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The map label for this gene is degQ [H]

Identifier: 119944795

GI number: 119944795

Start: 1308678

End: 1310054

Strand: Reverse

Name: degQ [H]

Synonym: Ping_1037

Alternate gene names: 119944795

Gene position: 1310054-1308678 (Counterclockwise)

Preceding gene: 119944796

Following gene: 119944794

Centisome position: 28.73

GC content: 42.56

Gene sequence:

>1377_bases
ATGAAGATAAAATCAGCTCGGTTATTAGTGATGATGCTTTGCCTGAGTTTAAGTTACAGCGTAAATTCAGCAATACCTAA
TGTTACGGCCCAGGGAAAACCTTTTCCATCTCTTGCACCAATGTTGAAAAAAGTGAATTCCGCAGTGGTTAATATCGCCA
CCTATTCAACCAAACAGGCGTTAGTCAATCCCTTATTAAATGACCCTTTTTTCAGGCACTTCTTTGATATCCCAGAGCAG
GGAAATTTACAACAGAAAGCACCTCAAAAGCGCCAGAAAAGTGCCGGTTCCGGGGTGATAATCAATGCTCAAGATGGCAT
CGTCATGACCAATTACCATGTAATAAAAGACGCTGATGAAGTGCAGGTTTCATTGATCGACGGACGCAGTTATAAAGCGA
AAATAATAGGTTCAGACCCAGAATTGGATATTGCTATACTGTCAATAAAAGCTAAAAAATTGACGCAGGTAACAATATCC
GAGTCGATTCTTTTAGAAGTTGGTGATTTTGTCGTTGCCATTGGCAATCCCTTTGGTTTAGGTCAAACAGTGACTACGGG
TATTGTCAGTGCGCTCGGACGCAGTGGTTTAGGGATAGAAGGTTATGAAAACTTTATCCAAACCGATGCCTCTATTAATC
CGGGTAATTCCGGGGGAGCACTGGTTAATTTGAATGGTGAATTGGTCGGTATCAATACGGCTATTATTGCGCCGGCAGGC
GGGAATATAGGAATAGGATTTGCCATTCCAATCAATATGGCTGAAGCAAGCATGCAGAAAATCATAAAATACGGTGAGGT
TAAACGCGGTCAGATTGGTGTTTCTATTCAGGATATTACGCGAGATTTAAGCGAGGCACTGGGCCTTGAAAATGGTCAAC
TGGGTGTACTTGTTGCGGGTGTAACAAAAGGCTCTCCCGCTGAAAAAGCGGGGTTAATCCCGGGCGATATTATCACCGGT
GTTGATGGTCAACTAACCAAATCTACCGGACAGTTACGTAGCCAAATAGGCTTGAAAAGTATCGGTGATACGGTCAAGGT
TACATTATTGCATAATGGCATTAAAAAAACAGTGGATGTTGGCATTGGCAAACCACAAACCTTGAGTACTGCAGATTCAT
CCGGAGAATTGCACCCTTTACTTGAGGGCGTTTCATTTGCCAATAATAACAAGGGACAAGGTGTAAAGGTCACCGAAGTA
CAGGCAAATTCTCCGGCCGCCTACAGCGGGTTAGAGGAAGGTGATCTGATTATCGCCACGAATAAACATAGCGTTGATGA
TTTATTATCCTTTAAAAAAGCGCTGGGACTTGCTAAGAACAGCATCTTATTACAGGTCAACCGCAATGGAATGTCTTTAT
TTATTGCCATTCGTTAA

Upstream 100 bases:

>100_bases
GCCAAAAAATTTAACCGGTGAAACGCCCTTTTGTAAGTTAACTAAGTGCTCAATTTATACTATTTCTCATCAATTGTTTA
ATTAACGTTAAGGAAAAAAC

Downstream 100 bases:

>100_bases
TTAAAAACATGCACATTGTTGCTGCGTGGTGAATCATTTTACCACGCAGCATAAACTGAATTTCCTCAAATACCTCCCCT
TTTTTATCTTCGCCAAAAGT

Product: protease Do

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MKIKSARLLVMMLCLSLSYSVNSAIPNVTAQGKPFPSLAPMLKKVNSAVVNIATYSTKQALVNPLLNDPFFRHFFDIPEQ
GNLQQKAPQKRQKSAGSGVIINAQDGIVMTNYHVIKDADEVQVSLIDGRSYKAKIIGSDPELDIAILSIKAKKLTQVTIS
ESILLEVGDFVVAIGNPFGLGQTVTTGIVSALGRSGLGIEGYENFIQTDASINPGNSGGALVNLNGELVGINTAIIAPAG
GNIGIGFAIPINMAEASMQKIIKYGEVKRGQIGVSIQDITRDLSEALGLENGQLGVLVAGVTKGSPAEKAGLIPGDIITG
VDGQLTKSTGQLRSQIGLKSIGDTVKVTLLHNGIKKTVDVGIGKPQTLSTADSSGELHPLLEGVSFANNNKGQGVKVTEV
QANSPAAYSGLEEGDLIIATNKHSVDDLLSFKKALGLAKNSILLQVNRNGMSLFIAIR

Sequences:

>Translated_458_residues
MKIKSARLLVMMLCLSLSYSVNSAIPNVTAQGKPFPSLAPMLKKVNSAVVNIATYSTKQALVNPLLNDPFFRHFFDIPEQ
GNLQQKAPQKRQKSAGSGVIINAQDGIVMTNYHVIKDADEVQVSLIDGRSYKAKIIGSDPELDIAILSIKAKKLTQVTIS
ESILLEVGDFVVAIGNPFGLGQTVTTGIVSALGRSGLGIEGYENFIQTDASINPGNSGGALVNLNGELVGINTAIIAPAG
GNIGIGFAIPINMAEASMQKIIKYGEVKRGQIGVSIQDITRDLSEALGLENGQLGVLVAGVTKGSPAEKAGLIPGDIITG
VDGQLTKSTGQLRSQIGLKSIGDTVKVTLLHNGIKKTVDVGIGKPQTLSTADSSGELHPLLEGVSFANNNKGQGVKVTEV
QANSPAAYSGLEEGDLIIATNKHSVDDLLSFKKALGLAKNSILLQVNRNGMSLFIAIR
>Mature_458_residues
MKIKSARLLVMMLCLSLSYSVNSAIPNVTAQGKPFPSLAPMLKKVNSAVVNIATYSTKQALVNPLLNDPFFRHFFDIPEQ
GNLQQKAPQKRQKSAGSGVIINAQDGIVMTNYHVIKDADEVQVSLIDGRSYKAKIIGSDPELDIAILSIKAKKLTQVTIS
ESILLEVGDFVVAIGNPFGLGQTVTTGIVSALGRSGLGIEGYENFIQTDASINPGNSGGALVNLNGELVGINTAIIAPAG
GNIGIGFAIPINMAEASMQKIIKYGEVKRGQIGVSIQDITRDLSEALGLENGQLGVLVAGVTKGSPAEKAGLIPGDIITG
VDGQLTKSTGQLRSQIGLKSIGDTVKVTLLHNGIKKTVDVGIGKPQTLSTADSSGELHPLLEGVSFANNNKGQGVKVTEV
QANSPAAYSGLEEGDLIIATNKHSVDDLLSFKKALGLAKNSILLQVNRNGMSLFIAIR

Specific function: Protease with a shared specificity with degP [H]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PDZ (DHR) domains [H]

Homologues:

Organism=Homo sapiens, GI4506141, Length=245, Percent_Identity=38.3673469387755, Blast_Score=139, Evalue=8e-33,
Organism=Homo sapiens, GI22129776, Length=263, Percent_Identity=38.0228136882129, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI7019477, Length=253, Percent_Identity=38.7351778656126, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI24308541, Length=249, Percent_Identity=34.136546184739, Blast_Score=129, Evalue=6e-30,
Organism=Escherichia coli, GI1789629, Length=466, Percent_Identity=45.9227467811159, Blast_Score=355, Evalue=2e-99,
Organism=Escherichia coli, GI1786356, Length=442, Percent_Identity=43.2126696832579, Blast_Score=324, Evalue=6e-90,
Organism=Escherichia coli, GI1789630, Length=278, Percent_Identity=42.0863309352518, Blast_Score=182, Evalue=5e-47,
Organism=Drosophila melanogaster, GI24646839, Length=279, Percent_Identity=34.4086021505376, Blast_Score=140, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR011782
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.-

Molecular weight: Translated: 48011; Mature: 48011

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKSARLLVMMLCLSLSYSVNSAIPNVTAQGKPFPSLAPMLKKVNSAVVNIATYSTKQA
CCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCHHHH
LVNPLLNDPFFRHFFDIPEQGNLQQKAPQKRQKSAGSGVIINAQDGIVMTNYHVIKDADE
HHHHHHCCHHHHHHHCCCCCCCCHHHCHHHHHHCCCCCEEEECCCCEEEEEEEEEECCCC
VQVSLIDGRSYKAKIIGSDPELDIAILSIKAKKLTQVTISESILLEVGDFVVAIGNPFGL
EEEEEEECCCEEEEEECCCCCCEEEEEEEECCCEEEEEECHHHHEEECCEEEEECCCCCC
GQTVTTGIVSALGRSGLGIEGYENFIQTDASINPGNSGGALVNLNGELVGINTAIIAPAG
CHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCEEEEEEEEEEEECC
GNIGIGFAIPINMAEASMQKIIKYGEVKRGQIGVSIQDITRDLSEALGLENGQLGVLVAG
CCEEEEEEEECCHHHHHHHHHHHHCCCCCCEECEEHHHHHHHHHHHHCCCCCCEEEEEEE
VTKGSPAEKAGLIPGDIITGVDGQLTKSTGQLRSQIGLKSIGDTVKVTLLHNGIKKTVDV
ECCCCCCHHCCCCCCHHEECCCCCEEHHHHHHHHHCCHHHCCCEEEEEEECCCCHHHHCC
GIGKPQTLSTADSSGELHPLLEGVSFANNNKGQGVKVTEVQANSPAAYSGLEEGDLIIAT
CCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHCCCCCCCEEEEE
NKHSVDDLLSFKKALGLAKNSILLQVNRNGMSLFIAIR
CCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEC
>Mature Secondary Structure
MKIKSARLLVMMLCLSLSYSVNSAIPNVTAQGKPFPSLAPMLKKVNSAVVNIATYSTKQA
CCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCHHHH
LVNPLLNDPFFRHFFDIPEQGNLQQKAPQKRQKSAGSGVIINAQDGIVMTNYHVIKDADE
HHHHHHCCHHHHHHHCCCCCCCCHHHCHHHHHHCCCCCEEEECCCCEEEEEEEEEECCCC
VQVSLIDGRSYKAKIIGSDPELDIAILSIKAKKLTQVTISESILLEVGDFVVAIGNPFGL
EEEEEEECCCEEEEEECCCCCCEEEEEEEECCCEEEEEECHHHHEEECCEEEEECCCCCC
GQTVTTGIVSALGRSGLGIEGYENFIQTDASINPGNSGGALVNLNGELVGINTAIIAPAG
CHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCEEEEEEEEEEEECC
GNIGIGFAIPINMAEASMQKIIKYGEVKRGQIGVSIQDITRDLSEALGLENGQLGVLVAG
CCEEEEEEEECCHHHHHHHHHHHHCCCCCCEECEEHHHHHHHHHHHHCCCCCCEEEEEEE
VTKGSPAEKAGLIPGDIITGVDGQLTKSTGQLRSQIGLKSIGDTVKVTLLHNGIKKTVDV
ECCCCCCHHCCCCCCHHEECCCCCEEHHHHHHHHHCCHHHCCCEEEEEEECCCCHHHHCC
GIGKPQTLSTADSSGELHPLLEGVSFANNNKGQGVKVTEVQANSPAAYSGLEEGDLIIAT
CCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHCCCCCCCEEEEE
NKHSVDDLLSFKKALGLAKNSILLQVNRNGMSLFIAIR
CCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8576051; 9278503 [H]