| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yceF [C]
Identifier: 119944841
GI number: 119944841
Start: 1355285
End: 1355869
Strand: Reverse
Name: yceF [C]
Synonym: Ping_1083
Alternate gene names: 119944841
Gene position: 1355869-1355285 (Counterclockwise)
Preceding gene: 119944856
Following gene: 119944839
Centisome position: 29.74
GC content: 40.85
Gene sequence:
>585_bases ATGTCTCAGAAACTGATCTTAGCTTCCACCTCGCCTTTTCGGAAAGAATTATTAGATAAGCTCAATCTGGTATTTGATAC GGCAAAACCTGATGTTGATGAAACACCGCTGCCTGAAGAGACGGCCACTGCACTGGTTGAACGTTTAGCAATAGCCAAAG CACAAGCCATTGCGCCTGAATTTACTGACGCATTAATCATTGGATCTGATCAAGTCTGTGTGAATCAAGGGCAAATTCTT GGTAAACCCGGTAATATCGCTAATGCCTTTGCGCAATTAAAAGCCGCCAGTGGGAAGCGTATAACTTTTTACACTGGCCT TGCATTGCTTAATACTCAAACAGGTACTGTGCAATCACTGGTTGAGCCTTATGTGGTACAGTTCCGAGCATTAAGTGATC AAATGATCAACCATTATCTGGAAAAAGAACAACCTTTCAATTGTGCCGGCAGCTTTAAAAGTGAAGGTTTTGGCATTGCT CTTTTTGAATCATTAGAAGGAAAAGATCCAAACAGCCTGATTGGATTACCCCTTATATCATTAATTAACATGTTGGAAAA AGAGAATTTTCCCGTGCTAGGTTAA
Upstream 100 bases:
>100_bases ATTCGTCATTCATATAAAATATTTTTTAAGCTAAACTATCGCTTTATTATTTGTCTCGCCATAAAATGCGTTAACCTTAA ATTTTAACAGAGAGCATTAT
Downstream 100 bases:
>100_bases GTCCTTTTTACCCTAAACGTTTAACTATTTTTAATCCTTAAACGTTTAGGATATTATCCTATACTTACTAACTGCTCGTG TAACTTAGTCACCTCATCTC
Product: maf protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSQKLILASTSPFRKELLDKLNLVFDTAKPDVDETPLPEETATALVERLAIAKAQAIAPEFTDALIIGSDQVCVNQGQIL GKPGNIANAFAQLKAASGKRITFYTGLALLNTQTGTVQSLVEPYVVQFRALSDQMINHYLEKEQPFNCAGSFKSEGFGIA LFESLEGKDPNSLIGLPLISLINMLEKENFPVLG
Sequences:
>Translated_194_residues MSQKLILASTSPFRKELLDKLNLVFDTAKPDVDETPLPEETATALVERLAIAKAQAIAPEFTDALIIGSDQVCVNQGQIL GKPGNIANAFAQLKAASGKRITFYTGLALLNTQTGTVQSLVEPYVVQFRALSDQMINHYLEKEQPFNCAGSFKSEGFGIA LFESLEGKDPNSLIGLPLISLINMLEKENFPVLG >Mature_193_residues SQKLILASTSPFRKELLDKLNLVFDTAKPDVDETPLPEETATALVERLAIAKAQAIAPEFTDALIIGSDQVCVNQGQILG KPGNIANAFAQLKAASGKRITFYTGLALLNTQTGTVQSLVEPYVVQFRALSDQMINHYLEKEQPFNCAGSFKSEGFGIAL FESLEGKDPNSLIGLPLISLINMLEKENFPVLG
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Homo sapiens, GI117553627, Length=209, Percent_Identity=26.3157894736842, Blast_Score=73, Evalue=1e-13, Organism=Escherichia coli, GI87081830, Length=192, Percent_Identity=58.3333333333333, Blast_Score=226, Evalue=6e-61, Organism=Escherichia coli, GI1789646, Length=190, Percent_Identity=32.6315789473684, Blast_Score=92, Evalue=3e-20, Organism=Caenorhabditis elegans, GI193202443, Length=192, Percent_Identity=30.7291666666667, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 21027; Mature: 20896
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKLILASTSPFRKELLDKLNLVFDTAKPDVDETPLPEETATALVERLAIAKAQAIAPE CCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC FTDALIIGSDQVCVNQGQILGKPGNIANAFAQLKAASGKRITFYTGLALLNTQTGTVQSL CCCEEEECCCCEEECCCEEECCCCCHHHHHHHHHHCCCCEEEEEECEEHEECCCCHHHHH VEPYVVQFRALSDQMINHYLEKEQPFNCAGSFKSEGFGIALFESLEGKDPNSLIGLPLIS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHH LINMLEKENFPVLG HHHHHHHCCCCCCC >Mature Secondary Structure SQKLILASTSPFRKELLDKLNLVFDTAKPDVDETPLPEETATALVERLAIAKAQAIAPE CCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC FTDALIIGSDQVCVNQGQILGKPGNIANAFAQLKAASGKRITFYTGLALLNTQTGTVQSL CCCEEEECCCCEEECCCEEECCCCCHHHHHHHHHHCCCCEEEEEECEEHEECCCCHHHHH VEPYVVQFRALSDQMINHYLEKEQPFNCAGSFKSEGFGIALFESLEGKDPNSLIGLPLIS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHH LINMLEKENFPVLG HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA