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The map label for this gene is lptE [H]

Identifier: 119944943

GI number: 119944943

Start: 1480770

End: 1481285

Strand: Reverse

Name: lptE [H]

Synonym: Ping_1190

Alternate gene names: 119944943

Gene position: 1481285-1480770 (Counterclockwise)

Preceding gene: 119944944

Following gene: 119944942

Centisome position: 32.49

GC content: 36.24

Gene sequence:

>516_bases
ATGCAGTCCACAGTACGCACATTTTTTTACACTAAAATAAGCTTAATCTTATTATCTGCTTTATTTATTAGCGGTTGTGG
TTTTCATTTAAAGAACAATAATGGTCTTATTGAAAAATACCCCAAAATTTACTTACAAAGTAATGATACAAATGGTCAAC
TAGCACGTTTTATTAAAATCCGTTTACGGGGTGCCGGCATTCAAATAATGAATCAGCCGGAAGCCAATGTTGCCATATTA
AAAGTCTCCCCAGATCGCCAATCATCACGCATCATTTCTCTCTATGTTAACGCGCAGAATGCAGAAAAAGAGATAAGTTA
TAATGTTAACTATTCAATTCAATCTCCCGGTTACCAAACCCAAGACTTTTCGGTAAATCTATATCGTGACTTTACTGAGA
ATGCTTCACAAGCGCTCGCAAAATCACGCGAAGCGGAAATATTAACCAAAGAATTGCGCGGTATTGCTGCTGACAGTATT
ATTGCCACTATGCTCAGCCTAGAAAATAAAAAATAA

Upstream 100 bases:

>100_bases
TTCTATATGTTCACCTAACTAACAGTTACTTAGCAATATATTGTCGGTGTGAGCAAGCTATTTGTTTCGCCGCCTATTTT
CACTTCTGAAAAGGTTTCTT

Downstream 100 bases:

>100_bases
GCGATAAAAAATGCGTATTTACCCTGAACAATTGAACCAACACCTTACGCAAAAAATACCCAGCTGCTGTTTGATTTTCG
GTGATGAGGCGCTACTTTGT

Product: rare lipoprotein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MQSTVRTFFYTKISLILLSALFISGCGFHLKNNNGLIEKYPKIYLQSNDTNGQLARFIKIRLRGAGIQIMNQPEANVAIL
KVSPDRQSSRIISLYVNAQNAEKEISYNVNYSIQSPGYQTQDFSVNLYRDFTENASQALAKSREAEILTKELRGIAADSI
IATMLSLENKK

Sequences:

>Translated_171_residues
MQSTVRTFFYTKISLILLSALFISGCGFHLKNNNGLIEKYPKIYLQSNDTNGQLARFIKIRLRGAGIQIMNQPEANVAIL
KVSPDRQSSRIISLYVNAQNAEKEISYNVNYSIQSPGYQTQDFSVNLYRDFTENASQALAKSREAEILTKELRGIAADSI
IATMLSLENKK
>Mature_171_residues
MQSTVRTFFYTKISLILLSALFISGCGFHLKNNNGLIEKYPKIYLQSNDTNGQLARFIKIRLRGAGIQIMNQPEANVAIL
KVSPDRQSSRIISLYVNAQNAEKEISYNVNYSIQSPGYQTQDFSVNLYRDFTENASQALAKSREAEILTKELRGIAADSI
IATMLSLENKK

Specific function: Together with lptD, is involved in the assembly of LPS in the outer leaflet of the outer membrane [H]

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptE lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786860, Length=160, Percent_Identity=28.125, Blast_Score=80, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007485 [H]

Pfam domain/function: PF04390 RplB [H]

EC number: NA

Molecular weight: Translated: 19232; Mature: 19232

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSTVRTFFYTKISLILLSALFISGCGFHLKNNNGLIEKYPKIYLQSNDTNGQLARFIKI
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECCCEEEEEECCCCCHHEEEEEE
RLRGAGIQIMNQPEANVAILKVSPDRQSSRIISLYVNAQNAEKEISYNVNYSIQSPGYQT
EEECCCEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCC
QDFSVNLYRDFTENASQALAKSREAEILTKELRGIAADSIIATMLSLENKK
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQSTVRTFFYTKISLILLSALFISGCGFHLKNNNGLIEKYPKIYLQSNDTNGQLARFIKI
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECCCEEEEEECCCCCHHEEEEEE
RLRGAGIQIMNQPEANVAILKVSPDRQSSRIISLYVNAQNAEKEISYNVNYSIQSPGYQT
EEECCCEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCC
QDFSVNLYRDFTENASQALAKSREAEILTKELRGIAADSIIATMLSLENKK
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]