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The map label for this gene is ppdD [C]

Identifier: 119944079

GI number: 119944079

Start: 383806

End: 384207

Strand: Reverse

Name: ppdD [C]

Synonym: Ping_0294

Alternate gene names: 119944079

Gene position: 384207-383806 (Counterclockwise)

Preceding gene: 119944080

Following gene: 119944073

Centisome position: 8.43

GC content: 39.8

Gene sequence:

>402_bases
ATGAAAAAAGCTCAAGGATTTACATTAGTTGAACTATTAGTTGTGATAGCGATTATCGGCATATTAGCAGGTATTGCTTA
TCCCACCTATAAATCCTATACGCTTCACGCAAATCGCAGTGATGCCAAAAATGAGTTGCAAAAAGCACAGTTAGTACAGA
GTAGTTGGCATATTTTAAATCCAGACTATTCAATGGTCTCAGCCGATGTCGGACTACCGGATAATCATAACTATTATACT
TTTACTATCATCTCAGCAGGAAGTACAACTTATGCAATGAAAGCGGTTGCTAAAGCGGGGACAATGCAGGCAAATGATAA
GGCTGAATGCACCACCTTAGTGATCAACCAGGACAATGCACATTATGACGCATCGGATACAAACAATGATCAGTGCTGGT
GA

Upstream 100 bases:

>100_bases
ACACTTCACATATTATCCCTTAAGCTTGAAGGACTCCTGTCGCTTTGTTGATAGCATCCTACACTTACCTGCACAGGGAA
TTATACAGCGAGGTGATTTT

Downstream 100 bases:

>100_bases
TCATGAAAGGCTTGGATAATATTAAGCCTTTCTGATCCTGTAAAAATAACCTCTGAGCTAATAACGCGTATTAAGTTCTG
TTTTATTAAAAAATTCTCGC

Product: pilus assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKKAQGFTLVELLVVIAIIGILAGIAYPTYKSYTLHANRSDAKNELQKAQLVQSSWHILNPDYSMVSADVGLPDNHNYYT
FTIISAGSTTYAMKAVAKAGTMQANDKAECTTLVINQDNAHYDASDTNNDQCW

Sequences:

>Translated_133_residues
MKKAQGFTLVELLVVIAIIGILAGIAYPTYKSYTLHANRSDAKNELQKAQLVQSSWHILNPDYSMVSADVGLPDNHNYYT
FTIISAGSTTYAMKAVAKAGTMQANDKAECTTLVINQDNAHYDASDTNNDQCW
>Mature_133_residues
MKKAQGFTLVELLVVIAIIGILAGIAYPTYKSYTLHANRSDAKNELQKAQLVQSSWHILNPDYSMVSADVGLPDNHNYYT
FTIISAGSTTYAMKAVAKAGTMQANDKAECTTLVINQDNAHYDASDTNNDQCW

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14594; Mature: 14594

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAQGFTLVELLVVIAIIGILAGIAYPTYKSYTLHANRSDAKNELQKAQLVQSSWHILN
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEC
PDYSMVSADVGLPDNHNYYTFTIISAGSTTYAMKAVAKAGTMQANDKAECTTLVINQDNA
CCCCEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCC
HYDASDTNNDQCW
EECCCCCCCCCCC
>Mature Secondary Structure
MKKAQGFTLVELLVVIAIIGILAGIAYPTYKSYTLHANRSDAKNELQKAQLVQSSWHILN
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEC
PDYSMVSADVGLPDNHNYYTFTIISAGSTTYAMKAVAKAGTMQANDKAECTTLVINQDNA
CCCCEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCC
HYDASDTNNDQCW
EECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA