| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is kefC [H]
Identifier: 119944863
GI number: 119944863
Start: 1379680
End: 1381341
Strand: Reverse
Name: kefC [H]
Synonym: Ping_1105
Alternate gene names: 119944863
Gene position: 1381341-1379680 (Counterclockwise)
Preceding gene: 119944864
Following gene: 119944862
Centisome position: 30.3
GC content: 38.45
Gene sequence:
>1662_bases ATGTGTCATTGGCATTACTTCTCCCCTTTATCAAATGAGCTTCATATGGATTTTTCTATACTACTTTTTATTGGCACCGC CTTCACCTTCGGTATGGTGGTTAACTTTACTAGCTTACCGCCAATGGTTGGGTTTTTAATAGCGGGTTTTGTCCTTAATT TTTTCGGTTTTGAATCGAGTGAAGGGTTGGTTAGTCTGGCGAATTTAGGTGTCACCTTATTACTCTTTTCTATCGGATTA AAATTAGATATCCGCACCCTCTTTAAAAGCGAAGTTTGGGGAGGTGCGAGTATTCATCTTATCGCCAGTATTATTTTTTA TACCCTGCTGCTCTTGTCCTTAAAAGTGATTGGTTTAATCTTTTTTATTGATCTCAAAATAATGGAGTTAATACTTGTCT CCTTTACATTAAGTTTTTCAAGTACCGTATTTGCGGTGAAAATTCTAGAAGAAAAAAGTGAAACAAACTCACTTTATGGC AGGATAGCAATCGGTATTTTGATTATGCAGGATATTTTTGCTGTCCTGTTTTTAACCGTTTCGATCGGGGAAATGCCATC AATTTGGGCCGTTGCATTATTAGGGTTACCCCTTATCCGCCCTCTTTTATTTAAACTATTAGATAGAGCAGGCCACGGCG AATTATTAGTATTATATGGTTTCTTTTTAGCCTTGGTTGTCGGAGCAGGTTTATTTGAATTTGCCGGCTTAAAGGCAGAT TTAGGCGCGCTAATCGCAGGAATGCTACTTGCGGGACACCCCAGTGCTAAAGATATGGCCAAATCTTTATTTAATTTGAA AGAGCTGTTTTTAATCTGCTTCTTTTTGAGTATCGGCTTGGGTGGATTGCCAAATATTGATCATGTTATGGTTGCAGGCA TTTTATCCATTTTGTTATTAGGAAAAATTACACTTTATTTCCTCACCTTAAGCCGATTTAAATTACGCTCACGGACTTCT CTGTTCACTTCGTTTTCATTGGCAAATTATAGTGAATTTGGCTTAATTGTCGCCGCCCTTGCCACCCATAAAGGTTGGTT ATCTCAAGATTGGTTGATTATCATCGCCATTGCCGTCTCGTTTAGCTTTATTATCGCCTCGTTATTGAATAAATTTTCGG ATACTATCTACAGCCGCTTTAGCCATCCTTTAAAACGTTTTCAGGCAAAACGTTTACATAAAGATGATCGCCCGGTGCGG GTGGGTGATGCACAAATATTAGTGTTAGGGATGGGTCAAATAGGGACAGGCGCCTATGAGGCGCTAAAAATAACCTACGG TGAACGGGTAATGGGGATTGACTACAATCATCAAAAAACCCTAGATCATCGCGCCCATGGAAGACGGGTGATAACCGGTG ATGCGTTAGATTCAGATTTTTGGAATAAATTACAACTAACAGATAATATTAAACTTATTTTATTAGCTATGCCGGATCAT AATGGTAATCGTTATGCGGCAGAGCAACTTAATAAAATTAGCAGTGCCAATTTTAAAGTCGCAGCACTTGCCCATTATAA AAGCGATCAAGCGGAATTAAATGAATTTGGTGTTAATCAAGTTTACAATATGTATGAGGAAGCAGGCTCTGGTTTTGCGC GCCATGTTTGTTCTGAATTACAGATTTCATTGCTAAAAGATCACCATAAACAAGAGTTATAA
Upstream 100 bases:
>100_bases TATTGTAAAATATTATAAAATCAATTTACCACCGTTTTTTATTAAAAGGTTTTAAATGCGCAGGAAAATATAATAAAAGC AGCAATCAAGTTGAACCGCA
Downstream 100 bases:
>100_bases TCATTCATTTGTCCAAATAGACTTATTTATAACTTATTACTGTGATTTAGTGTGACTTTTATTGATTATTCTGCAAAAAT CGTCTATCAAATTATTGTTT
Product: glutathione-regulated potassium-efflux system protein KefC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MCHWHYFSPLSNELHMDFSILLFIGTAFTFGMVVNFTSLPPMVGFLIAGFVLNFFGFESSEGLVSLANLGVTLLLFSIGL KLDIRTLFKSEVWGGASIHLIASIIFYTLLLLSLKVIGLIFFIDLKIMELILVSFTLSFSSTVFAVKILEEKSETNSLYG RIAIGILIMQDIFAVLFLTVSIGEMPSIWAVALLGLPLIRPLLFKLLDRAGHGELLVLYGFFLALVVGAGLFEFAGLKAD LGALIAGMLLAGHPSAKDMAKSLFNLKELFLICFFLSIGLGGLPNIDHVMVAGILSILLLGKITLYFLTLSRFKLRSRTS LFTSFSLANYSEFGLIVAALATHKGWLSQDWLIIIAIAVSFSFIIASLLNKFSDTIYSRFSHPLKRFQAKRLHKDDRPVR VGDAQILVLGMGQIGTGAYEALKITYGERVMGIDYNHQKTLDHRAHGRRVITGDALDSDFWNKLQLTDNIKLILLAMPDH NGNRYAAEQLNKISSANFKVAALAHYKSDQAELNEFGVNQVYNMYEEAGSGFARHVCSELQISLLKDHHKQEL
Sequences:
>Translated_553_residues MCHWHYFSPLSNELHMDFSILLFIGTAFTFGMVVNFTSLPPMVGFLIAGFVLNFFGFESSEGLVSLANLGVTLLLFSIGL KLDIRTLFKSEVWGGASIHLIASIIFYTLLLLSLKVIGLIFFIDLKIMELILVSFTLSFSSTVFAVKILEEKSETNSLYG RIAIGILIMQDIFAVLFLTVSIGEMPSIWAVALLGLPLIRPLLFKLLDRAGHGELLVLYGFFLALVVGAGLFEFAGLKAD LGALIAGMLLAGHPSAKDMAKSLFNLKELFLICFFLSIGLGGLPNIDHVMVAGILSILLLGKITLYFLTLSRFKLRSRTS LFTSFSLANYSEFGLIVAALATHKGWLSQDWLIIIAIAVSFSFIIASLLNKFSDTIYSRFSHPLKRFQAKRLHKDDRPVR VGDAQILVLGMGQIGTGAYEALKITYGERVMGIDYNHQKTLDHRAHGRRVITGDALDSDFWNKLQLTDNIKLILLAMPDH NGNRYAAEQLNKISSANFKVAALAHYKSDQAELNEFGVNQVYNMYEEAGSGFARHVCSELQISLLKDHHKQEL >Mature_553_residues MCHWHYFSPLSNELHMDFSILLFIGTAFTFGMVVNFTSLPPMVGFLIAGFVLNFFGFESSEGLVSLANLGVTLLLFSIGL KLDIRTLFKSEVWGGASIHLIASIIFYTLLLLSLKVIGLIFFIDLKIMELILVSFTLSFSSTVFAVKILEEKSETNSLYG RIAIGILIMQDIFAVLFLTVSIGEMPSIWAVALLGLPLIRPLLFKLLDRAGHGELLVLYGFFLALVVGAGLFEFAGLKAD LGALIAGMLLAGHPSAKDMAKSLFNLKELFLICFFLSIGLGGLPNIDHVMVAGILSILLLGKITLYFLTLSRFKLRSRTS LFTSFSLANYSEFGLIVAALATHKGWLSQDWLIIIAIAVSFSFIIASLLNKFSDTIYSRFSHPLKRFQAKRLHKDDRPVR VGDAQILVLGMGQIGTGAYEALKITYGERVMGIDYNHQKTLDHRAHGRRVITGDALDSDFWNKLQLTDNIKLILLAMPDH NGNRYAAEQLNKISSANFKVAALAHYKSDQAELNEFGVNQVYNMYEEAGSGFARHVCSELQISLLKDHHKQEL
Specific function: Unknown
COG id: COG4651
COG function: function code P; Kef-type K+ transport system, predicted NAD-binding component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1786685, Length=531, Percent_Identity=27.3069679849341, Blast_Score=122, Evalue=5e-29, Organism=Escherichia coli, GI1786232, Length=486, Percent_Identity=26.9547325102881, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1789749, Length=475, Percent_Identity=25.4736842105263, Blast_Score=77, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 61338; Mature: 61338
