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The map label for this gene is ylbK [H]

Identifier: 119945078

GI number: 119945078

Start: 1652413

End: 1654650

Strand: Direct

Name: ylbK [H]

Synonym: Ping_1334

Alternate gene names: 119945078

Gene position: 1652413-1654650 (Clockwise)

Preceding gene: 119945076

Following gene: 119945079

Centisome position: 36.24

GC content: 42.27

Gene sequence:

>2238_bases
GTGCGTTATTTATTGCTGTTATCACTCCTTCTGTCCTTAACGGTTTTTGCAGATTCCCAAGCTAGGCCTAAAATAGGGCT
TGTTTTAGGTGGAGGTGGTGCGAAAGGGGCTGCGCACATCGGTATTTTAAAAGTCTTAGAAAGCAATAATGTGCCGATTG
ATTTTATTGCAGGTACCAGTATCGGCGCTTATATCGGTGGACTGTATGCGCTAGGATATAATGCCGATGAGATTGAAAAT
ATTATGTTCAATGTCGACTGGGACAAAGGTTTTTCAGATTTTATACCGCGAGAAAATTTACAATATGCGGATAAACAGTT
GCGCGATGAATACAATATTGCCCTGAGACTCGGTTATAGCGATGCCACACTTAAAACAGCCAGCGGTCTTTTGCTCGGTC
AATCCGCATTTCAACTGCTTAAGCTTTCAACCGGGGTAGTCAGCGAATTTGAGAGTTTTGACGATTTACCTATCCCCTAT
CGCGCAGTGGCGGCTGATATTGTAACGGCTGAGACCGTGGTACTCAATCATGGCAGTCTTGTTCAAGCAATGAGAGCATC
ATCGACGGTGCCCGGTGTGGTTGAGCCGACTGTGATTGATGGACGGCTGCTTGTTGATGGGGCGATAGTTAATAATATGC
CGGTTGATGTCGTTAAGCTCATGGGGGCAGATATTATTATTGCCGTTGATATCGGCTCCCCTTTGTTAACCCAGAAAGAG
ATTAACCTTCCTATCGATGTACTGGATCAGTTATCTAATATATTAACCATCAATACCACAAAAAGACAAATAGACCTACT
CGGTGAAAAAGATCTGCTGATTCGACCTGATATCGGCGCATTAAGCACCAGCGATTTTTCTCAGATGCCTGCAGCAATGG
CCTTAGGTGAAAAATCTGCACTTGAAAATAGGGATAAAATACAATCCTTAAGTCTCTATGATAAGCAATATTTACAATAT
ACTCGGCACAAAAAAGCCAAACAAGCGCAATGGATAAAAGCTGCATCTCAGCCTATTGTCACTATTCAATATGAAAATGA
TTCTAATGTCGCCGTGGAGATTATTGAACGACAGTTGGGCATCAGAGTGGGGGATCTGGTCAGCAAAGAAAAATTAGACG
ATGCCATTTCACGCGTCTACGCATTAGACCTGTTTGACACGGTTAATGCGGAATTTATTGATACGAACACCGGACGTATG
TTAGTGATAAAAACCAGGGCCAAGTCATGGGGACCTAATTACTTACATTTTGGTTTTAGCTGGCAAGGGGATTTTTCCAG
TGATTCTCAAGTGTCATTGGATCTCGCTTATATCCTTACGGATATAACAGACAATGGTGGGCAGTGGATAAATGAGGTTT
CTTTAGGTTGGGAGTCGATGCTGGCGACTGAGTTTTATCAACCTTTAGACACAGAGCATGATTATTTTAGCCGTGCACGT
GTTGAATATAGGCAGGAAAAATATGCACAGGGCCAGTTTACACAGAATAACAGCAGACCTGCATTAACTCATCATTATGG
GCAAGTCAGTCTTGGTTTGGGAAATGCTTACACGGATAACGGCATCTCAGAAGTGGGTCTGTTAGCTGAAATTGGCCAAA
TGAATTTTGAAGATCAGTCCTACGATGCGCTTGACTACTATTCAATGGGTACTTATCTGTCATTTGGTTTTGATAATCTT
AATAGTATTAATTTCCCCACCCAAGGTAATAAATTATCACTCGATTTTTATTTGCGCAAGGATCAATATGCTCACCCGTT
TTTAGAAAATACAGAAAATTCCTCACTTGAAATTAATTTTGATTGGCGTGGTGCAGTGGGGCTGGGACAGCATACTTTCG
TGGGTGTCACCTCTCTTGCAACAGTATTAAGTGATGATGATTTTTCTATACGTGCCTCAGAGCTGGGTGGTTTTTTGAAC
CTTTCCGGCTACCATAAAGATGAGTTTATCGGTGCGCATAAAGTATTTGGTGCGGCGGTTTATCAATATGATTTAGGGCG
CTCAATCTTTGGCAATGCGGGGTTACCGTTATACCTGGGAGGGAGTTTGGAAGTGGGTAATGTATGGGGGATAAATGATA
GCGTTAAAATAGATGAGTTAATGACGTCTGGCAGTTTGTTTTTAGGAACAGATACGAATTTTGGACCTGCCGTGTTCGGA
GTGGGTTCTGGCGTTGCTCTGGATCGTAATAAGGGAAATGACATTAGGGCATTTTTCTCTTTAGGTAAAAACTGGTGA

Upstream 100 bases:

>100_bases
TTTTTTTAAAATGTGATCATTTAATTATTTTTTTGCTATCAGGCATTAGCACACTAACAATACCTAATTGGTTCATAATC
TAACACAAGGAAGCTTTATA

Downstream 100 bases:

>100_bases
GTGGCTCTTAAATCAACCTAGAGTCAAATAATAGTTATCTGGTTTTTTACTTCAATTTGTACCTACTCAATTATTGCCCG
TTTAATTTCACATTTATCCT

Product: patatin-like protein of phospholipase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 745; Mature: 745

Protein sequence:

>745_residues
MRYLLLLSLLLSLTVFADSQARPKIGLVLGGGGAKGAAHIGILKVLESNNVPIDFIAGTSIGAYIGGLYALGYNADEIEN
IMFNVDWDKGFSDFIPRENLQYADKQLRDEYNIALRLGYSDATLKTASGLLLGQSAFQLLKLSTGVVSEFESFDDLPIPY
RAVAADIVTAETVVLNHGSLVQAMRASSTVPGVVEPTVIDGRLLVDGAIVNNMPVDVVKLMGADIIIAVDIGSPLLTQKE
INLPIDVLDQLSNILTINTTKRQIDLLGEKDLLIRPDIGALSTSDFSQMPAAMALGEKSALENRDKIQSLSLYDKQYLQY
TRHKKAKQAQWIKAASQPIVTIQYENDSNVAVEIIERQLGIRVGDLVSKEKLDDAISRVYALDLFDTVNAEFIDTNTGRM
LVIKTRAKSWGPNYLHFGFSWQGDFSSDSQVSLDLAYILTDITDNGGQWINEVSLGWESMLATEFYQPLDTEHDYFSRAR
VEYRQEKYAQGQFTQNNSRPALTHHYGQVSLGLGNAYTDNGISEVGLLAEIGQMNFEDQSYDALDYYSMGTYLSFGFDNL
NSINFPTQGNKLSLDFYLRKDQYAHPFLENTENSSLEINFDWRGAVGLGQHTFVGVTSLATVLSDDDFSIRASELGGFLN
LSGYHKDEFIGAHKVFGAAVYQYDLGRSIFGNAGLPLYLGGSLEVGNVWGINDSVKIDELMTSGSLFLGTDTNFGPAVFG
VGSGVALDRNKGNDIRAFFSLGKNW

Sequences:

>Translated_745_residues
MRYLLLLSLLLSLTVFADSQARPKIGLVLGGGGAKGAAHIGILKVLESNNVPIDFIAGTSIGAYIGGLYALGYNADEIEN
IMFNVDWDKGFSDFIPRENLQYADKQLRDEYNIALRLGYSDATLKTASGLLLGQSAFQLLKLSTGVVSEFESFDDLPIPY
RAVAADIVTAETVVLNHGSLVQAMRASSTVPGVVEPTVIDGRLLVDGAIVNNMPVDVVKLMGADIIIAVDIGSPLLTQKE
INLPIDVLDQLSNILTINTTKRQIDLLGEKDLLIRPDIGALSTSDFSQMPAAMALGEKSALENRDKIQSLSLYDKQYLQY
TRHKKAKQAQWIKAASQPIVTIQYENDSNVAVEIIERQLGIRVGDLVSKEKLDDAISRVYALDLFDTVNAEFIDTNTGRM
LVIKTRAKSWGPNYLHFGFSWQGDFSSDSQVSLDLAYILTDITDNGGQWINEVSLGWESMLATEFYQPLDTEHDYFSRAR
VEYRQEKYAQGQFTQNNSRPALTHHYGQVSLGLGNAYTDNGISEVGLLAEIGQMNFEDQSYDALDYYSMGTYLSFGFDNL
NSINFPTQGNKLSLDFYLRKDQYAHPFLENTENSSLEINFDWRGAVGLGQHTFVGVTSLATVLSDDDFSIRASELGGFLN
LSGYHKDEFIGAHKVFGAAVYQYDLGRSIFGNAGLPLYLGGSLEVGNVWGINDSVKIDELMTSGSLFLGTDTNFGPAVFG
VGSGVALDRNKGNDIRAFFSLGKNW
>Mature_745_residues
MRYLLLLSLLLSLTVFADSQARPKIGLVLGGGGAKGAAHIGILKVLESNNVPIDFIAGTSIGAYIGGLYALGYNADEIEN
IMFNVDWDKGFSDFIPRENLQYADKQLRDEYNIALRLGYSDATLKTASGLLLGQSAFQLLKLSTGVVSEFESFDDLPIPY
RAVAADIVTAETVVLNHGSLVQAMRASSTVPGVVEPTVIDGRLLVDGAIVNNMPVDVVKLMGADIIIAVDIGSPLLTQKE
INLPIDVLDQLSNILTINTTKRQIDLLGEKDLLIRPDIGALSTSDFSQMPAAMALGEKSALENRDKIQSLSLYDKQYLQY
TRHKKAKQAQWIKAASQPIVTIQYENDSNVAVEIIERQLGIRVGDLVSKEKLDDAISRVYALDLFDTVNAEFIDTNTGRM
LVIKTRAKSWGPNYLHFGFSWQGDFSSDSQVSLDLAYILTDITDNGGQWINEVSLGWESMLATEFYQPLDTEHDYFSRAR
VEYRQEKYAQGQFTQNNSRPALTHHYGQVSLGLGNAYTDNGISEVGLLAEIGQMNFEDQSYDALDYYSMGTYLSFGFDNL
NSINFPTQGNKLSLDFYLRKDQYAHPFLENTENSSLEINFDWRGAVGLGQHTFVGVTSLATVLSDDDFSIRASELGGFLN
LSGYHKDEFIGAHKVFGAAVYQYDLGRSIFGNAGLPLYLGGSLEVGNVWGINDSVKIDELMTSGSLFLGTDTNFGPAVFG
VGSGVALDRNKGNDIRAFFSLGKNW

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI148727335, Length=292, Percent_Identity=29.7945205479452, Blast_Score=124, Evalue=3e-28,
Organism=Homo sapiens, GI148727290, Length=292, Percent_Identity=29.7945205479452, Blast_Score=124, Evalue=3e-28,
Organism=Homo sapiens, GI260656039, Length=211, Percent_Identity=35.5450236966825, Blast_Score=119, Evalue=1e-26,
Organism=Homo sapiens, GI260656041, Length=211, Percent_Identity=35.5450236966825, Blast_Score=119, Evalue=1e-26,
Organism=Homo sapiens, GI116256487, Length=211, Percent_Identity=35.5450236966825, Blast_Score=119, Evalue=1e-26,
Organism=Homo sapiens, GI260656043, Length=211, Percent_Identity=35.5450236966825, Blast_Score=119, Evalue=1e-26,
Organism=Homo sapiens, GI260656037, Length=211, Percent_Identity=35.5450236966825, Blast_Score=119, Evalue=1e-26,
Organism=Escherichia coli, GI226510936, Length=325, Percent_Identity=27.6923076923077, Blast_Score=106, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI71997299, Length=287, Percent_Identity=28.5714285714286, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI71997289, Length=287, Percent_Identity=28.5714285714286, Blast_Score=89, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6323581, Length=298, Percent_Identity=25.503355704698, Blast_Score=91, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 81830; Mature: 81830

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLLLLSLLLSLTVFADSQARPKIGLVLGGGGAKGAAHIGILKVLESNNVPIDFIAGTS
CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHEEEEEEECCCCCEEEEECCC
IGAYIGGLYALGYNADEIENIMFNVDWDKGFSDFIPRENLQYADKQLRDEYNIALRLGYS
HHHHHHHHHEECCCHHHHCEEEEEEECCCCHHHCCCCCCCHHHHHHHCCCEEEEEEECCC
DATLKTASGLLLGQSAFQLLKLSTGVVSEFESFDDLPIPYRAVAADIVTAETVVLNHGSL
CCCHHHHCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEEEECCCHH
VQAMRASSTVPGVVEPTVIDGRLLVDGAIVNNMPVDVVKLMGADIIIAVDIGSPLLTQKE
HHHHHHCCCCCCCCCCEEECCEEEECCEEECCCCHHHHHHCCCCEEEEEECCCCCCCCCC
INLPIDVLDQLSNILTINTTKRQIDLLGEKDLLIRPDIGALSTSDFSQMPAAMALGEKSA
CCCCHHHHHHHCCEEEEECCHHHHEECCCCCEEECCCCCCCCCCCHHHCCHHHHCCCHHH
LENRDKIQSLSLYDKQYLQYTRHKKAKQAQWIKAASQPIVTIQYENDSNVAVEIIERQLG
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHC
IRVGDLVSKEKLDDAISRVYALDLFDTVNAEFIDTNTGRMLVIKTRAKSWGPNYLHFGFS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCEEEEEEE
WQGDFSSDSQVSLDLAYILTDITDNGGQWINEVSLGWESMLATEFYQPLDTEHDYFSRAR
ECCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHH
VEYRQEKYAQGQFTQNNSRPALTHHYGQVSLGLGNAYTDNGISEVGLLAEIGQMNFEDQS
HHHHHHHHCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC
YDALDYYSMGTYLSFGFDNLNSINFPTQGNKLSLDFYLRKDQYAHPFLENTENSSLEINF
CCCHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEE
DWRGAVGLGQHTFVGVTSLATVLSDDDFSIRASELGGFLNLSGYHKDEFIGAHKVFGAAV
EECCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHCCCEEEECCCCCHHHCCHHHHHHHHH
YQYDLGRSIFGNAGLPLYLGGSLEVGNVWGINDSVKIDELMTSGSLFLGTDTNFGPAVFG
EEHHCCCHHCCCCCCCEEECCEEEECCEECCCCCCCHHHHHCCCCEEEECCCCCCCEEEE
VGSGVALDRNKGNDIRAFFSLGKNW
CCCCEEEECCCCCCCCEEECCCCCC
>Mature Secondary Structure
MRYLLLLSLLLSLTVFADSQARPKIGLVLGGGGAKGAAHIGILKVLESNNVPIDFIAGTS
CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHEEEEEEECCCCCEEEEECCC
IGAYIGGLYALGYNADEIENIMFNVDWDKGFSDFIPRENLQYADKQLRDEYNIALRLGYS
HHHHHHHHHEECCCHHHHCEEEEEEECCCCHHHCCCCCCCHHHHHHHCCCEEEEEEECCC
DATLKTASGLLLGQSAFQLLKLSTGVVSEFESFDDLPIPYRAVAADIVTAETVVLNHGSL
CCCHHHHCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEEEECCCHH
VQAMRASSTVPGVVEPTVIDGRLLVDGAIVNNMPVDVVKLMGADIIIAVDIGSPLLTQKE
HHHHHHCCCCCCCCCCEEECCEEEECCEEECCCCHHHHHHCCCCEEEEEECCCCCCCCCC
INLPIDVLDQLSNILTINTTKRQIDLLGEKDLLIRPDIGALSTSDFSQMPAAMALGEKSA
CCCCHHHHHHHCCEEEEECCHHHHEECCCCCEEECCCCCCCCCCCHHHCCHHHHCCCHHH
LENRDKIQSLSLYDKQYLQYTRHKKAKQAQWIKAASQPIVTIQYENDSNVAVEIIERQLG
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHC
IRVGDLVSKEKLDDAISRVYALDLFDTVNAEFIDTNTGRMLVIKTRAKSWGPNYLHFGFS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCEEEEEEE
WQGDFSSDSQVSLDLAYILTDITDNGGQWINEVSLGWESMLATEFYQPLDTEHDYFSRAR
ECCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHH
VEYRQEKYAQGQFTQNNSRPALTHHYGQVSLGLGNAYTDNGISEVGLLAEIGQMNFEDQS
HHHHHHHHCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC
YDALDYYSMGTYLSFGFDNLNSINFPTQGNKLSLDFYLRKDQYAHPFLENTENSSLEINF
CCCHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEE
DWRGAVGLGQHTFVGVTSLATVLSDDDFSIRASELGGFLNLSGYHKDEFIGAHKVFGAAV
EECCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHCCCEEEECCCCCHHHCCHHHHHHHHH
YQYDLGRSIFGNAGLPLYLGGSLEVGNVWGINDSVKIDELMTSGSLFLGTDTNFGPAVFG
EEHHCCCHHCCCCCCCEEECCEEEECCEECCCCCCCHHHHHCCCCEEEECCCCCCCEEEE
VGSGVALDRNKGNDIRAFFSLGKNW
CCCCEEEECCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]