| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944094
Identifier: 119944094
GI number: 119944094
Start: 407773
End: 407985
Strand: Reverse
Name: 119944094
Synonym: Ping_0309
Alternate gene names: NA
Gene position: 407985-407773 (Counterclockwise)
Preceding gene: 119944095
Following gene: 119944093
Centisome position: 8.95
GC content: 37.56
Gene sequence:
>213_bases ATGAAAAAGACAATGAGTTTTGCAGTATTACATTTCACAGTAGCTTTTACAGTTACTTACTTATTAACCGGTAGCATAGT GATTGGCGGGACGGTTGCCTTAGTTGAGCCTGCGGTGAATACCGTTGTTTTCTACTTTCATGAAAAAGTATGGAAAAAAA TTGAGGCAAGAAAGGTGGAAAAGAAAATGACCAGTGTCCATTCTGTCTGTTAA
Upstream 100 bases:
>100_bases TGTTGTAAAAAGGAAAAACTTATTTTGCTGTCATTGACAACTTAAATGATAACAGTTATCATTTAAGTTGTGTTTTTAAT AATAACTAAGAGGCTTTAGT
Downstream 100 bases:
>100_bases TAATTTACGGATAGGAAGCGACACTCTTAGTTGTTAGGAAAGAAATTGATTAGGAAAAAAGATTGGCTGTCCAACTTTTG TAGTTTCGATAATTAACTGC
Product: membrane protein-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MKKTMSFAVLHFTVAFTVTYLLTGSIVIGGTVALVEPAVNTVVFYFHEKVWKKIEARKVEKKMTSVHSVC
Sequences:
>Translated_70_residues MKKTMSFAVLHFTVAFTVTYLLTGSIVIGGTVALVEPAVNTVVFYFHEKVWKKIEARKVEKKMTSVHSVC >Mature_70_residues MKKTMSFAVLHFTVAFTVTYLLTGSIVIGGTVALVEPAVNTVVFYFHEKVWKKIEARKVEKKMTSVHSVC
Specific function: Unknown
COG id: COG3205
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7848; Mature: 7848
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTMSFAVLHFTVAFTVTYLLTGSIVIGGTVALVEPAVNTVVFYFHEKVWKKIEARKVE CCCHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKMTSVHSVC HHHHHHHCCC >Mature Secondary Structure MKKTMSFAVLHFTVAFTVTYLLTGSIVIGGTVALVEPAVNTVVFYFHEKVWKKIEARKVE CCCHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKMTSVHSVC HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA