| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yecA [C]
Identifier: 119945038
GI number: 119945038
Start: 1597549
End: 1597884
Strand: Direct
Name: yecA [C]
Synonym: Ping_1292
Alternate gene names: 119945038
Gene position: 1597549-1597884 (Clockwise)
Preceding gene: 119945037
Following gene: 119945039
Centisome position: 35.04
GC content: 38.39
Gene sequence:
>336_bases ATGTCAGATAAATTTTTCTTTAAAGGTAAAAAAGAGAAAAAACCCAAGCACTCCAGTTATGGTTTCAATACCAAGCGCGC CGCGAAAGCCGGCACTGAAGAATCTCCCTTCCTATTATTGGTCAATACGCCCGTCAGAAAAGCTGAAATTGAACAAATTT TGCAGGAAAATAATTTGATTGCAAAGATTGAAGTGAAGGCTGATGTTTCTGAAAATATTGCCGAACTTGAAGGGTTCTTA AATAAACCTAAAACCATTACCGTTGTAGCTCAACCGCAGCGTAATGAGCCCTGTCCTTGTGGCAGCGGTAAAAAATATAA AAAATGTTGTGCTTAA
Upstream 100 bases:
>100_bases ATGTTCTGTTATTGCCATTTAATTAAGCAATTTGCTAATACCTCTTTAGCCGTTAATCGTGTAAACTTCGCGCTCTTAAT TTTTGAAATAAGGCTTTAAA
Downstream 100 bases:
>100_bases ATAATAATAATTCAACTGTTTAATAATATGTTAGAGGGCTAATATGACAAATGATCAACAGATTCAACTCGAGGCTGCCG CTTTTCGCCGTTTATTAAAA
Product: SecC motif-containing protein
Products: NA
Alternate protein names: SEC-C Motif Domain-Containing Protein; ATPase; SEC-C Motif Domain Protein; Preprotein Translocase Subunit-Like Protein
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSDKFFFKGKKEKKPKHSSYGFNTKRAAKAGTEESPFLLLVNTPVRKAEIEQILQENNLIAKIEVKADVSENIAELEGFL NKPKTITVVAQPQRNEPCPCGSGKKYKKCCA
Sequences:
>Translated_111_residues MSDKFFFKGKKEKKPKHSSYGFNTKRAAKAGTEESPFLLLVNTPVRKAEIEQILQENNLIAKIEVKADVSENIAELEGFL NKPKTITVVAQPQRNEPCPCGSGKKYKKCCA >Mature_110_residues SDKFFFKGKKEKKPKHSSYGFNTKRAAKAGTEESPFLLLVNTPVRKAEIEQILQENNLIAKIEVKADVSENIAELEGFLN KPKTITVVAQPQRNEPCPCGSGKKYKKCCA
Specific function: Unknown
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12401; Mature: 12270
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKFFFKGKKEKKPKHSSYGFNTKRAAKAGTEESPFLLLVNTPVRKAEIEQILQENNLI CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCEE AKIEVKADVSENIAELEGFLNKPKTITVVAQPQRNEPCPCGSGKKYKKCCA EEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure SDKFFFKGKKEKKPKHSSYGFNTKRAAKAGTEESPFLLLVNTPVRKAEIEQILQENNLI CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCEE AKIEVKADVSENIAELEGFLNKPKTITVVAQPQRNEPCPCGSGKKYKKCCA EEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA