| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945035
Identifier: 119945035
GI number: 119945035
Start: 1594984
End: 1595940
Strand: Direct
Name: 119945035
Synonym: Ping_1289
Alternate gene names: NA
Gene position: 1594984-1595940 (Clockwise)
Preceding gene: 119945030
Following gene: 119945036
Centisome position: 34.98
GC content: 39.71
Gene sequence:
>957_bases ATGAGTTTGACGTCTTTAAGAAATAAATCCAGCGATCCCAAACAAGGGGTTTATTTTATTGGTACAACACCCCCCAAGCA GGATACCGCGATAGAATTAGTATCGGGTATTGCAGATAAATTATTAGACCGACTTGATTCGATTGATTATGATGGTTTAA TTGTTTATGACATTCAAGACGAAACCTCACGTATTGATAAACCACGTCCATTCCCTTTTAAATATACCCATGATTCACGC TTATATTCAAAAATTTTACATGATAAGTCGGCGAAGCCTGTGATCACCTATAAAAGCGTTTCTCAACGTGACGGGGTTGA TTTTTCGCGCTGGTTGTCCGATGCATGGCACCAATTTTCAGTGCGTGATATTGTTTTAGTCGGGAGTCCCTCGGCCAATA GCGATATTAAATTATCGTTAGCCGATGCCTATCAGACCGTAAAAGATCATAATTTAGATTTTCATTTAGGTGGCGTGGCT ATTGCTGAGCGTCACAGCAATAAAGGTGATGAGCATCTGCGTATGTTGGCTAAAAATGAGCAGGGTTGTGAATTTTTCAT TTCACAAGCTGTTTATAATGCCCAGGCAACCATTGATATGCTAACCCGTTATGCGCTGGAGTGTAAAAAACAGGGGAAAA AACCAAGACGTGTCGTGTTAACGTTTTCGCCCTGCGGTAGTGCTAAAACCCTTGCGTTCATTGAGTGGTTGGGTATTTCC GTGCCCGAGGCGACTAGCCTGCGAATTCTTGAATCTGATAATCCATTAAAAGAATCGTTATTAATTAGCCGAAATAATTT TGAACAGATTCTGCAGGCATGCCTCCCTTTGGATATTCCGTTAGGTTTAAATATAGAAAGCTTGACCAATCGCAAAGAAG AAATTGATGCAGCCATATTATTATTCAAATTGTTAAAAGCAACATTAGATCTTAAGTTAGCAGAATCACAACTGTAA
Upstream 100 bases:
>100_bases TGAAAATTACCTCTATCATTGTATTTCTTAGTTGTTTGGTTATGGGCAATATGCGACAATTTAACATAATTATGCTATTT CGAATGCTTAGGAAAAACTT
Downstream 100 bases:
>100_bases GTTTGACTGGTATACCCAAACTACTTGAATATGCAGATGCCTGCCTCTTCAAATAATTCGGGTATAGGATAATAGGATAG ATAAATGTCTCTAAGCAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSLTSLRNKSSDPKQGVYFIGTTPPKQDTAIELVSGIADKLLDRLDSIDYDGLIVYDIQDETSRIDKPRPFPFKYTHDSR LYSKILHDKSAKPVITYKSVSQRDGVDFSRWLSDAWHQFSVRDIVLVGSPSANSDIKLSLADAYQTVKDHNLDFHLGGVA IAERHSNKGDEHLRMLAKNEQGCEFFISQAVYNAQATIDMLTRYALECKKQGKKPRRVVLTFSPCGSAKTLAFIEWLGIS VPEATSLRILESDNPLKESLLISRNNFEQILQACLPLDIPLGLNIESLTNRKEEIDAAILLFKLLKATLDLKLAESQL
Sequences:
>Translated_318_residues MSLTSLRNKSSDPKQGVYFIGTTPPKQDTAIELVSGIADKLLDRLDSIDYDGLIVYDIQDETSRIDKPRPFPFKYTHDSR LYSKILHDKSAKPVITYKSVSQRDGVDFSRWLSDAWHQFSVRDIVLVGSPSANSDIKLSLADAYQTVKDHNLDFHLGGVA IAERHSNKGDEHLRMLAKNEQGCEFFISQAVYNAQATIDMLTRYALECKKQGKKPRRVVLTFSPCGSAKTLAFIEWLGIS VPEATSLRILESDNPLKESLLISRNNFEQILQACLPLDIPLGLNIESLTNRKEEIDAAILLFKLLKATLDLKLAESQL >Mature_317_residues SLTSLRNKSSDPKQGVYFIGTTPPKQDTAIELVSGIADKLLDRLDSIDYDGLIVYDIQDETSRIDKPRPFPFKYTHDSRL YSKILHDKSAKPVITYKSVSQRDGVDFSRWLSDAWHQFSVRDIVLVGSPSANSDIKLSLADAYQTVKDHNLDFHLGGVAI AERHSNKGDEHLRMLAKNEQGCEFFISQAVYNAQATIDMLTRYALECKKQGKKPRRVVLTFSPCGSAKTLAFIEWLGISV PEATSLRILESDNPLKESLLISRNNFEQILQACLPLDIPLGLNIESLTNRKEEIDAAILLFKLLKATLDLKLAESQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35712; Mature: 35581
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTSLRNKSSDPKQGVYFIGTTPPKQDTAIELVSGIADKLLDRLDSIDYDGLIVYDIQD CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC ETSRIDKPRPFPFKYTHDSRLYSKILHDKSAKPVITYKSVSQRDGVDFSRWLSDAWHQFS HHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCC VRDIVLVGSPSANSDIKLSLADAYQTVKDHNLDFHLGGVAIAERHSNKGDEHLRMLAKNE EEEEEEEECCCCCCCEEEEHHHHHHHHHHCCCEEEECCEEEECCCCCCCHHHHHHHHCCC QGCEFFISQAVYNAQATIDMLTRYALECKKQGKKPRRVVLTFSPCGSAKTLAFIEWLGIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCC VPEATSLRILESDNPLKESLLISRNNFEQILQACLPLDIPLGLNIESLTNRKEEIDAAIL CCCCCEEEEEECCCCHHHHHEECCCCHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHH LFKLLKATLDLKLAESQL HHHHHHHHHCHHHHCCCC >Mature Secondary Structure SLTSLRNKSSDPKQGVYFIGTTPPKQDTAIELVSGIADKLLDRLDSIDYDGLIVYDIQD CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC ETSRIDKPRPFPFKYTHDSRLYSKILHDKSAKPVITYKSVSQRDGVDFSRWLSDAWHQFS HHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCC VRDIVLVGSPSANSDIKLSLADAYQTVKDHNLDFHLGGVAIAERHSNKGDEHLRMLAKNE EEEEEEEECCCCCCCEEEEHHHHHHHHHHCCCEEEECCEEEECCCCCCCHHHHHHHHCCC QGCEFFISQAVYNAQATIDMLTRYALECKKQGKKPRRVVLTFSPCGSAKTLAFIEWLGIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCC VPEATSLRILESDNPLKESLLISRNNFEQILQACLPLDIPLGLNIESLTNRKEEIDAAIL CCCCCEEEEEECCCCHHHHHEECCCCHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHH LFKLLKATLDLKLAESQL HHHHHHHHHCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA