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The map label for this gene is hmrR2 [H]

Identifier: 119945124

GI number: 119945124

Start: 1704246

End: 1704707

Strand: Direct

Name: hmrR2 [H]

Synonym: Ping_1385

Alternate gene names: 119945124

Gene position: 1704246-1704707 (Clockwise)

Preceding gene: 119945123

Following gene: 119945126

Centisome position: 37.38

GC content: 33.12

Gene sequence:

>462_bases
TTGTATTTTGTTAACGATCTAAAAAATCGATATTTAAAAAACAACAAGCTAAAGGAGCCCAGTCATGCTAACTATCAGCC
AAGCAGCCAAGCAGCTCAAGAAACGGGGTTATCTGTCAAATCTATCCGTTATTACGAACAGATAGGTTTAACCAATCCAC
CACCTCGTGGTGAAAATGATTACCGCTATTATCCAAGTGCTTTAATTAAACGACTGCATTTTATAAAAAAAACCAAAGAC
GTAGGCTTTAGTTTAAAAGAAAGTAAAAACTTATTAGCATTATCTGAAAATAGTGGTAGAAGAAGTGCCGATGTAAAAGC
ACTTCTCTCTCAAAAAATTGAAGAATTACAAACAAAAATAAAGAGAGAACAAGCACTGCTAGAGAGTTTAAAAAATATCA
CCCTAAAATGTTGTGGAGATGAAAAGCCAAATTGTCCAATTATTGATGAATTTGCAAATTAA

Upstream 100 bases:

>100_bases
ATTCGTCGATCAAAATATGAAGGACAATATCAAACATAAGCCATCTTGTTGCAGTCGACCACCGCCTGGAAGTACGAAAC
ACAAATAGCGAATAAGTTAA

Downstream 100 bases:

>100_bases
GGGCGAGGTGAAATTCGATAGATTCCGGATTTAGGGTTCCAGAACACTGTTGTTAGCTTTATTGTATAAGCCTAACGCCT
TATAACTATTGAGATTACGA

Product: transcriptional regulator of MerR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MYFVNDLKNRYLKNNKLKEPSHANYQPSSQAAQETGLSVKSIRYYEQIGLTNPPPRGENDYRYYPSALIKRLHFIKKTKD
VGFSLKESKNLLALSENSGRRSADVKALLSQKIEELQTKIKREQALLESLKNITLKCCGDEKPNCPIIDEFAN

Sequences:

>Translated_153_residues
MYFVNDLKNRYLKNNKLKEPSHANYQPSSQAAQETGLSVKSIRYYEQIGLTNPPPRGENDYRYYPSALIKRLHFIKKTKD
VGFSLKESKNLLALSENSGRRSADVKALLSQKIEELQTKIKREQALLESLKNITLKCCGDEKPNCPIIDEFAN
>Mature_153_residues
MYFVNDLKNRYLKNNKLKEPSHANYQPSSQAAQETGLSVKSIRYYEQIGLTNPPPRGENDYRYYPSALIKRLHFIKKTKD
VGFSLKESKNLLALSENSGRRSADVKALLSQKIEELQTKIKREQALLESLKNITLKCCGDEKPNCPIIDEFAN

Specific function: Transcriptional regulator involved in acid tolerance. Binds copper [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786695, Length=124, Percent_Identity=37.9032258064516, Blast_Score=95, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011789
- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 17538; Mature: 17538

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFVNDLKNRYLKNNKLKEPSHANYQPSSQAAQETGLSVKSIRYYEQIGLTNPPPRGEND
CCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
YRYYPSALIKRLHFIKKTKDVGFSLKESKNLLALSENSGRRSADVKALLSQKIEELQTKI
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
KREQALLESLKNITLKCCGDEKPNCPIIDEFAN
HHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYFVNDLKNRYLKNNKLKEPSHANYQPSSQAAQETGLSVKSIRYYEQIGLTNPPPRGEND
CCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
YRYYPSALIKRLHFIKKTKDVGFSLKESKNLLALSENSGRRSADVKALLSQKIEELQTKI
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
KREQALLESLKNITLKCCGDEKPNCPIIDEFAN
HHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]