| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is paaC [H]
Identifier: 119944424
GI number: 119944424
Start: 838299
End: 839057
Strand: Direct
Name: paaC [H]
Synonym: Ping_0652
Alternate gene names: 119944424
Gene position: 838299-839057 (Clockwise)
Preceding gene: 119944423
Following gene: 119944425
Centisome position: 18.39
GC content: 38.34
Gene sequence:
>759_bases ATGAATAATATTGATCCTAAACTACAATATGTACTGCAGCTAGCTGATACTAGTTTTGTATTATCACATCGTTTAGCGGA ACTCTGCGGTATTGCGCCTGAGCTTGAAATTGATTTAGCGCTGACCAATATCAGTTTAGATCTGCTTGGCGAAGCGCGTA ATTTATATCAATATGCGGGTGAATTCGATACTGAAAATCGCAAAGAAGACGATTTTGCTTATTTTCGAGATCAATCTGCT TATTATAATCTGCTCTTAAGTGAACAGCCGAACGAAGGCTTTGATATTACTATCACACGCCAATACCTATTTGATGTTTT TCACTATCATTTCTTAACAGAACTTCAAAATAGTAGCGATCCTCAATTAGTCGTTATTGCAAAAAAATCAATTAAAGAAG CCAGCTACCATAAACGTTTCAGCCAGAATTGGATGATTCGATTAGGTGATGGCACGGCTCAAAGTAATCAAAAAATGCAA ATGGCACTCAATGAAATGTGGCGCTTCAGTCATGAAATGTTTACCCCGACAGACAATGAGAAAAACCTTATTTCACAAGG TTTTGCTGTTGATGTTCAAGCATTGCAGCCAACGTGGCAACAGGAAATAGAAAGCACATTAGCCAAGGCAAATCTTGTTC TACCTAAAACAACAAACACCCGCCAAGGTGGCAAGGAAGGTTTACACAGTGAACATCTTGGTTTTCTGTTAGCTGAAATG CAGCACATACAAAGATCTTATCCTAACTGTGAATGGTAG
Upstream 100 bases:
>100_bases CGGTCCGCTTTTTGAACCGGCAGATGATAAAATTTACCGTCATGCTCGTTTTTATACTATTCCATCTAACATTAAGCATA TGTAATTCAAGGAGTTAAGA
Downstream 100 bases:
>100_bases GGGTTGAAATGGTTGTTAAAAATTTAGAAACGCTTGATCATCCTCAAAAAGTATCAGCCTGGAAATTACTTTCAGCGATA CCGGATCCAGAAATTCCAGC
Product: phenylacetate-CoA oxygenase, PaaI subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MNNIDPKLQYVLQLADTSFVLSHRLAELCGIAPELEIDLALTNISLDLLGEARNLYQYAGEFDTENRKEDDFAYFRDQSA YYNLLLSEQPNEGFDITITRQYLFDVFHYHFLTELQNSSDPQLVVIAKKSIKEASYHKRFSQNWMIRLGDGTAQSNQKMQ MALNEMWRFSHEMFTPTDNEKNLISQGFAVDVQALQPTWQQEIESTLAKANLVLPKTTNTRQGGKEGLHSEHLGFLLAEM QHIQRSYPNCEW
Sequences:
>Translated_252_residues MNNIDPKLQYVLQLADTSFVLSHRLAELCGIAPELEIDLALTNISLDLLGEARNLYQYAGEFDTENRKEDDFAYFRDQSA YYNLLLSEQPNEGFDITITRQYLFDVFHYHFLTELQNSSDPQLVVIAKKSIKEASYHKRFSQNWMIRLGDGTAQSNQKMQ MALNEMWRFSHEMFTPTDNEKNLISQGFAVDVQALQPTWQQEIESTLAKANLVLPKTTNTRQGGKEGLHSEHLGFLLAEM QHIQRSYPNCEW >Mature_252_residues MNNIDPKLQYVLQLADTSFVLSHRLAELCGIAPELEIDLALTNISLDLLGEARNLYQYAGEFDTENRKEDDFAYFRDQSA YYNLLLSEQPNEGFDITITRQYLFDVFHYHFLTELQNSSDPQLVVIAKKSIKEASYHKRFSQNWMIRLGDGTAQSNQKMQ MALNEMWRFSHEMFTPTDNEKNLISQGFAVDVQALQPTWQQEIESTLAKANLVLPKTTNTRQGGKEGLHSEHLGFLLAEM QHIQRSYPNCEW
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787656, Length=243, Percent_Identity=51.0288065843621, Blast_Score=252, Evalue=2e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011882 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 29164; Mature: 29164
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNIDPKLQYVLQLADTSFVLSHRLAELCGIAPELEIDLALTNISLDLLGEARNLYQYAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHHC EFDTENRKEDDFAYFRDQSAYYNLLLSEQPNEGFDITITRQYLFDVFHYHFLTELQNSSD CCCCCCCCCCCHHHHCCCCHHEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCC PQLVVIAKKSIKEASYHKRFSQNWMIRLGDGTAQSNQKMQMALNEMWRFSHEMFTPTDNE CCEEEEECHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC KNLISQGFAVDVQALQPTWQQEIESTLAKANLVLPKTTNTRQGGKEGLHSEHLGFLLAEM HHHHHCCCEEEHHHHCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHH QHIQRSYPNCEW HHHHHCCCCCCC >Mature Secondary Structure MNNIDPKLQYVLQLADTSFVLSHRLAELCGIAPELEIDLALTNISLDLLGEARNLYQYAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHHC EFDTENRKEDDFAYFRDQSAYYNLLLSEQPNEGFDITITRQYLFDVFHYHFLTELQNSSD CCCCCCCCCCCHHHHCCCCHHEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCC PQLVVIAKKSIKEASYHKRFSQNWMIRLGDGTAQSNQKMQMALNEMWRFSHEMFTPTDNE CCEEEEECHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC KNLISQGFAVDVQALQPTWQQEIESTLAKANLVLPKTTNTRQGGKEGLHSEHLGFLLAEM HHHHHCCCEEEHHHHCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHH QHIQRSYPNCEW HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]