| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is glgC [H]
Identifier: 119945042
GI number: 119945042
Start: 1601190
End: 1602470
Strand: Reverse
Name: glgC [H]
Synonym: Ping_1296
Alternate gene names: 119945042
Gene position: 1602470-1601190 (Counterclockwise)
Preceding gene: 119945051
Following gene: 119945040
Centisome position: 35.14
GC content: 40.59
Gene sequence:
>1281_bases ATGCCACACAGAAGTGATAGGTATATCAGTAACCTCACCAAAGATACCTATGCATTGGTTTTAGCAGGCGGTCGTGGTAG TCGATTATTCGAACTGACAGATTCGCGCGCTAAACCTGCCGTCTATTTTGGTGGTAAATTCCGGATCATTGATTTTTCAT TATCAAACTGTATCAATTCAGGTATTAACCGCATAGGAGTCGCCACTCAATACAAATCACACTCTTTAATCCGCCACATT AACCGCGGTTGGGGAAATTTCAAGGCTAATTTATCGGAATTTGTTGAAGTTTTGCCCGCATCACAGGGTAATAACAATGA TTGGTATCTGGGTACAGCCGATGCTGTGTATCAAAATATAGATATTATTTGTGCTGAGCGTCCTAAATATGTGTTAATTT TATCCGGCGATCATGTATATCGTATGGATTATGGTCCGCTAATAGCTGAGCATGTGGCCAATAATGCCGATATGACTGTC TGTTGTCTTAAAGCGACAACCGAAGAGGCTGCGGACAGCTTTGGCGTCATGACAGTCAACGCGGATAATAAAGTGATTGC ATTTGATGAAAAGCCGGCCCAACCTAATGAAATACCCGATAATCCGGGTCAGTGCCTGGCTTCAATGGGTAATTATCTTT TTAATACTGATTTTTTGTTCGAACATCTGTTAAACGATTATTCAAGCGAAAATTCCAGTCGTGATTTTGGGCATGATATT ATCCCTTCAATTATTAAAGATAATAATGTTTTTTCCTATGCCTTTAAAGATCCGGATAGTGAGAATCAGCCCTATTGGCG TGATGTGGGTACATTAGATGCATTTTGGGAAGCTAATATGGAACTTGTTACGCCTCAACCACAACTCGATTTATATGATA AAGCTTGGCCTATTTGGACATATCAGGAGCAGCTCCCACCGAGCAAATTTATTTTTGATGATGATTTGCGCCGTGGTCTA GCGGTTGATTCAACGGTTTCCGCCGGTTGTATCATCTCCGGTTCAACTGTTCGTAAATCATTATTATATTCAAGTGTTCA TACACACTCATACAGCCTTATTGAAGAATCGGTAGTACTCCATGGTAGCCATGTCGGTGAGCGCTGTAAATTAAAACGGG TTATCGTCGATAGTAAATGTCATATTCCTGCAGGTTTAACCATTGGTTATGACCGAGAGCAGGATATAGAGAACGGTTTT CGGGTGACCGAAAAAGGGATCACCCTTGTTACAAGTCAGATGCTGAAAGCTTTAGCTAAAAAACAAATGATTATTGATTA A
Upstream 100 bases:
>100_bases GCACAGTTAAAATTTATTATTTTTATCTGTTTAATGTTCAATCTTATTGATAAAAACAATAAAACTTCTTTCTTACATAC TCAACTTTTTTGGAGATTTT
Downstream 100 bases:
>100_bases GCCCATCAAAATAGAGTAAGGGTAGCCGCAGTTACCCTTCTTTTAGCGATAATCTATCGCAAAAAACACTTAAAAACAAA TCTATAATTAGTTCCATCTA
Product: glucose-1-phosphate adenylyltransferase
Products: NA
Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase [H]
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MPHRSDRYISNLTKDTYALVLAGGRGSRLFELTDSRAKPAVYFGGKFRIIDFSLSNCINSGINRIGVATQYKSHSLIRHI NRGWGNFKANLSEFVEVLPASQGNNNDWYLGTADAVYQNIDIICAERPKYVLILSGDHVYRMDYGPLIAEHVANNADMTV CCLKATTEEAADSFGVMTVNADNKVIAFDEKPAQPNEIPDNPGQCLASMGNYLFNTDFLFEHLLNDYSSENSSRDFGHDI IPSIIKDNNVFSYAFKDPDSENQPYWRDVGTLDAFWEANMELVTPQPQLDLYDKAWPIWTYQEQLPPSKFIFDDDLRRGL AVDSTVSAGCIISGSTVRKSLLYSSVHTHSYSLIEESVVLHGSHVGERCKLKRVIVDSKCHIPAGLTIGYDREQDIENGF RVTEKGITLVTSQMLKALAKKQMIID
Sequences:
