTGCTGCGTATCATCATTTACACAAT GCTGATATTTTGATCTCATTATCTGCACTGCGCAGGGAGTGCAGATTGTACTTTTCTGTCTTTAGTTATCTTAATGCCTT GTGGGAAAAGTGTTTTTTAGTCAATGAGATATCACAGGCAGAAGATAAAACCTCTGGTGCTTAA
Upstream 100 bases:
>100_bases GATCTGTTAATATCAAATGTGCTGTTGAATTCAGACTTAACAGACAGTACTGTCCTGCTGAAGATTGACCGCATTACCCC CTGGATAACCCCATAATATT
Downstream 100 bases:
>100_bases TTATTGTCTCGTTTTTAAACCCCGTCATGAATCAATATGAATGGCCGCAAAGCAAATTACAAAAAATCACCACCCACATT TCATCAGACTGCTAAACATT
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Aminoglycoside Phosphotransferase
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MSLLTCRELIRTELTGNELTWITAQQSDRLVSIEPLVQALTNVVFLLTLANNKKIIFKRLNLSARDISDRKCEFKVDNLA TLAGLTPKVIACCTRYKLQEYFVGKELSCFPVNKELINLLALQLKKIHQLPALHAQPQRLSLTLKQLKQRIKLDIDEAHF SVMLKRAIALDKGSARNVLCHGDLSLNNLLINDWQQVMILDWEYATLACPAYDLASCMCINRLDNLQQESLIAAYHHLHN ADILISLSALRRECRLYFSVFSYLNALWEKCFLVNEISQAEDKTSGA
Sequences:
>Translated_287_residues MSLLTCRELIRTELTGNELTWITAQQSDRLVSIEPLVQALTNVVFLLTLANNKKIIFKRLNLSARDISDRKCEFKVDNLA TLAGLTPKVIACCTRYKLQEYFVGKELSCFPVNKELINLLALQLKKIHQLPALHAQPQRLSLTLKQLKQRIKLDIDEAHF SVMLKRAIALDKGSARNVLCHGDLSLNNLLINDWQQVMILDWEYATLACPAYDLASCMCINRLDNLQQESLIAAYHHLHN ADILISLSALRRECRLYFSVFSYLNALWEKCFLVNEISQAEDKTSGA >Mature_286_residues SLLTCRELIRTELTGNELTWITAQQSDRLVSIEPLVQALTNVVFLLTLANNKKIIFKRLNLSARDISDRKCEFKVDNLAT LAGLTPKVIACCTRYKLQEYFVGKELSCFPVNKELINLLALQLKKIHQLPALHAQPQRLSLTLKQLKQRIKLDIDEAHFS VMLKRAIALDKGSARNVLCHGDLSLNNLLINDWQQVMILDWEYATLACPAYDLASCMCINRLDNLQQESLIAAYHHLHNA DILISLSALRRECRLYFSVFSYLNALWEKCFLVNEISQAEDKTSGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32703; Mature: 32571
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLTCRELIRTELTGNELTWITAQQSDRLVSIEPLVQALTNVVFLLTLANNKKIIFKRL CCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHEEEEECCCCEEEEEEE NLSARDISDRKCEFKVDNLATLAGLTPKVIACCTRYKLQEYFVGKELSCFPVNKELINLL CCCCCCCCCCCCEEECCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH ALQLKKIHQLPALHAQPQRLSLTLKQLKQRIKLDIDEAHFSVMLKRAIALDKGSARNVLC HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEE HGDLSLNNLLINDWQQVMILDWEYATLACPAYDLASCMCINRLDNLQQESLIAAYHHLHN ECCCCCCHHHHCCCCEEEEEEECHHHEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC ADILISLSALRRECRLYFSVFSYLNALWEKCFLVNEISQAEDKTSGA CHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SLLTCRELIRTELTGNELTWITAQQSDRLVSIEPLVQALTNVVFLLTLANNKKIIFKRL CHHHHHHHHHHHCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHEEEEECCCCEEEEEEE NLSARDISDRKCEFKVDNLATLAGLTPKVIACCTRYKLQEYFVGKELSCFPVNKELINLL CCCCCCCCCCCCEEECCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH ALQLKKIHQLPALHAQPQRLSLTLKQLKQRIKLDIDEAHFSVMLKRAIALDKGSARNVLC HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEE HGDLSLNNLLINDWQQVMILDWEYATLACPAYDLASCMCINRLDNLQQESLIAAYHHLHN ECCCCCCHHHHCCCCEEEEEEECHHHEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC ADILISLSALRRECRLYFSVFSYLNALWEKCFLVNEISQAEDKTSGA CHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA