| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945143
Identifier: 119945143
GI number: 119945143
Start: 1728054
End: 1728830
Strand: Direct
Name: 119945143
Synonym: Ping_1407
Alternate gene names: NA
Gene position: 1728054-1728830 (Clockwise)
Preceding gene: 119945142
Following gene: 119945144
Centisome position: 37.9
GC content: 35.01
Gene sequence:
>777_bases ATGAGTGAAAAACATTTTATTTTAGGGGGTGATATTAAAAAGTCACTCAGCGAAGCTCATCACTTCGATATTAAATCTCT TTTTAAAGACGCTTTTGTTATCACCAAAAAGAATTTCCTGTCTCTGGCTGTTGCAAGTTTTGCGACTATCGTTCCCTTGG GCCTTGCATACCTGTATATTTTTCAATCTTTTGGCGAAGCTGATCAGACCATGCAAATGGTACTTAATTATATTATTACT TTATTGGTTGCACCGCCGCTATTAACGGCATTACAAATGATGGGCATTCATCACTCTGTCGGTTTGAAAACGAAAGCGAA TGATCTTTTTAAATACTTTAATCTTATCCTGAAACTATCACTGGCAACAATGATTGTCAGTTTAGTCTCCAATCTTGTTT CGCTGGGGCTAACCCAGGTATTTGGCAGTATTGGCTTACAAATCTCTATTGTTGCTCTGTTATATTTCAATATGGTCTTT TGCCTGGTGAATCCCCTGATTGCAGAAAAAAAATTAGCGCCTTTCTTAGCGATTAAATTATCTTTTAAGATAGTCAATAA AAACTTACTGCAATTTTCTTTTATTTATTTATTATTAATGGTGTTATTTTTTATTGGCATTATTACTTCCGGTATAGGTT TATTGTTCATTTTTCCTTTTTATTTTAATGTCATGGGTATTATTTATCGTCAAGTTTGTGGTGTGAGAGTTTTGGCAGTA GAAGGCAGCTCGCCAGCAGATAACGATAATGATCGTAGTTCCGGTTTTGAGGCTTAA
Upstream 100 bases:
>100_bases AGAGCGGCATTTATAGTTTATACCACAACGGTGATATCTCCTTCTTCGCGCTTGGTATATACAATGAAAAACTTTATTTT ATTTAGGATAATTAGCTTGT
Downstream 100 bases:
>100_bases TTTTACTCAACATAATTAATAAAAATATAAAGGAAGATAATAATGCGCTTGGGATTTTTTTTGGTTTTATTGCTAACAAT GACGACAACAACAAGTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSEKHFILGGDIKKSLSEAHHFDIKSLFKDAFVITKKNFLSLAVASFATIVPLGLAYLYIFQSFGEADQTMQMVLNYIIT LLVAPPLLTALQMMGIHHSVGLKTKANDLFKYFNLILKLSLATMIVSLVSNLVSLGLTQVFGSIGLQISIVALLYFNMVF CLVNPLIAEKKLAPFLAIKLSFKIVNKNLLQFSFIYLLLMVLFFIGIITSGIGLLFIFPFYFNVMGIIYRQVCGVRVLAV EGSSPADNDNDRSSGFEA
Sequences:
>Translated_258_residues MSEKHFILGGDIKKSLSEAHHFDIKSLFKDAFVITKKNFLSLAVASFATIVPLGLAYLYIFQSFGEADQTMQMVLNYIIT LLVAPPLLTALQMMGIHHSVGLKTKANDLFKYFNLILKLSLATMIVSLVSNLVSLGLTQVFGSIGLQISIVALLYFNMVF CLVNPLIAEKKLAPFLAIKLSFKIVNKNLLQFSFIYLLLMVLFFIGIITSGIGLLFIFPFYFNVMGIIYRQVCGVRVLAV EGSSPADNDNDRSSGFEA >Mature_257_residues SEKHFILGGDIKKSLSEAHHFDIKSLFKDAFVITKKNFLSLAVASFATIVPLGLAYLYIFQSFGEADQTMQMVLNYIITL LVAPPLLTALQMMGIHHSVGLKTKANDLFKYFNLILKLSLATMIVSLVSNLVSLGLTQVFGSIGLQISIVALLYFNMVFC LVNPLIAEKKLAPFLAIKLSFKIVNKNLLQFSFIYLLLMVLFFIGIITSGIGLLFIFPFYFNVMGIIYRQVCGVRVLAVE GSSPADNDNDRSSGFEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28600; Mature: 28468
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKHFILGGDIKKSLSEAHHFDIKSLFKDAFVITKKNFLSLAVASFATIVPLGLAYLYI CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQSFGEADQTMQMVLNYIITLLVAPPLLTALQMMGIHHSVGLKTKANDLFKYFNLILKLS HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LATMIVSLVSNLVSLGLTQVFGSIGLQISIVALLYFNMVFCLVNPLIAEKKLAPFLAIKL HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFKIVNKNLLQFSFIYLLLMVLFFIGIITSGIGLLFIFPFYFNVMGIIYRQVCGVRVLAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEE EGSSPADNDNDRSSGFEA ECCCCCCCCCCCCCCCCC >Mature Secondary Structure SEKHFILGGDIKKSLSEAHHFDIKSLFKDAFVITKKNFLSLAVASFATIVPLGLAYLYI CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQSFGEADQTMQMVLNYIITLLVAPPLLTALQMMGIHHSVGLKTKANDLFKYFNLILKLS HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LATMIVSLVSNLVSLGLTQVFGSIGLQISIVALLYFNMVFCLVNPLIAEKKLAPFLAIKL HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFKIVNKNLLQFSFIYLLLMVLFFIGIITSGIGLLFIFPFYFNVMGIIYRQVCGVRVLAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEE EGSSPADNDNDRSSGFEA ECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA