Click here to switch to the map view.

The map label for this gene is fdx [H]

Identifier: 119945073

GI number: 119945073

Start: 1647990

End: 1648328

Strand: Direct

Name: fdx [H]

Synonym: Ping_1329

Alternate gene names: 119945073

Gene position: 1647990-1648328 (Clockwise)

Preceding gene: 119945072

Following gene: 119945074

Centisome position: 36.14

GC content: 38.64

Gene sequence:

>339_bases
ATGCCAAAAGTAATATTTTTACCCCATGAAGAGTTATGTCCTGATGGTTTAGTGATTGAAGTTAAAGAAGGCGAGACTAT
TTTAGATATTGCCTTAAGAAATAGCATTCATATTGAACATGCCTGTGAAAAATCCTGTGCTTGCACTACCTGTCATGTTG
TCGTTCGAGAAGGGTTTGATTCGCTTGAAGAAAGTGATGAACTGGAAGATGATATGTTAGATAAAGCATGGGGACTTGAG
CCTGACTCCCGCCTAAGCTGCCAGGCCTGTGTAACAGATAAAGATTTAGTGGTAGAAATTCCTAAATATACCGTTAATAT
GGTCTCAGAAAGTCATTAG

Upstream 100 bases:

>100_bases
TTGCGTATGGATTCATCAATCAAAAGCGCATTAACCGGTCGCGCAGTAGATCAAATCTAGCACGCATTAATTAATTTAAA
AGATAGAAGGTACCATTAAT

Downstream 100 bases:

>100_bases
TAATATCAGACTAGGCCGTATTTAACTCTAATGAGGAGATAAACATGACGTTAAAATGGATAGATTCTTTAGAAATAGCA
TTAGCTTTGATTGATAAATA

Product: ferredoxin, 2Fe-2S type, ISC system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MPKVIFLPHEELCPDGLVIEVKEGETILDIALRNSIHIEHACEKSCACTTCHVVVREGFDSLEESDELEDDMLDKAWGLE
PDSRLSCQACVTDKDLVVEIPKYTVNMVSESH

Sequences:

>Translated_112_residues
MPKVIFLPHEELCPDGLVIEVKEGETILDIALRNSIHIEHACEKSCACTTCHVVVREGFDSLEESDELEDDMLDKAWGLE
PDSRLSCQACVTDKDLVVEIPKYTVNMVSESH
>Mature_111_residues
PKVIFLPHEELCPDGLVIEVKEGETILDIALRNSIHIEHACEKSCACTTCHVVVREGFDSLEESDELEDDMLDKAWGLEP
DSRLSCQACVTDKDLVVEIPKYTVNMVSESH

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=97, Percent_Identity=41.2371134020619, Blast_Score=67, Evalue=3e-12,
Organism=Homo sapiens, GI4758352, Length=90, Percent_Identity=36.6666666666667, Blast_Score=62, Evalue=8e-11,
Organism=Escherichia coli, GI1788874, Length=110, Percent_Identity=76.3636363636364, Blast_Score=179, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI17544202, Length=97, Percent_Identity=42.2680412371134, Blast_Score=69, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6325004, Length=92, Percent_Identity=48.9130434782609, Blast_Score=76, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24661503, Length=97, Percent_Identity=41.2371134020619, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12543; Mature: 12412

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVIFLPHEELCPDGLVIEVKEGETILDIALRNSIHIEHACEKSCACTTCHVVVREGFD
CCEEEECCCHHHCCCCEEEEECCCCEEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHCHH
SLEESDELEDDMLDKAWGLEPDSRLSCQACVTDKDLVVEIPKYTVNMVSESH
HHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCCCEEEECCCCC
>Mature Secondary Structure 
PKVIFLPHEELCPDGLVIEVKEGETILDIALRNSIHIEHACEKSCACTTCHVVVREGFD
CEEEECCCHHHCCCCEEEEECCCCEEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHCHH
SLEESDELEDDMLDKAWGLEPDSRLSCQACVTDKDLVVEIPKYTVNMVSESH
HHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8809750; 10984043 [H]