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The map label for this gene is ynfA [C]

Identifier: 119944360

GI number: 119944360

Start: 768041

End: 768373

Strand: Direct

Name: ynfA [C]

Synonym: Ping_0587

Alternate gene names: 119944360

Gene position: 768041-768373 (Clockwise)

Preceding gene: 119944359

Following gene: 119944362

Centisome position: 16.84

GC content: 44.74

Gene sequence:

>333_bases
ATGGAAGCGCTTAAAATTTTTGGTATTTTCACTGTTACTGCTGTCGCAGAAATTGTCGGCTGCTACCTCCCCTATCTTTG
GTTGCGGCAAGGCCATTCAATTTGGTTACTGGTACCTGCTGCATTTAGCCTTGCAGCCTTTGTCTGGTTGCTTACATTAC
ATCCTGAAGCCGCGGGCCGTACTTACGCTGCATACGGCGGTATTTATGTTTCTGTCGCTTTAATGTGGTTGTGGCTGGTC
GAATCAACACGTCCAACCATGACAGATCTGCTGGGTGTATTAATTTGTATTATTGGTATGGCTGTCATTATGTTTGGTCC
AAGGAATGTTTAA

Upstream 100 bases:

>100_bases
AATAAAAAGTCAATAAACGTCAGGTAGTGGGTATCATTACAGTTATTTCTGGCATGATTGCAACTGGCTTTTAAAAGCAC
TTAAGCACACAAGGAAAGTT

Downstream 100 bases:

>100_bases
CAAATAAGTTACTTAACGGCTTGGGTGTTTTTTGACGGGGTTTAAAATAAATCGCTTATATTTGTCAACCTTTGAGCGTC
GAGCCTTTTTTATGCGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MEALKIFGIFTVTAVAEIVGCYLPYLWLRQGHSIWLLVPAAFSLAAFVWLLTLHPEAAGRTYAAYGGIYVSVALMWLWLV
ESTRPTMTDLLGVLICIIGMAVIMFGPRNV

Sequences:

>Translated_110_residues
MEALKIFGIFTVTAVAEIVGCYLPYLWLRQGHSIWLLVPAAFSLAAFVWLLTLHPEAAGRTYAAYGGIYVSVALMWLWLV
ESTRPTMTDLLGVLICIIGMAVIMFGPRNV
>Mature_110_residues
MEALKIFGIFTVTAVAEIVGCYLPYLWLRQGHSIWLLVPAAFSLAAFVWLLTLHPEAAGRTYAAYGGIYVSVALMWLWLV
ESTRPTMTDLLGVLICIIGMAVIMFGPRNV

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=98, Percent_Identity=58.1632653061224, Blast_Score=117, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y587_PSYIN (A1SSH6)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_942040.1
- STRING:   A1SSH6
- GeneID:   4624233
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_0587
- eggNOG:   COG1742
- HOGENOM:   HBG313568
- OMA:   TRWDVAG
- PhylomeDB:   A1SSH6
- BioCyc:   PING357804:PING_0587-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 12163; Mature: 12163

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x14aa4d88)-; HASH(0x1562425c)-; HASH(0x166826e8)-; HASH(0x168a5860)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALKIFGIFTVTAVAEIVGCYLPYLWLRQGHSIWLLVPAAFSLAAFVWLLTLHPEAAGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCC
TYAAYGGIYVSVALMWLWLVESTRPTMTDLLGVLICIIGMAVIMFGPRNV
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCH
>Mature Secondary Structure
MEALKIFGIFTVTAVAEIVGCYLPYLWLRQGHSIWLLVPAAFSLAAFVWLLTLHPEAAGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCC
TYAAYGGIYVSVALMWLWLVESTRPTMTDLLGVLICIIGMAVIMFGPRNV
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA