| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is pheA [H]
Identifier: 119944399
GI number: 119944399
Start: 808190
End: 809020
Strand: Direct
Name: pheA [H]
Synonym: Ping_0627
Alternate gene names: 119944399
Gene position: 808190-809020 (Clockwise)
Preceding gene: 119944398
Following gene: 119944401
Centisome position: 17.73
GC content: 39.59
Gene sequence:
>831_bases ATGCCTAAAATTGCTACCCTTGGTCCTAAAGAAACATTCTCCGATTTGGCTACGCAACAATATTTACAAAGCCAAAACCG TGCATATGAAATTAAATATTTTAATAGCCTTCCTGAAACCTTTGCTGCGATCGGTAACGATTGTGAAATGGGGGTCTTGC CAATAGAGAACCTGTCCGAGGGATATGTCCAAGTCGTATTAGACCATCTTTTTGATACGAACTTAGTGGTCATTTCTGAA ATTTTATTACCGATTCGATTTTCTTTTGTCGCGTCCTGTGCAAACTTGTCAGAGTTGACGGATCTTTATGTGCAGTTTGT TGCGCATGGTCAGTGTTCTGAATTTATTGATAAGTTAGGTAATATCAAAGTGCATAATACCCAAAGTAATATTGAGTCTT TACTCCTTGCACAAAAGCATGGTGACGGGGCCGGTGCCATTATCCCCCAACATGCTTTAAATATGGCTAAAAATCAGACG CTTATTAGGGGAAATGTCACCAATTATAAGAATAATCAAACTCGGTTTCTGGTATTAACCGATAAACCACAACCGCGCCT GGCTGAGCAACAGTATAAAACAACGTTAGTAGTTAAAAATGAAAAAGATTCTCCCGGTGTTTTGGGCAATATTGTGGCTG CGTTTGCGGAACAAAAAGTGAATCTCACTTCAATTATGTCACGGCCAACCAAATCAGAATTTGGTAAATACCACTTCTTT ATTGATATTGATGGGCACCAGGAAGATCCTGATGTGGATCGGGCACTGCAACAAATAATGAGACAGCACCCGGTTACTAT TCTTGGCTCCTATATCAAAGCATCAAAATAA
Upstream 100 bases:
>100_bases AGTATCATGCTTACCTTTTTTGTTGGTTTTTTTTATAGTCGCTACCTTAACAAAAGCGCTAAAAGATCTCTTTGTCAGTG TAATTACTACCCGGTGCCCC
Downstream 100 bases:
>100_bases AAAGTGAAGTAGGATACAGGCAGCTGTTTCGCTTATCGTTTAACCAAATAAACACCCGCTTCGCTGTGGTAGGTATAAGG GAATTGGTCAAATAAAGCAA
Product: prephenate dehydratase
Products: NA
Alternate protein names: PDT; MjPDT [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MPKIATLGPKETFSDLATQQYLQSQNRAYEIKYFNSLPETFAAIGNDCEMGVLPIENLSEGYVQVVLDHLFDTNLVVISE ILLPIRFSFVASCANLSELTDLYVQFVAHGQCSEFIDKLGNIKVHNTQSNIESLLLAQKHGDGAGAIIPQHALNMAKNQT LIRGNVTNYKNNQTRFLVLTDKPQPRLAEQQYKTTLVVKNEKDSPGVLGNIVAAFAEQKVNLTSIMSRPTKSEFGKYHFF IDIDGHQEDPDVDRALQQIMRQHPVTILGSYIKASK
Sequences:
>Translated_276_residues MPKIATLGPKETFSDLATQQYLQSQNRAYEIKYFNSLPETFAAIGNDCEMGVLPIENLSEGYVQVVLDHLFDTNLVVISE ILLPIRFSFVASCANLSELTDLYVQFVAHGQCSEFIDKLGNIKVHNTQSNIESLLLAQKHGDGAGAIIPQHALNMAKNQT LIRGNVTNYKNNQTRFLVLTDKPQPRLAEQQYKTTLVVKNEKDSPGVLGNIVAAFAEQKVNLTSIMSRPTKSEFGKYHFF IDIDGHQEDPDVDRALQQIMRQHPVTILGSYIKASK >Mature_275_residues PKIATLGPKETFSDLATQQYLQSQNRAYEIKYFNSLPETFAAIGNDCEMGVLPIENLSEGYVQVVLDHLFDTNLVVISEI LLPIRFSFVASCANLSELTDLYVQFVAHGQCSEFIDKLGNIKVHNTQSNIESLLLAQKHGDGAGAIIPQHALNMAKNQTL IRGNVTNYKNNQTRFLVLTDKPQPRLAEQQYKTTLVVKNEKDSPGVLGNIVAAFAEQKVNLTSIMSRPTKSEFGKYHFFI DIDGHQEDPDVDRALQQIMRQHPVTILGSYIKASK
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=277, Percent_Identity=28.5198555956679, Blast_Score=88, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01842 ACT; PF00800 PDT [H]
EC number: =4.2.1.51 [H]
Molecular weight: Translated: 30841; Mature: 30709
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKIATLGPKETFSDLATQQYLQSQNRAYEIKYFNSLPETFAAIGNDCEMGVLPIENLSE CCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHCCHHHHHHCCCCCCCCCEECCHHHH GYVQVVLDHLFDTNLVVISEILLPIRFSFVASCANLSELTDLYVQFVAHGQCSEFIDKLG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC NIKVHNTQSNIESLLLAQKHGDGAGAIIPQHALNMAKNQTLIRGNVTNYKNNQTRFLVLT CEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEE DKPQPRLAEQQYKTTLVVKNEKDSPGVLGNIVAAFAEQKVNLTSIMSRPTKSEFGKYHFF CCCCCCHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHCCCEEEE IDIDGHQEDPDVDRALQQIMRQHPVTILGSYIKASK EEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure PKIATLGPKETFSDLATQQYLQSQNRAYEIKYFNSLPETFAAIGNDCEMGVLPIENLSE CCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHCCHHHHHHCCCCCCCCCEECCHHHH GYVQVVLDHLFDTNLVVISEILLPIRFSFVASCANLSELTDLYVQFVAHGQCSEFIDKLG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC NIKVHNTQSNIESLLLAQKHGDGAGAIIPQHALNMAKNQTLIRGNVTNYKNNQTRFLVLT CEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEE DKPQPRLAEQQYKTTLVVKNEKDSPGVLGNIVAAFAEQKVNLTSIMSRPTKSEFGKYHFF CCCCCCHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHCCCEEEE IDIDGHQEDPDVDRALQQIMRQHPVTILGSYIKASK EEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]