| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944329
Identifier: 119944329
GI number: 119944329
Start: 717103
End: 718965
Strand: Direct
Name: 119944329
Synonym: Ping_0556
Alternate gene names: NA
Gene position: 717103-718965 (Clockwise)
Preceding gene: 119944328
Following gene: 119944332
Centisome position: 15.73
GC content: 44.12
Gene sequence:
>1863_bases ATGAAAAAAAGTAGTTACAAAATATTTTTAATAGCATTCCTATCGATATTTATGTTTGCCTGTGGGGATGAACCCTTAAC AACATTATTAAATAATACGTCTTCTGCAGGTGATACCGGCACTCTACAACCGCAGGCCATCGTCAGCGATGCACCGCTGT CAAAATCAGGCGAGCAGATACTCGGTAATCCGGATTATCAGGCGATCTCCTACGGTGCCTTTAGAGCACCAACACGTGAA GAAGCAACGGTGCCCAGTGTTGCTGATCTTAAAGAAGATATGCTGCTACTGCAGGCGATGGATATAAAAGTATTAAGAAC TTATAACACTCAAATTTTTAGTGATACGGCAAATCTACTGGAAGCCATTGATCAGTTAATGGCTGCTGATCCTAACTTTG AAATGTACGTGATGCTGGGTGTTTGGGTACAAGCACAAGGCTCTTATACTGCTAATGTAGATAATACAACTGGAGATGCT GCGCTGAACCGAGCTGAAATGGATAAAGCAATAGAGATGGCACAGAATTATCCTGAGATTATTAAAGTGATTGCCGTGGG TAATGAAGCGATGGTGGACTGGCAGGCACATGATATTCCTGTCAGTGTTGTGCTTGGCTATGTAAACGAGTTACAAGGCT TAAAAGCTGACAGTACTATTTCTGCTGATATCTGGATCACAAGTTCAGATAATCAGGCCGTTTGGTCTGGTAGCGATCCG AGAGTATCTGGACAACTGAATGATTTAAATGCCTTGATTGCAGCGGTTGATTATATCTCACTGCATACTTACCCCTTCCA TGATACGCACCACATTCCCGATTTCTGGCAGGTTCCTGCGGATCAAGCTGGTTTAACGGATCAACAGAAAATTGATGCCG CGATGGTCAGAGCTCAAGCGCGTGTTGTTGAACAATATACGGCTGCACAAGCTTATATGTTAAAGTTAGGTATCAATAAA CCGATCCACATTGGCGAAACAGGCTGGGCAACAGTGGGTAGCCCGGGTGGTGAAGATTTTACTCAATCCGGCTCTGCAGC AGCGGACGAATACAAACAAAAAATGGCTTATGATGCACTGCGTACCTGGTCAAATGAGTTTGGTGCATCGCTGTTCTTTT TTGAAGCTTTTGATGAGCAGTGGAAAGCGGGCACAGAAAACCCTGCAACTCACCCTGAAAAACATTTTGGCTTAATTAAT ATGCAGGGCGAAGCGAAATACCTGCTTTGGGATCTGGTTGATGCCGGAGCATTTAATGGCCTGGAAAGGGATGGTTTACA AATTACTAAAACTTACGGTGGTAATGTAGCGGCTATGATGGATGAGGTCTTTGTGCCGCCTGCAGCGCCGGTAACTAACG AACCTGTAGCGGGTGAGTTCATTGTCCTAGGCATTTCATTATATTCAAATGCGCTTGCTTACGGTTGGGATTCTCCAGAG ACCGCCTGGGCTGGTGTTAATGATGATACGGGTGTCTTAACGGTAGCAACAGATCCTGATACTGCAGCAACTTGGGGCTG GGGAGCAGGTGTTGGAATTCCAAATGAGACCAGTAATCTAAGCACTTCTACACAGATTACCTTTGAAATTAAAGGTGATG CCGCTTTTGGCTTTTACCTTGGCTTCCAAACGACCAAAGGCGCAGGAACAAATCACTGGGTTAGATTTAATACTGGCAGC TATACACTCACTGACCAGTGGGCTAAATATACCATTAGTCTTAGTGACTTTTCGGACTTTGCAAGTGGCAATTTAGAGGT TGTCAATTCACCCTTTACTATTGCTGATATTTACGAAACGTCGGGAGGCAGTGCGCCTACCTTAAGTACGATTGAGGTGA AAAATATTTCCTGGTTAGAATAA
Upstream 100 bases:
>100_bases AAGATCGCGCAAAATTTAAAAGGCGTCTGCAGACTGATTTTTAACAACATAATAAATATAACGTTTTATGGTTAATAGAT TTTTTGAAAAGGGCAATAAA
Downstream 100 bases:
