| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944802
Identifier: 119944802
GI number: 119944802
Start: 1316806
End: 1317792
Strand: Reverse
Name: 119944802
Synonym: Ping_1044
Alternate gene names: NA
Gene position: 1317792-1316806 (Counterclockwise)
Preceding gene: 119944804
Following gene: 119944801
Centisome position: 28.9
GC content: 40.22
Gene sequence:
>987_bases ATGACTTCAGTAAAAAAAGGAATTTTCACCAGCCTTGCGCTCATTGTATTGATACTGTGGATAGTATCAATTTGGTGGGG ATTCCCCCCCGCAGCCTATGATGTAAAAACGAAAGCGCTAGAAACAGCTAAAATAAATAACCATAAAATAGTGCCTGGTT ATACAATAACGACAACCTTAATAGATGTCACAAGCTGGTTAATTGAAAAACCTGGCGGATTTTTCTCAAATGATGTCACA CCACCAGGATTATTCATGGATAATGTGCCGGCTTTTGAATATGGCGCCCTCAAACAGATAAGAGATTTATCATTAGCCAT GCGTTTAAATTTTAGCCGCTCACCATCCCAGACAACGGGTGATAATGATTTAGAAAAAGCACAGGAAAAAATTAACACTT CGCACAAAAATTGGGCGCTGCCAAGTGCTGAAAAAGAGTACCGACAAGCTATTGCCTCTCTGGTGCGTTATCGCACACGT TTAGTTAAAAACAGTCAAAATGAGGCACAATTTTACACCAGAGCAGATAATTTAAGTGCTTGGTTAAGTGCCGTGGAAAA GCGTTTAGGCTCTCTCTCACAACGCTTAAGCTCAAGTGTTGGGCAAGACAGTTATAACATCGTATTAGCCGGTGATTCCA GTACCAAGCAATCAACCGAAACAGCACAGCAGATGCAAATAAAAACCCCTTGGTTTCAAATTGATGACGTGTTTTATGAA AGTCGCGGTGCAACCTGGGCTATTTTGCATTTTTTGAAAGCCATCGAGGTTGATTTCACTGATGTCTTAGAAAAGAAAAA TGCACAAGTCAGTTTAAATAAAATAATTAAAGACTTAGAATCAACGCAAGCTGTTGTTTGGAGTCCGGTTATTTTAAATG GCAGTGGGTTTGGTCTATTGGCAAACCATTCATCGGTGATGGCAAGTTATGTATCGCGTGCCAACGTTGCCTTAATCGAT CTGCGTCGTTTATTAGAGCAAGGTTAA
Upstream 100 bases:
>100_bases ATTAATCTTTGTCTAAAGCAGACACTAAAATCTTAAACGCTTGTTATTGATTAATTAACTCTTTAAAATATTTTTCCGAA TATCAAGATTAGGGACTAAA
Downstream 100 bases:
>100_bases ACGCGCGGTCGCAATACGACAGCGATCGGCCTTCAGTTGATTTGGGTATAGCCGTTTTGGCGGTAAATGTCCTCGAGTTG TTGACAGCAAAAAATAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MTSVKKGIFTSLALIVLILWIVSIWWGFPPAAYDVKTKALETAKINNHKIVPGYTITTTLIDVTSWLIEKPGGFFSNDVT PPGLFMDNVPAFEYGALKQIRDLSLAMRLNFSRSPSQTTGDNDLEKAQEKINTSHKNWALPSAEKEYRQAIASLVRYRTR LVKNSQNEAQFYTRADNLSAWLSAVEKRLGSLSQRLSSSVGQDSYNIVLAGDSSTKQSTETAQQMQIKTPWFQIDDVFYE SRGATWAILHFLKAIEVDFTDVLEKKNAQVSLNKIIKDLESTQAVVWSPVILNGSGFGLLANHSSVMASYVSRANVALID LRRLLEQG
Sequences:
>Translated_328_residues MTSVKKGIFTSLALIVLILWIVSIWWGFPPAAYDVKTKALETAKINNHKIVPGYTITTTLIDVTSWLIEKPGGFFSNDVT PPGLFMDNVPAFEYGALKQIRDLSLAMRLNFSRSPSQTTGDNDLEKAQEKINTSHKNWALPSAEKEYRQAIASLVRYRTR LVKNSQNEAQFYTRADNLSAWLSAVEKRLGSLSQRLSSSVGQDSYNIVLAGDSSTKQSTETAQQMQIKTPWFQIDDVFYE SRGATWAILHFLKAIEVDFTDVLEKKNAQVSLNKIIKDLESTQAVVWSPVILNGSGFGLLANHSSVMASYVSRANVALID LRRLLEQG >Mature_327_residues TSVKKGIFTSLALIVLILWIVSIWWGFPPAAYDVKTKALETAKINNHKIVPGYTITTTLIDVTSWLIEKPGGFFSNDVTP PGLFMDNVPAFEYGALKQIRDLSLAMRLNFSRSPSQTTGDNDLEKAQEKINTSHKNWALPSAEKEYRQAIASLVRYRTRL VKNSQNEAQFYTRADNLSAWLSAVEKRLGSLSQRLSSSVGQDSYNIVLAGDSSTKQSTETAQQMQIKTPWFQIDDVFYES RGATWAILHFLKAIEVDFTDVLEKKNAQVSLNKIIKDLESTQAVVWSPVILNGSGFGLLANHSSVMASYVSRANVALIDL RRLLEQG
Specific function: Unknown
COG id: COG5345
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36613; Mature: 36482
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVKKGIFTSLALIVLILWIVSIWWGFPPAAYDVKTKALETAKINNHKIVPGYTITTTL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEECCCCCHHHHH IDVTSWLIEKPGGFFSNDVTPPGLFMDNVPAFEYGALKQIRDLSLAMRLNFSRSPSQTTG HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCC DNDLEKAQEKINTSHKNWALPSAEKEYRQAIASLVRYRTRLVKNSQNEAQFYTRADNLSA CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH WLSAVEKRLGSLSQRLSSSVGQDSYNIVLAGDSSTKQSTETAQQMQIKTPWFQIDDVFYE HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEHHHHHHH SRGATWAILHFLKAIEVDFTDVLEKKNAQVSLNKIIKDLESTQAVVWSPVILNGSGFGLL CCCCHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEEEECCCCCEEE ANHSSVMASYVSRANVALIDLRRLLEQG ECHHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure TSVKKGIFTSLALIVLILWIVSIWWGFPPAAYDVKTKALETAKINNHKIVPGYTITTTL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEECCCCCHHHHH IDVTSWLIEKPGGFFSNDVTPPGLFMDNVPAFEYGALKQIRDLSLAMRLNFSRSPSQTTG HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCC DNDLEKAQEKINTSHKNWALPSAEKEYRQAIASLVRYRTRLVKNSQNEAQFYTRADNLSA CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH WLSAVEKRLGSLSQRLSSSVGQDSYNIVLAGDSSTKQSTETAQQMQIKTPWFQIDDVFYE HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEHHHHHHH SRGATWAILHFLKAIEVDFTDVLEKKNAQVSLNKIIKDLESTQAVVWSPVILNGSGFGLL CCCCHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEEEECCCCCEEE ANHSSVMASYVSRANVALIDLRRLLEQG ECHHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA