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The map label for this gene is yadH [H]

Identifier: 119944347

GI number: 119944347

Start: 754459

End: 755232

Strand: Direct

Name: yadH [H]

Synonym: Ping_0574

Alternate gene names: 119944347

Gene position: 754459-755232 (Clockwise)

Preceding gene: 119944346

Following gene: 119944348

Centisome position: 16.55

GC content: 39.66

Gene sequence:

>774_bases
ATGATGAATAGTAATTACCTCACAGCGTTAAAAAGTCTGTGCATAAAAGAAGTTAACCGTTTTTTACGGATTTGGGTACA
AACACTTATCCCTCCCGCCATCACGATGACCCTTTATTTTGTTATTTTTGGCAATTTAATCGGCAAACGTATTGGTGAAA
TGAGTGGTTTCAGTTATATGTCATTTATTGTCCCCGGTATTATTATGATGGCGGTGATTACCAACTCCTACTCAAACGTG
GCATCTTCCTTTTTCAGTGCCAAGTTCCAGCGTAATGTTGAAGAGTTATTGGTCGCGCCTGTTCCTAATTATATTATTAT
TTGGGGCTACGTCGGGGGGGGAGTGATCCGCGGTTTACTGGTCGGGTTTATAGTGACTTGTGTTTCTCTGTTTTTTGTTG
AGTTACAGATTTTTAATATATTCGCCTTATTATTAAGTGTTTTATGTACCTCAATCCTGTTTTCACTGGCGGGTTTGTTA
AATGCGATATTTGCCCGTACTTTTGATGATATTAGTATTATTCCTACCTTTGTATTAACGCCGTTAACCTATCTGGGTGG
GGTCTTTTATTCAATTGATCTGCTCCCTGATTTTTGGCAAACCGTGTCGCACTTTAACCCCGTATTTTATATGATCAATG
CCTTCCGTTATGGTTTTCTGGGTATTGCAGATGTGTCATTGCTTTGGTCCTTTTCAATGATAGGCAGCTTTATTGTTCTG
CTTTATGGGTTGATCACTCTGCTACTCCGAAAAGGTGTGGGTATCCGCTCATGA

Upstream 100 bases:

>100_bases
GCAGAGTTAACCACTCAGGGCGTGCGAGTTCACAGTTTACGTAATAAATCCAATAGATTAGAAGAGTTGTTTGTAGGACT
TGTAGAAAAAGGCAATTTAA

Downstream 100 bases:

>100_bases
ATGAATCAGGTAATTCAAGAGTAATAAGCTCTAACCAATCTGGTTTACATGAACAATTAGATGAGGTGGTCTTAAAACAT
CTCAGCCATCAGTTTCGTAA

Product: ABC-2 type transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MMNSNYLTALKSLCIKEVNRFLRIWVQTLIPPAITMTLYFVIFGNLIGKRIGEMSGFSYMSFIVPGIIMMAVITNSYSNV
ASSFFSAKFQRNVEELLVAPVPNYIIIWGYVGGGVIRGLLVGFIVTCVSLFFVELQIFNIFALLLSVLCTSILFSLAGLL
NAIFARTFDDISIIPTFVLTPLTYLGGVFYSIDLLPDFWQTVSHFNPVFYMINAFRYGFLGIADVSLLWSFSMIGSFIVL
LYGLITLLLRKGVGIRS

Sequences:

>Translated_257_residues
MMNSNYLTALKSLCIKEVNRFLRIWVQTLIPPAITMTLYFVIFGNLIGKRIGEMSGFSYMSFIVPGIIMMAVITNSYSNV
ASSFFSAKFQRNVEELLVAPVPNYIIIWGYVGGGVIRGLLVGFIVTCVSLFFVELQIFNIFALLLSVLCTSILFSLAGLL
NAIFARTFDDISIIPTFVLTPLTYLGGVFYSIDLLPDFWQTVSHFNPVFYMINAFRYGFLGIADVSLLWSFSMIGSFIVL
LYGLITLLLRKGVGIRS
>Mature_257_residues
MMNSNYLTALKSLCIKEVNRFLRIWVQTLIPPAITMTLYFVIFGNLIGKRIGEMSGFSYMSFIVPGIIMMAVITNSYSNV
ASSFFSAKFQRNVEELLVAPVPNYIIIWGYVGGGVIRGLLVGFIVTCVSLFFVELQIFNIFALLLSVLCTSILFSLAGLL
NAIFARTFDDISIIPTFVLTPLTYLGGVFYSIDLLPDFWQTVSHFNPVFYMINAFRYGFLGIADVSLLWSFSMIGSFIVL
LYGLITLLLRKGVGIRS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=256, Percent_Identity=66.015625, Blast_Score=345, Evalue=1e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28748; Mature: 28748

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]