>100_bases AATCAGATAACTAACTTAAATATTAGAACCGCCCCAAAGTGTGAAGTAACCCCGAAAAGCGAGTCTCTTAATAAGACGGT CTTGAATTTAATAATGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosyl Hydrolase; Glycosyl Hydrolases Family; Glucan Endo-1 3-Beta-D-Glucosidase
Number of amino acids: Translated: 620; Mature: 620
Protein sequence:
>620_residues MKKSSYKIFLIAFLSIFMFACGDEPLTTLLNNTSSAGDTGTLQPQAIVSDAPLSKSGEQILGNPDYQAISYGAFRAPTRE EATVPSVADLKEDMLLLQAMDIKVLRTYNTQIFSDTANLLEAIDQLMAADPNFEMYVMLGVWVQAQGSYTANVDNTTGDA ALNRAEMDKAIEMAQNYPEIIKVIAVGNEAMVDWQAHDIPVSVVLGYVNELQGLKADSTISADIWITSSDNQAVWSGSDP RVSGQLNDLNALIAAVDYISLHTYPFHDTHHIPDFWQVPADQAGLTDQQKIDAAMVRAQARVVEQYTAAQAYMLKLGINK PIHIGETGWATVGSPGGEDFTQSGSAAADEYKQKMAYDALRTWSNEFGASLFFFEAFDEQWKAGTENPATHPEKHFGLIN MQGEAKYLLWDLVDAGAFNGLERDGLQITKTYGGNVAAMMDEVFVPPAAPVTNEPVAGEFIVLGISLYSNALAYGWDSPE TAWAGVNDDTGVLTVATDPDTAATWGWGAGVGIPNETSNLSTSTQITFEIKGDAAFGFYLGFQTTKGAGTNHWVRFNTGS YTLTDQWAKYTISLSDFSDFASGNLEVVNSPFTIADIYETSGGSAPTLSTIEVKNISWLE
Sequences:
>Translated_620_residues MKKSSYKIFLIAFLSIFMFACGDEPLTTLLNNTSSAGDTGTLQPQAIVSDAPLSKSGEQILGNPDYQAISYGAFRAPTRE EATVPSVADLKEDMLLLQAMDIKVLRTYNTQIFSDTANLLEAIDQLMAADPNFEMYVMLGVWVQAQGSYTANVDNTTGDA ALNRAEMDKAIEMAQNYPEIIKVIAVGNEAMVDWQAHDIPVSVVLGYVNELQGLKADSTISADIWITSSDNQAVWSGSDP RVSGQLNDLNALIAAVDYISLHTYPFHDTHHIPDFWQVPADQAGLTDQQKIDAAMVRAQARVVEQYTAAQAYMLKLGINK PIHIGETGWATVGSPGGEDFTQSGSAAADEYKQKMAYDALRTWSNEFGASLFFFEAFDEQWKAGTENPATHPEKHFGLIN MQGEAKYLLWDLVDAGAFNGLERDGLQITKTYGGNVAAMMDEVFVPPAAPVTNEPVAGEFIVLGISLYSNALAYGWDSPE TAWAGVNDDTGVLTVATDPDTAATWGWGAGVGIPNETSNLSTSTQITFEIKGDAAFGFYLGFQTTKGAGTNHWVRFNTGS YTLTDQWAKYTISLSDFSDFASGNLEVVNSPFTIADIYETSGGSAPTLSTIEVKNISWLE >Mature_620_residues MKKSSYKIFLIAFLSIFMFACGDEPLTTLLNNTSSAGDTGTLQPQAIVSDAPLSKSGEQILGNPDYQAISYGAFRAPTRE EATVPSVADLKEDMLLLQAMDIKVLRTYNTQIFSDTANLLEAIDQLMAADPNFEMYVMLGVWVQAQGSYTANVDNTTGDA ALNRAEMDKAIEMAQNYPEIIKVIAVGNEAMVDWQAHDIPVSVVLGYVNELQGLKADSTISADIWITSSDNQAVWSGSDP RVSGQLNDLNALIAAVDYISLHTYPFHDTHHIPDFWQVPADQAGLTDQQKIDAAMVRAQARVVEQYTAAQAYMLKLGINK PIHIGETGWATVGSPGGEDFTQSGSAAADEYKQKMAYDALRTWSNEFGASLFFFEAFDEQWKAGTENPATHPEKHFGLIN MQGEAKYLLWDLVDAGAFNGLERDGLQITKTYGGNVAAMMDEVFVPPAAPVTNEPVAGEFIVLGISLYSNALAYGWDSPE TAWAGVNDDTGVLTVATDPDTAATWGWGAGVGIPNETSNLSTSTQITFEIKGDAAFGFYLGFQTTKGAGTNHWVRFNTGS YTLTDQWAKYTISLSDFSDFASGNLEVVNSPFTIADIYETSGGSAPTLSTIEVKNISWLE
Specific function: Unknown
COG id: COG5309
COG function: function code G; Exo-beta-1,3-glucanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67237; Mature: 67237
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSSYKIFLIAFLSIFMFACGDEPLTTLLNNTSSAGDTGTLQPQAIVSDAPLSKSGEQI CCCCCEEEHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHEECCCCCCCCCCHH LGNPDYQAISYGAFRAPTREEATVPSVADLKEDMLLLQAMDIKVLRTYNTQIFSDTANLL CCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHH EAIDQLMAADPNFEMYVMLGVWVQAQGSYTANVDNTTGDAALNRAEMDKAIEMAQNYPEI HHHHHHHHCCCCCEEEEEEEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHH IKVIAVGNEAMVDWQAHDIPVSVVLGYVNELQGLKADSTISADIWITSSDNQAVWSGSDP EEEEEECCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEECCCCC RVSGQLNDLNALIAAVDYISLHTYPFHDTHHIPDFWQVPADQAGLTDQQKIDAAMVRAQA EECCCHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHH RVVEQYTAAQAYMLKLGINKPIHIGETGWATVGSPGGEDFTQSGSAAADEYKQKMAYDAL HHHHHHHHHHEEEEEECCCCCEEECCCCCEECCCCCCCCHHCCCCHHHHHHHHHHHHHHH RTWSNEFGASLFFFEAFDEQWKAGTENPATHPEKHFGLINMQGEAKYLLWDLVDAGAFNG HHHHHHHCCEEEEEEHHHHHHCCCCCCCCCCCHHHCEEEEECCCCEEEEEEEHHCCCCCC LERDGLQITKTYGGNVAAMMDEVFVPPAAPVTNEPVAGEFIVLGISLYSNALAYGWDSPE CCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHCHHEECCCCCC TAWAGVNDDTGVLTVATDPDTAATWGWGAGVGIPNETSNLSTSTQITFEIKGDAAFGFYL CEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEE GFQTTKGAGTNHWVRFNTGSYTLTDQWAKYTISLSDFSDFASGNLEVVNSPFTIADIYET EEEECCCCCCCCEEEEECCCEEEECCCEEEEEEECCCHHHCCCCEEEEECCEEEEEEEEC SGGSAPTLSTIEVKNISWLE CCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MKKSSYKIFLIAFLSIFMFACGDEPLTTLLNNTSSAGDTGTLQPQAIVSDAPLSKSGEQI CCCCCEEEHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHEECCCCCCCCCCHH LGNPDYQAISYGAFRAPTREEATVPSVADLKEDMLLLQAMDIKVLRTYNTQIFSDTANLL CCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHH EAIDQLMAADPNFEMYVMLGVWVQAQGSYTANVDNTTGDAALNRAEMDKAIEMAQNYPEI HHHHHHHHCCCCCEEEEEEEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHH IKVIAVGNEAMVDWQAHDIPVSVVLGYVNELQGLKADSTISADIWITSSDNQAVWSGSDP EEEEEECCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEECCCCC RVSGQLNDLNALIAAVDYISLHTYPFHDTHHIPDFWQVPADQAGLTDQQKIDAAMVRAQA EECCCHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHH RVVEQYTAAQAYMLKLGINKPIHIGETGWATVGSPGGEDFTQSGSAAADEYKQKMAYDAL HHHHHHHHHHEEEEEECCCCCEEECCCCCEECCCCCCCCHHCCCCHHHHHHHHHHHHHHH RTWSNEFGASLFFFEAFDEQWKAGTENPATHPEKHFGLINMQGEAKYLLWDLVDAGAFNG HHHHHHHCCEEEEEEHHHHHHCCCCCCCCCCCHHHCEEEEECCCCEEEEEEEHHCCCCCC LERDGLQITKTYGGNVAAMMDEVFVPPAAPVTNEPVAGEFIVLGISLYSNALAYGWDSPE CCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHCHHEECCCCCC TAWAGVNDDTGVLTVATDPDTAATWGWGAGVGIPNETSNLSTSTQITFEIKGDAAFGFYL CEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEE GFQTTKGAGTNHWVRFNTGSYTLTDQWAKYTISLSDFSDFASGNLEVVNSPFTIADIYET EEEECCCCCCCCEEEEECCCEEEECCCEEEEEEECCCHHHCCCCEEEEECCEEEEEEEEC SGGSAPTLSTIEVKNISWLE CCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA