Click here to switch to the map view.

The map label for this gene is yrbG [C]

Identifier: 119945106

GI number: 119945106

Start: 1682538

End: 1683500

Strand: Direct

Name: yrbG [C]

Synonym: Ping_1366

Alternate gene names: 119945106

Gene position: 1682538-1683500 (Clockwise)

Preceding gene: 119945105

Following gene: 119945107

Centisome position: 36.9

GC content: 47.66

Gene sequence:

>963_bases
ATGTTGAATATTTTATTTCTTTTAGCGGGTATAGCCTCACTTACCTGTGGCGGTGAAATATTGATTCGTGGCTCGCTGGC
TGCCGCAAAACGCTTGGGTGTGTCACCTTTGCTAAGCGGTCTAGTTATCGTCGGATTCGGCACTTCAGCGCCAGAGTTAG
TGGTCTCCGTTAATGCTGCTATAGAGGGGCAACCGGACATCGCTATTGGCAACGTTGTTGGCAGCAATATCGGTAATATT
TTATTGATTCTGGGCATTTGCGCGGTGATCACGCCGCTGGCTGTAAAGCCATTGGTACTAAGGCGAGACGCTGCCACTGT
AGTGGCTGCAAGCATATTGTTTCTGATTCTGGTTGGGGGGAGTGCCCTTGGGCGTGCTGATGCCACTATCTTCCTTGTTG
CAATGGTCTCGTACTTAGTGTGGGCATATTGGAGCGAACGCTTTCACGCCGCACCGTCGGGTGAGCTATACCAAGCTGAA
GCAGAAGAACTTTCTGCCACTCCTAAGTCAGTATTATGGACTATAATCGCCGTGGTGCTTGGTTTGTTGCTGTTAATTGG
AGGATCACAAGTTCTGCTGATTGGGGCCATTGGTATTGCAGAGCACTTTAATGTGCCAGAGGCCGTCATCGGCCTGACAT
TGGTTGCAATAGGTACGTCACTTCCTGAATTGTCTATATCGGTGATAGCAGCTATTCGGCGGCACGCTGATGTAGCGGTT
GGAAATATACTCGGAAGTAATATATTCAACTTACTTGGAATTCTGGGAGTGTCATCATTTCTTCAACCACTTCCTGTTCA
TGCAAGAATCTTGCAGTTCGATCAATGGGTTATGCTTGGAACGTCTTTACTCTTGTTTTTATTTTTGTACACGGGAAGCC
GCCTGAGCCGGCTAGAAGGCGGAATACTACTTGGCGGGTACTGTATCTATATCTGGCTAAGTTTTACGGTGTTCAGTGGT
TAA

Upstream 100 bases:

>100_bases
AAACTACTCAGCGCTTTATTTTCGTCACACAGCTTGGTCTAGGCTTCAATGGTGATCCGCCTTTTAAAAGAGTTAATAAC
TCTGTGGGAATATCTGAATT

Downstream 100 bases:

>100_bases
CAAGGAGTCGTCATTATCAACACATTAGTTGAATATCCGTATTTATTGGTGCCGTTAGTCTTTTTTGCCAGAGTAGCTGA
CGTTTCTCTTGGGACATTTA

Product: Na+/Ca+ antiporter, CaCA family protein

Products: Na (I) [Cytoplasm]; Ca (II) [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLNILFLLAGIASLTCGGEILIRGSLAAAKRLGVSPLLSGLVIVGFGTSAPELVVSVNAAIEGQPDIAIGNVVGSNIGNI
LLILGICAVITPLAVKPLVLRRDAATVVAASILFLILVGGSALGRADATIFLVAMVSYLVWAYWSERFHAAPSGELYQAE
AEELSATPKSVLWTIIAVVLGLLLLIGGSQVLLIGAIGIAEHFNVPEAVIGLTLVAIGTSLPELSISVIAAIRRHADVAV
GNILGSNIFNLLGILGVSSFLQPLPVHARILQFDQWVMLGTSLLLFLFLYTGSRLSRLEGGILLGGYCIYIWLSFTVFSG

Sequences:

>Translated_320_residues
MLNILFLLAGIASLTCGGEILIRGSLAAAKRLGVSPLLSGLVIVGFGTSAPELVVSVNAAIEGQPDIAIGNVVGSNIGNI
LLILGICAVITPLAVKPLVLRRDAATVVAASILFLILVGGSALGRADATIFLVAMVSYLVWAYWSERFHAAPSGELYQAE
AEELSATPKSVLWTIIAVVLGLLLLIGGSQVLLIGAIGIAEHFNVPEAVIGLTLVAIGTSLPELSISVIAAIRRHADVAV
GNILGSNIFNLLGILGVSSFLQPLPVHARILQFDQWVMLGTSLLLFLFLYTGSRLSRLEGGILLGGYCIYIWLSFTVFSG
>Mature_320_residues
MLNILFLLAGIASLTCGGEILIRGSLAAAKRLGVSPLLSGLVIVGFGTSAPELVVSVNAAIEGQPDIAIGNVVGSNIGNI
LLILGICAVITPLAVKPLVLRRDAATVVAASILFLILVGGSALGRADATIFLVAMVSYLVWAYWSERFHAAPSGELYQAE
AEELSATPKSVLWTIIAVVLGLLLLIGGSQVLLIGAIGIAEHFNVPEAVIGLTLVAIGTSLPELSISVIAAIRRHADVAV
GNILGSNIFNLLGILGVSSFLQPLPVHARILQFDQWVMLGTSLLLFLFLYTGSRLSRLEGGILLGGYCIYIWLSFTVFSG

Specific function: Unknown

COG id: COG0530

COG function: function code P; Ca2+/Na+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium/potassium/calcium exchanger family [H]

Homologues:

Organism=Escherichia coli, GI1789587, Length=299, Percent_Identity=33.1103678929766, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004481
- InterPro:   IPR004837 [H]

Pfam domain/function: PF01699 Na_Ca_ex [H]

EC number: NA

Molecular weight: Translated: 33404; Mature: 33404

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNILFLLAGIASLTCGGEILIRGSLAAAKRLGVSPLLSGLVIVGFGTSAPELVVSVNAA
CHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCHHHHHHCEEEEECCCCCCCEEEEECCE
IEGQPDIAIGNVVGSNIGNILLILGICAVITPLAVKPLVLRRDAATVVAASILFLILVGG
ECCCCCEEECHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHCC
SALGRADATIFLVAMVSYLVWAYWSERFHAAPSGELYQAEAEELSATPKSVLWTIIAVVL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCHHHHHHHHHHHHH
GLLLLIGGSQVLLIGAIGIAEHFNVPEAVIGLTLVAIGTSLPELSISVIAAIRRHADVAV
HHHHHHCCCEEEEEEEHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
GNILGSNIFNLLGILGVSSFLQPLPVHARILQFDQWVMLGTSLLLFLFLYTGSRLSRLEG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
GILLGGYCIYIWLSFTVFSG
CEEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNILFLLAGIASLTCGGEILIRGSLAAAKRLGVSPLLSGLVIVGFGTSAPELVVSVNAA
CHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCHHHHHHCEEEEECCCCCCCEEEEECCE
IEGQPDIAIGNVVGSNIGNILLILGICAVITPLAVKPLVLRRDAATVVAASILFLILVGG
ECCCCCEEECHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHCC
SALGRADATIFLVAMVSYLVWAYWSERFHAAPSGELYQAEAEELSATPKSVLWTIIAVVL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCHHHHHHHHHHHHH
GLLLLIGGSQVLLIGAIGIAEHFNVPEAVIGLTLVAIGTSLPELSISVIAAIRRHADVAV
HHHHHHCCCEEEEEEEHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
GNILGSNIFNLLGILGVSSFLQPLPVHARILQFDQWVMLGTSLLLFLFLYTGSRLSRLEG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
GILLGGYCIYIWLSFTVFSG
CEEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; Ca (II) [Cytoplasm] [C]

Specific reaction: Na (I) [Periplasm] + Ca (II) [Cytoplasm] = Na (I) [Cytoplasm] + Ca (II) [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]