| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is tatA
Identifier: 119944105
GI number: 119944105
Start: 419759
End: 420025
Strand: Reverse
Name: tatA
Synonym: Ping_0320
Alternate gene names: 119944105
Gene position: 420025-419759 (Counterclockwise)
Preceding gene: 119944106
Following gene: 119944104
Centisome position: 9.21
GC content: 40.45
Gene sequence:
>267_bases ATGGGCGGCATTGGTATTTGGCAGTTAGCTATTATCACAGTAATAGTGATCTTACTCTTCGGGACAAAGAAATTACGCGG CATTGGCGGTGATTTAGGCGGTGCTATCAAAGGATTTAAAAAAGCAATCAAGGAAGATAACGACAAAGACTCTACGCAGG TAGACGATAAAGATTCTACGCAAGTAGATGATAACGCGAAGCAACCCTCGAATAAAAAAGTAGAGGAAAACATCAAAGAG CAGAGTAAAGAAAAAGATCGGGCATAA
Upstream 100 bases:
>100_bases TTTTGCCTGGTTACTTGCGTGGCGCTATACCAATAAGGTATAAAGTTTACTATTAATAATGACAAACAATTAACTGAACG ATTAAAGAAGGAAATAAATT
Downstream 100 bases:
>100_bases TCATTAACTCAAGGTGTACTTTAGATGTTTGATATAGGTTTTTGGGAACTTGTTTTAATTTCTGTGATCGGTTTGGTTGT TCTTGGCCCAGAGCGTCTAC
Product: twin arginine-targeting protein translocase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MGGIGIWQLAIITVIVILLFGTKKLRGIGGDLGGAIKGFKKAIKEDNDKDSTQVDDKDSTQVDDNAKQPSNKKVEENIKE QSKEKDRA
Sequences:
>Translated_88_residues MGGIGIWQLAIITVIVILLFGTKKLRGIGGDLGGAIKGFKKAIKEDNDKDSTQVDDKDSTQVDDNAKQPSNKKVEENIKE QSKEKDRA >Mature_87_residues GGIGIWQLAIITVIVILLFGTKKLRGIGGDLGGAIKGFKKAIKEDNDKDSTQVDDKDSTQVDDNAKQPSNKKVEENIKEQ SKEKDRA
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
Organism=Escherichia coli, GI87082337, Length=86, Percent_Identity=54.6511627906977, Blast_Score=81, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_PSYIN (A1SRS1)
Other databases:
- EMBL: CP000510 - RefSeq: YP_941785.1 - STRING: A1SRS1 - GeneID: 4624898 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0320 - eggNOG: NOG84601 - HOGENOM: HBG751935 - BioCyc: PING357804:PING_0320-MONOMER - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 9599; Mature: 9468
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x155cca34)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGIGIWQLAIITVIVILLFGTKKLRGIGGDLGGAIKGFKKAIKEDNDKDSTQVDDKDST CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC QVDDNAKQPSNKKVEENIKEQSKEKDRA CCCCCCCCCCCCCHHHHHHHHHHHCCCH >Mature Secondary Structure GGIGIWQLAIITVIVILLFGTKKLRGIGGDLGGAIKGFKKAIKEDNDKDSTQVDDKDST CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC QVDDNAKQPSNKKVEENIKEQSKEKDRA CCCCCCCCCCCCCHHHHHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA