| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945121
Identifier: 119945121
GI number: 119945121
Start: 1703160
End: 1703528
Strand: Direct
Name: 119945121
Synonym: Ping_1382
Alternate gene names: NA
Gene position: 1703160-1703528 (Clockwise)
Preceding gene: 119945120
Following gene: 119945122
Centisome position: 37.35
GC content: 34.96
Gene sequence:
>369_bases ATGTTCATTATTAACTTGGTTGGAATTGGTTTAATTCTTTTAATAGTCTGGTGGTTTTGGCTTTACTCTCCGAAGAAAAA GCAAAAAATGTCAGCAAATAAAACCAATGGAGAAATAAGTATTGTTGTGCAAGATGGTGTTTATCAACCATCAACAATTG CACTAAGCACAAACGCTGGCACGACACTTAAATTTACACGTAAAGATCCCAGCCCCTGTGCAGCAACGGTCATCTTTCCT GATTTTGAAATAAGTGAGGAATTACCGTTGAATAAACCCATTGAAATTTCACTTCCTATAATGAAAAAAGGGAAATATGT ATTTCACTGTCAAATGCAAATGTACAAAGGTTATCTAGTGGTTGAGTAA
Upstream 100 bases:
>100_bases TGTTATTGCAGGCGCGGCAATGGCATTTTCATCTTTAACCGTGGTCAGTAATGCTAACCGTTTACGGTTTTTTAAACCAC AAGATCATTAGGAGAAAATT
Downstream 100 bases:
>100_bases ATAATATTGCGAATGTTAAGCATTAACAATGCGGTCAACATAAATATTGAGGTAATGACTATGATCAATAAATTTAAGAT GTTTTTATCCACGCCTAAAG
Product: protease
Products: NA
Alternate protein names: Secreted Protein Containing Plastocyanin Domain; Plastocyanin Domain-Containing Protein; Protein Containing Plastocyanin Domain; Copper-Transporting ATPase; Protease; Copper -Translocating P-Type ATPase
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MFIINLVGIGLILLIVWWFWLYSPKKKQKMSANKTNGEISIVVQDGVYQPSTIALSTNAGTTLKFTRKDPSPCAATVIFP DFEISEELPLNKPIEISLPIMKKGKYVFHCQMQMYKGYLVVE
Sequences:
>Translated_122_residues MFIINLVGIGLILLIVWWFWLYSPKKKQKMSANKTNGEISIVVQDGVYQPSTIALSTNAGTTLKFTRKDPSPCAATVIFP DFEISEELPLNKPIEISLPIMKKGKYVFHCQMQMYKGYLVVE >Mature_122_residues MFIINLVGIGLILLIVWWFWLYSPKKKQKMSANKTNGEISIVVQDGVYQPSTIALSTNAGTTLKFTRKDPSPCAATVIFP DFEISEELPLNKPIEISLPIMKKGKYVFHCQMQMYKGYLVVE
Specific function: Unknown
COG id: COG4633
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13845; Mature: 13845
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIINLVGIGLILLIVWWFWLYSPKKKQKMSANKTNGEISIVVQDGVYQPSTIALSTNAG CEEEEHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEEECCCCCCCEEEEECCCC TTLKFTRKDPSPCAATVIFPDFEISEELPLNKPIEISLPIMKKGKYVFHCQMQMYKGYLV CEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECEECCCCEEEEEEEEEECCEEE VE EC >Mature Secondary Structure MFIINLVGIGLILLIVWWFWLYSPKKKQKMSANKTNGEISIVVQDGVYQPSTIALSTNAG CEEEEHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEEECCCCCCCEEEEECCCC TTLKFTRKDPSPCAATVIFPDFEISEELPLNKPIEISLPIMKKGKYVFHCQMQMYKGYLV CEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECEECCCCEEEEEEEEEECCEEE VE EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA