Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119945035

Identifier: 119945035

GI number: 119945035

Start: 1594984

End: 1595940

Strand: Direct

Name: 119945035

Synonym: Ping_1289

Alternate gene names: NA

Gene position: 1594984-1595940 (Clockwise)

Preceding gene: 119945030

Following gene: 119945036

Centisome position: 34.98

GC content: 39.71

Gene sequence:

>957_bases
ATGAGTTTGACGTCTTTAAGAAATAAATCCAGCGATCCCAAACAAGGGGTTTATTTTATTGGTACAACACCCCCCAAGCA
GGATACCGCGATAGAATTAGTATCGGGTATTGCAGATAAATTATTAGACCGACTTGATTCGATTGATTATGATGGTTTAA
TTGTTTATGACATTCAAGACGAAACCTCACGTATTGATAAACCACGTCCATTCCCTTTTAAATATACCCATGATTCACGC
TTATATTCAAAAATTTTACATGATAAGTCGGCGAAGCCTGTGATCACCTATAAAAGCGTTTCTCAACGTGACGGGGTTGA
TTTTTCGCGCTGGTTGTCCGATGCATGGCACCAATTTTCAGTGCGTGATATTGTTTTAGTCGGGAGTCCCTCGGCCAATA
GCGATATTAAATTATCGTTAGCCGATGCCTATCAGACCGTAAAAGATCATAATTTAGATTTTCATTTAGGTGGCGTGGCT
ATTGCTGAGCGTCACAGCAATAAAGGTGATGAGCATCTGCGTATGTTGGCTAAAAATGAGCAGGGTTGTGAATTTTTCAT
TTCACAAGCTGTTTATAATGCCCAGGCAACCATTGATATGCTAACCCGTTATGCGCTGGAGTGTAAAAAACAGGGGAAAA
AACCAAGACGTGTCGTGTTAACGTTTTCGCCCTGCGGTAGTGCTAAAACCCTTGCGTTCATTGAGTGGTTGGGTATTTCC
GTGCCCGAGGCGACTAGCCTGCGAATTCTTGAATCTGATAATCCATTAAAAGAATCGTTATTAATTAGCCGAAATAATTT
TGAACAGATTCTGCAGGCATGCCTCCCTTTGGATATTCCGTTAGGTTTAAATATAGAAAGCTTGACCAATCGCAAAGAAG
AAATTGATGCAGCCATATTATTATTCAAATTGTTAAAAGCAACATTAGATCTTAAGTTAGCAGAATCACAACTGTAA

Upstream 100 bases:

>100_bases
TGAAAATTACCTCTATCATTGTATTTCTTAGTTGTTTGGTTATGGGCAATATGCGACAATTTAACATAATTATGCTATTT
CGAATGCTTAGGAAAAACTT

Downstream 100 bases:

>100_bases
GTTTGACTGGTATACCCAAACTACTTGAATATGCAGATGCCTGCCTCTTCAAATAATTCGGGTATAGGATAATAGGATAG
ATAAATGTCTCTAAGCAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSLTSLRNKSSDPKQGVYFIGTTPPKQDTAIELVSGIADKLLDRLDSIDYDGLIVYDIQDETSRIDKPRPFPFKYTHDSR
LYSKILHDKSAKPVITYKSVSQRDGVDFSRWLSDAWHQFSVRDIVLVGSPSANSDIKLSLADAYQTVKDHNLDFHLGGVA
IAERHSNKGDEHLRMLAKNEQGCEFFISQAVYNAQATIDMLTRYALECKKQGKKPRRVVLTFSPCGSAKTLAFIEWLGIS
VPEATSLRILESDNPLKESLLISRNNFEQILQACLPLDIPLGLNIESLTNRKEEIDAAILLFKLLKATLDLKLAESQL

Sequences:

>Translated_318_residues
MSLTSLRNKSSDPKQGVYFIGTTPPKQDTAIELVSGIADKLLDRLDSIDYDGLIVYDIQDETSRIDKPRPFPFKYTHDSR
LYSKILHDKSAKPVITYKSVSQRDGVDFSRWLSDAWHQFSVRDIVLVGSPSANSDIKLSLADAYQTVKDHNLDFHLGGVA
IAERHSNKGDEHLRMLAKNEQGCEFFISQAVYNAQATIDMLTRYALECKKQGKKPRRVVLTFSPCGSAKTLAFIEWLGIS
VPEATSLRILESDNPLKESLLISRNNFEQILQACLPLDIPLGLNIESLTNRKEEIDAAILLFKLLKATLDLKLAESQL
>Mature_317_residues
SLTSLRNKSSDPKQGVYFIGTTPPKQDTAIELVSGIADKLLDRLDSIDYDGLIVYDIQDETSRIDKPRPFPFKYTHDSRL
YSKILHDKSAKPVITYKSVSQRDGVDFSRWLSDAWHQFSVRDIVLVGSPSANSDIKLSLADAYQTVKDHNLDFHLGGVAI
AERHSNKGDEHLRMLAKNEQGCEFFISQAVYNAQATIDMLTRYALECKKQGKKPRRVVLTFSPCGSAKTLAFIEWLGISV
PEATSLRILESDNPLKESLLISRNNFEQILQACLPLDIPLGLNIESLTNRKEEIDAAILLFKLLKATLDLKLAESQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35712; Mature: 35581

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTSLRNKSSDPKQGVYFIGTTPPKQDTAIELVSGIADKLLDRLDSIDYDGLIVYDIQD
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
ETSRIDKPRPFPFKYTHDSRLYSKILHDKSAKPVITYKSVSQRDGVDFSRWLSDAWHQFS
HHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCC
VRDIVLVGSPSANSDIKLSLADAYQTVKDHNLDFHLGGVAIAERHSNKGDEHLRMLAKNE
EEEEEEEECCCCCCCEEEEHHHHHHHHHHCCCEEEECCEEEECCCCCCCHHHHHHHHCCC
QGCEFFISQAVYNAQATIDMLTRYALECKKQGKKPRRVVLTFSPCGSAKTLAFIEWLGIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCC
VPEATSLRILESDNPLKESLLISRNNFEQILQACLPLDIPLGLNIESLTNRKEEIDAAIL
CCCCCEEEEEECCCCHHHHHEECCCCHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHH
LFKLLKATLDLKLAESQL
HHHHHHHHHCHHHHCCCC
>Mature Secondary Structure 
SLTSLRNKSSDPKQGVYFIGTTPPKQDTAIELVSGIADKLLDRLDSIDYDGLIVYDIQD
CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
ETSRIDKPRPFPFKYTHDSRLYSKILHDKSAKPVITYKSVSQRDGVDFSRWLSDAWHQFS
HHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCC
VRDIVLVGSPSANSDIKLSLADAYQTVKDHNLDFHLGGVAIAERHSNKGDEHLRMLAKNE
EEEEEEEECCCCCCCEEEEHHHHHHHHHHCCCEEEECCEEEECCCCCCCHHHHHHHHCCC
QGCEFFISQAVYNAQATIDMLTRYALECKKQGKKPRRVVLTFSPCGSAKTLAFIEWLGIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCC
VPEATSLRILESDNPLKESLLISRNNFEQILQACLPLDIPLGLNIESLTNRKEEIDAAIL
CCCCCEEEEEECCCCHHHHHEECCCCHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHH
LFKLLKATLDLKLAESQL
HHHHHHHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA