Click here to switch to the map view.

The map label for this gene is 119945136

Identifier: 119945136

GI number: 119945136

Start: 1719241

End: 1720266

Strand: Direct

Name: 119945136

Synonym: Ping_1399

Alternate gene names: NA

Gene position: 1719241-1720266 (Clockwise)

Preceding gene: 119945135

Following gene: 119945137

Centisome position: 37.71

GC content: 38.21

Gene sequence:

>1026_bases
ATGGCTAAAAATGAAAATATTGCATCAGTATTAGCATTTGAAAAGAAGTTAGTGCCATCAGACGGTTACATGTATGGCAC
TAACTGGGACAATAAAACCTTGGTGACAGCACTCTCATTAATTGAAAAATCGGTACGTGGCACTATCTCCAACCGTTTAA
AAGCGGCGATAAAAAGTGATCCTGTTAAATTAAATACAGAAGTAGAAAAGGCAAATTTACAAACAATAGATGTTTGTGCA
CTTGCACCCGAGCAAGACACACTGAAATTACATTTTACTTTAAAAATTCTTGGCGGGGTACAGCAGCCATCGGCTTGTAA
TAATGCGCTGTTTAAACAAAGCTATAGCAAAGCAGTTAACAAATATATTGAAAAAGAAGGTTTTAAAGAATTGGGAAAAC
GCTATGCACTTAACTTGGCAAATGCACGCTTTTTATGGCGTAACCGTGTTGGATCAGAAAATATTGAAGTACAAGTTAAT
GCACTGAACAAAGACAGCAAGCAGTCATGGGGGTTTGATGCAACTCAATTTAGCATGCGCAATTTTGATGATGCTAACGC
ACAGGTTCTCGAATTAGGGGATCGCATAGCCAAAGCACTTTCCAGCGAAGATGATTTCTTAATGTTAGAAATTAACTGTT
TTGTGCAGTTAGGTAAAGCGCAAGAAGTTTATCCAAGTGAAGAGTTGGTGTTAGATAAAGGTAAAGGGACAAAAAGTAAA
ATACTTTATGCAGTGAAAGATATTGCAGCCATGCACTCTCAAAAAATTGGTAATGCATTGCGCAGTATTGATACCTGGTA
TCCAGAATTTGTTGAGGTCGAAAAAACAGCTGGTCCGATAGCGATTGAACCTTATGGTGCTGTTACAAATTTAGGTAAAG
CCTATCGTACCCCTAAAGATAAACAGGACTTTTATACCTTTTTTGATAAATGGGCGCGTGGCACTGAGCTTGGGCGGATT
GAGGATGAACACTATGTAATGGCAATATTAGTGCGTGGTGGTGTCTTTGGTGAAAGTGATAAATAA

Upstream 100 bases:

>100_bases
CACAAAATTGCGTGACAAAAACAACTAATCTCTCTCCTATAACAAATCAATTATCAACACTTTTTGATTAATTTATTTTT
AATAATAAGGAATAAATACC

Downstream 100 bases:

>100_bases
GCTGGTGGTTTTTAAGGAAAGAAAATGAAATATTATCTCGATATTACTTTATTGCCAGATATTGAAATCCCGTTAGGTTT
TATTTGGCAGAAAGTATTTC

Product: CRISPR-associated Csy3 family protein

Products: NA

Alternate protein names: CRISPR-Associated Csy3 Family Protein; Csy3 Family CRISPR-Associated Protein; CRISPR-Associated Protein; CRISPR-Associated Protein Family Protein; Crispr-Associated Protein; Crispr-Associated Protein Csy3 Family; CRISPR-Associated Cas5e Family Protein

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MAKNENIASVLAFEKKLVPSDGYMYGTNWDNKTLVTALSLIEKSVRGTISNRLKAAIKSDPVKLNTEVEKANLQTIDVCA
LAPEQDTLKLHFTLKILGGVQQPSACNNALFKQSYSKAVNKYIEKEGFKELGKRYALNLANARFLWRNRVGSENIEVQVN
ALNKDSKQSWGFDATQFSMRNFDDANAQVLELGDRIAKALSSEDDFLMLEINCFVQLGKAQEVYPSEELVLDKGKGTKSK
ILYAVKDIAAMHSQKIGNALRSIDTWYPEFVEVEKTAGPIAIEPYGAVTNLGKAYRTPKDKQDFYTFFDKWARGTELGRI
EDEHYVMAILVRGGVFGESDK

Sequences:

>Translated_341_residues
MAKNENIASVLAFEKKLVPSDGYMYGTNWDNKTLVTALSLIEKSVRGTISNRLKAAIKSDPVKLNTEVEKANLQTIDVCA
LAPEQDTLKLHFTLKILGGVQQPSACNNALFKQSYSKAVNKYIEKEGFKELGKRYALNLANARFLWRNRVGSENIEVQVN
ALNKDSKQSWGFDATQFSMRNFDDANAQVLELGDRIAKALSSEDDFLMLEINCFVQLGKAQEVYPSEELVLDKGKGTKSK
ILYAVKDIAAMHSQKIGNALRSIDTWYPEFVEVEKTAGPIAIEPYGAVTNLGKAYRTPKDKQDFYTFFDKWARGTELGRI
EDEHYVMAILVRGGVFGESDK
>Mature_340_residues
AKNENIASVLAFEKKLVPSDGYMYGTNWDNKTLVTALSLIEKSVRGTISNRLKAAIKSDPVKLNTEVEKANLQTIDVCAL
APEQDTLKLHFTLKILGGVQQPSACNNALFKQSYSKAVNKYIEKEGFKELGKRYALNLANARFLWRNRVGSENIEVQVNA
LNKDSKQSWGFDATQFSMRNFDDANAQVLELGDRIAKALSSEDDFLMLEINCFVQLGKAQEVYPSEELVLDKGKGTKSKI
LYAVKDIAAMHSQKIGNALRSIDTWYPEFVEVEKTAGPIAIEPYGAVTNLGKAYRTPKDKQDFYTFFDKWARGTELGRIE
DEHYVMAILVRGGVFGESDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38176; Mature: 38045

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNENIASVLAFEKKLVPSDGYMYGTNWDNKTLVTALSLIEKSVRGTISNRLKAAIKSD
CCCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVKLNTEVEKANLQTIDVCALAPEQDTLKLHFTLKILGGVQQPSACNNALFKQSYSKAVN
CEEEECCHHHCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
KYIEKEGFKELGKRYALNLANARFLWRNRVGSENIEVQVNALNKDSKQSWGFDATQFSMR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHC
NFDDANAQVLELGDRIAKALSSEDDFLMLEINCFVQLGKAQEVYPSEELVLDKGKGTKSK
CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEECCCCCHHH
ILYAVKDIAAMHSQKIGNALRSIDTWYPEFVEVEKTAGPIAIEPYGAVTNLGKAYRTPKD
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHCCCCEEECCCCHHHHHHHHHCCCCC
KQDFYTFFDKWARGTELGRIEDEHYVMAILVRGGVFGESDK
HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCC
>Mature Secondary Structure 
AKNENIASVLAFEKKLVPSDGYMYGTNWDNKTLVTALSLIEKSVRGTISNRLKAAIKSD
CCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVKLNTEVEKANLQTIDVCALAPEQDTLKLHFTLKILGGVQQPSACNNALFKQSYSKAVN
CEEEECCHHHCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
KYIEKEGFKELGKRYALNLANARFLWRNRVGSENIEVQVNALNKDSKQSWGFDATQFSMR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHC
NFDDANAQVLELGDRIAKALSSEDDFLMLEINCFVQLGKAQEVYPSEELVLDKGKGTKSK
CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEECCCCCHHH
ILYAVKDIAAMHSQKIGNALRSIDTWYPEFVEVEKTAGPIAIEPYGAVTNLGKAYRTPKD
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHCCCCEEECCCCHHHHHHHHHCCCCC
KQDFYTFFDKWARGTELGRIEDEHYVMAILVRGGVFGESDK
HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA