| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is artI [H]
Identifier: 119944081
GI number: 119944081
Start: 385109
End: 385891
Strand: Direct
Name: artI [H]
Synonym: Ping_0296
Alternate gene names: 119944081
Gene position: 385109-385891 (Clockwise)
Preceding gene: 119944078
Following gene: 119944082
Centisome position: 8.45
GC content: 34.74
Gene sequence:
>783_bases ATGAATTGGATATTAAACAACATGCTTATTTTGCGCTTTTTTCTTTCAATATTTCTATTGTTTTCGCCCCTTACTGTCTT ATCCTCGACAGCCGTTCCTAACGATAATATAAAAGTTCGTTTTGCGACCGATGCAAATTATTACCCTTTTGAATACTTAG ATGAACAGCAACAGATTCAAGGTTTTGATATTGATATGGCTAAAGCGATTTGTAAAGCCGTTAATTTAACCTGCAGTTTT CACCATCAACGTTTTGAGAGCCTGCTACTGTCATTATCTTTCGCTCGTTTTGATGCGGTTATTTCCGCTTTAGATATTAC CAGCGAACGTTTAAAAACAGTGGGTTTCACCAATAGTTATTATGAAAATACGCCCGTCTTTATCAGTAAAAAATCAGCTG AAGAACGTTTCTCAACGGTGGGCAAATTTATAGGTGTGCGTTCCAACTCATCCAACCAGGAATATTTAATTAAATATGAA AAAGAGAATAGTTTTATCATCTCTTATGTCACCTATTACGAAATTCTTTCGGATTTAAGTGCCGAAAAAATTGATGCGGC ATTTGTCGATCAAGCGGTCGCATCGGAATTTTTAAAACAAAAAGATAATCGCATTCATTTTGACGTTCAGAAAATTAATT CTTCCCAGAGGAAATTATTTTCGCAAGGCTATGGTATCGCGATTCAAAAAGGAAATGTCATCCTGCAAAACCGCTTGAAT TTGGGTCTTAAAATTATTACTGAAAATGGTACTTACCAAAAAATATATGAACGCTATTTTTAA
Upstream 100 bases:
>100_bases TTTAAAATAGACTGTCATTAAATGTTAAGATCGGTGTAGTATATATCATTTGCAATAAGTGTTTTAAACGTCTACAACGT GAATTTTTTGTTATTAATAA
Downstream 100 bases:
>100_bases ACCTGTCACTTCACATCACAAATTAATAAACAAATCACCAAAAAAAGTTGTTTGGGGCTCCAGTTTCAGCTATCAAGCAA CTCTTGCTGCTTTTCAAACT
Product: arginine ABC transporter solute-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MNWILNNMLILRFFLSIFLLFSPLTVLSSTAVPNDNIKVRFATDANYYPFEYLDEQQQIQGFDIDMAKAICKAVNLTCSF HHQRFESLLLSLSFARFDAVISALDITSERLKTVGFTNSYYENTPVFISKKSAEERFSTVGKFIGVRSNSSNQEYLIKYE KENSFIISYVTYYEILSDLSAEKIDAAFVDQAVASEFLKQKDNRIHFDVQKINSSQRKLFSQGYGIAIQKGNVILQNRLN LGLKIITENGTYQKIYERYF
Sequences:
>Translated_260_residues MNWILNNMLILRFFLSIFLLFSPLTVLSSTAVPNDNIKVRFATDANYYPFEYLDEQQQIQGFDIDMAKAICKAVNLTCSF HHQRFESLLLSLSFARFDAVISALDITSERLKTVGFTNSYYENTPVFISKKSAEERFSTVGKFIGVRSNSSNQEYLIKYE KENSFIISYVTYYEILSDLSAEKIDAAFVDQAVASEFLKQKDNRIHFDVQKINSSQRKLFSQGYGIAIQKGNVILQNRLN LGLKIITENGTYQKIYERYF >Mature_260_residues MNWILNNMLILRFFLSIFLLFSPLTVLSSTAVPNDNIKVRFATDANYYPFEYLDEQQQIQGFDIDMAKAICKAVNLTCSF HHQRFESLLLSLSFARFDAVISALDITSERLKTVGFTNSYYENTPVFISKKSAEERFSTVGKFIGVRSNSSNQEYLIKYE KENSFIISYVTYYEILSDLSAEKIDAAFVDQAVASEFLKQKDNRIHFDVQKINSSQRKLFSQGYGIAIQKGNVILQNRLN LGLKIITENGTYQKIYERYF
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787088, Length=239, Percent_Identity=38.0753138075314, Blast_Score=170, Evalue=8e-44, Organism=Escherichia coli, GI1787085, Length=224, Percent_Identity=40.1785714285714, Blast_Score=164, Evalue=4e-42, Organism=Escherichia coli, GI1788648, Length=227, Percent_Identity=33.0396475770925, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI1788649, Length=255, Percent_Identity=30.5882352941176, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1787031, Length=229, Percent_Identity=28.3842794759825, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788228, Length=224, Percent_Identity=25, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 30016; Mature: 30016
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWILNNMLILRFFLSIFLLFSPLTVLSSTAVPNDNIKVRFATDANYYPFEYLDEQQQIQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCHHHHC GFDIDMAKAICKAVNLTCSFHHQRFESLLLSLSFARFDAVISALDITSERLKTVGFTNSY CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC YENTPVFISKKSAEERFSTVGKFIGVRSNSSNQEYLIKYEKENSFIISYVTYYEILSDLS CCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHCC AEKIDAAFVDQAVASEFLKQKDNRIHFDVQKINSSQRKLFSQGYGIAIQKGNVILQNRLN HHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCHHHHHHHCCCCEEEECCCEEEEECCC LGLKIITENGTYQKIYERYF CCEEEEECCCCHHHHHHHCC >Mature Secondary Structure MNWILNNMLILRFFLSIFLLFSPLTVLSSTAVPNDNIKVRFATDANYYPFEYLDEQQQIQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCHHHHC GFDIDMAKAICKAVNLTCSFHHQRFESLLLSLSFARFDAVISALDITSERLKTVGFTNSY CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC YENTPVFISKKSAEERFSTVGKFIGVRSNSSNQEYLIKYEKENSFIISYVTYYEILSDLS CCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHCC AEKIDAAFVDQAVASEFLKQKDNRIHFDVQKINSSQRKLFSQGYGIAIQKGNVILQNRLN HHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCHHHHHHHCCCCEEEECCCEEEEECCC LGLKIITENGTYQKIYERYF CCEEEEECCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]