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: PS00014 ER_TARGET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCHWHYFSPLSNELHMDFSILLFIGTAFTFGMVVNFTSLPPMVGFLIAGFVLNFFGFESS CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC EGLVSLANLGVTLLLFSIGLKLDIRTLFKSEVWGGASIHLIASIIFYTLLLLSLKVIGLI CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FFIDLKIMELILVSFTLSFSSTVFAVKILEEKSETNSLYGRIAIGILIMQDIFAVLFLTV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIGEMPSIWAVALLGLPLIRPLLFKLLDRAGHGELLVLYGFFLALVVGAGLFEFAGLKAD HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHCCCHHH LGALIAGMLLAGHPSAKDMAKSLFNLKELFLICFFLSIGLGGLPNIDHVMVAGILSILLL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GKITLYFLTLSRFKLRSRTSLFTSFSLANYSEFGLIVAALATHKGWLSQDWLIIIAIAVS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH FSFIIASLLNKFSDTIYSRFSHPLKRFQAKRLHKDDRPVRVGDAQILVLGMGQIGTGAYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECCCCCCCHHH ALKITYGERVMGIDYNHQKTLDHRAHGRRVITGDALDSDFWNKLQLTDNIKLILLAMPDH HEEEEECCEEEECCCCCHHHHHHHHCCCEEEECCCCCCHHHCCEEECCCEEEEEEEECCC NGNRYAAEQLNKISSANFKVAALAHYKSDQAELNEFGVNQVYNMYEEAGSGFARHVCSEL CCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH QISLLKDHHKQEL HHHHHHHHHHCCC >Mature Secondary Structure MCHWHYFSPLSNELHMDFSILLFIGTAFTFGMVVNFTSLPPMVGFLIAGFVLNFFGFESS CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC EGLVSLANLGVTLLLFSIGLKLDIRTLFKSEVWGGASIHLIASIIFYTLLLLSLKVIGLI CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FFIDLKIMELILVSFTLSFSSTVFAVKILEEKSETNSLYGRIAIGILIMQDIFAVLFLTV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIGEMPSIWAVALLGLPLIRPLLFKLLDRAGHGELLVLYGFFLALVVGAGLFEFAGLKAD HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHCCCHHH LGALIAGMLLAGHPSAKDMAKSLFNLKELFLICFFLSIGLGGLPNIDHVMVAGILSILLL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GKITLYFLTLSRFKLRSRTSLFTSFSLANYSEFGLIVAALATHKGWLSQDWLIIIAIAVS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH FSFIIASLLNKFSDTIYSRFSHPLKRFQAKRLHKDDRPVRVGDAQILVLGMGQIGTGAYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECCCCCCCHHH ALKITYGERVMGIDYNHQKTLDHRAHGRRVITGDALDSDFWNKLQLTDNIKLILLAMPDH HEEEEECCEEEECCCCCHHHHHHHHCCCEEEECCCCCCHHHCCEEECCCEEEEEEEECCC NGNRYAAEQLNKISSANFKVAALAHYKSDQAELNEFGVNQVYNMYEEAGSGFARHVCSEL CCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH QISLLKDHHKQEL HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 7721718 [H]