>Translated_426_residues MPHRSDRYISNLTKDTYALVLAGGRGSRLFELTDSRAKPAVYFGGKFRIIDFSLSNCINSGINRIGVATQYKSHSLIRHI NRGWGNFKANLSEFVEVLPASQGNNNDWYLGTADAVYQNIDIICAERPKYVLILSGDHVYRMDYGPLIAEHVANNADMTV CCLKATTEEAADSFGVMTVNADNKVIAFDEKPAQPNEIPDNPGQCLASMGNYLFNTDFLFEHLLNDYSSENSSRDFGHDI IPSIIKDNNVFSYAFKDPDSENQPYWRDVGTLDAFWEANMELVTPQPQLDLYDKAWPIWTYQEQLPPSKFIFDDDLRRGL AVDSTVSAGCIISGSTVRKSLLYSSVHTHSYSLIEESVVLHGSHVGERCKLKRVIVDSKCHIPAGLTIGYDREQDIENGF RVTEKGITLVTSQMLKALAKKQMIID >Mature_425_residues PHRSDRYISNLTKDTYALVLAGGRGSRLFELTDSRAKPAVYFGGKFRIIDFSLSNCINSGINRIGVATQYKSHSLIRHIN RGWGNFKANLSEFVEVLPASQGNNNDWYLGTADAVYQNIDIICAERPKYVLILSGDHVYRMDYGPLIAEHVANNADMTVC CLKATTEEAADSFGVMTVNADNKVIAFDEKPAQPNEIPDNPGQCLASMGNYLFNTDFLFEHLLNDYSSENSSRDFGHDII PSIIKDNNVFSYAFKDPDSENQPYWRDVGTLDAFWEANMELVTPQPQLDLYDKAWPIWTYQEQLPPSKFIFDDDLRRGLA VDSTVSAGCIISGSTVRKSLLYSSVHTHSYSLIEESVVLHGSHVGERCKLKRVIVDSKCHIPAGLTIGYDREQDIENGFR VTEKGITLVTSQMLKALAKKQMIID
Specific function: Glycogen biosynthesis; first step. [C]
COG id: COG0448
COG function: function code G; ADP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789837, Length=419, Percent_Identity=50.3579952267303, Blast_Score=438, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005836 - InterPro: IPR011831 - InterPro: IPR023049 - InterPro: IPR005835 - InterPro: IPR011004 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.27 [H]
Molecular weight: Translated: 47764; Mature: 47633
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1 ; PS00809 ADP_GLC_PYROPHOSPH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHRSDRYISNLTKDTYALVLAGGRGSRLFELTDSRAKPAVYFGGKFRIIDFSLSNCINS CCCCCCHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCCEEEECCEEEEEEEEHHHHHHH GINRIGVATQYKSHSLIRHINRGWGNFKANLSEFVEVLPASQGNNNDWYLGTADAVYQNI CHHHCCCEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECHHHHHCCC DIICAERPKYVLILSGDHVYRMDYGPLIAEHVANNADMTVCCLKATTEEAADSFGVMTVN EEEEECCCCEEEEECCCEEEEECCCHHHHHHHCCCCCEEEEEEECCHHHHHHCCCEEEEC ADNKVIAFDEKPAQPNEIPDNPGQCLASMGNYLFNTDFLFEHLLNDYSSENSSRDFGHDI CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHH IPSIIKDNNVFSYAFKDPDSENQPYWRDVGTLDAFWEANMELVTPQPQLDLYDKAWPIWT HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCEEECCCCCCCCCCCCCCEEE YQEQLPPSKFIFDDDLRRGLAVDSTVSAGCIISGSTVRKSLLYSSVHTHSYSLIEESVVL EHHHCCCCCCEECHHHHCCCEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHEE HGSHVGERCKLKRVIVDSKCHIPAGLTIGYDREQDIENGFRVTEKGITLVTSQMLKALAK ECCCCCCHHEEEEEEECCCCCCCCCCEECCCCCHHHHCCCEEECCCHHHHHHHHHHHHHH KQMIID HHHCCC >Mature Secondary Structure PHRSDRYISNLTKDTYALVLAGGRGSRLFELTDSRAKPAVYFGGKFRIIDFSLSNCINS CCCCCHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCCEEEECCEEEEEEEEHHHHHHH GINRIGVATQYKSHSLIRHINRGWGNFKANLSEFVEVLPASQGNNNDWYLGTADAVYQNI CHHHCCCEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECHHHHHCCC DIICAERPKYVLILSGDHVYRMDYGPLIAEHVANNADMTVCCLKATTEEAADSFGVMTVN EEEEECCCCEEEEECCCEEEEECCCHHHHHHHCCCCCEEEEEEECCHHHHHHCCCEEEEC ADNKVIAFDEKPAQPNEIPDNPGQCLASMGNYLFNTDFLFEHLLNDYSSENSSRDFGHDI CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHH IPSIIKDNNVFSYAFKDPDSENQPYWRDVGTLDAFWEANMELVTPQPQLDLYDKAWPIWT HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCEEECCCCCCCCCCCCCCEEE YQEQLPPSKFIFDDDLRRGLAVDSTVSAGCIISGSTVRKSLLYSSVHTHSYSLIEESVVL EHHHCCCCCCEECHHHHCCCEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHEE HGSHVGERCKLKRVIVDSKCHIPAGLTIGYDREQDIENGFRVTEKGITLVTSQMLKALAK ECCCCCCHHEEEEEEECCCCCCCCCCEECCCCCHHHHCCCEEECCCHHHHHHHHHHHHHH KQMIID HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA