| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944022
Identifier: 119944022
GI number: 119944022
Start: 304922
End: 305641
Strand: Reverse
Name: 119944022
Synonym: Ping_0236
Alternate gene names: NA
Gene position: 305641-304922 (Counterclockwise)
Preceding gene: 119944023
Following gene: 119944021
Centisome position: 6.7
GC content: 40.0
Gene sequence:
>720_bases GTGCAATCAAAAGTGGTATGGCTGATTGGTCGAGGTGCATCGATCGCTTGCGGTCTAGATTGGGATCTTAGTAACTCCGA AGGAAAGCTCAATAGAGAATCTCAAATATCGATAATTAAAGAAAAGTTACCGCAGGCTATGAAAAAAGTTAACTCTGAGC CCTATAGTAAGTTGGTTCGTATTTTAGAGAAGCGTACTACTAGCAAATATTTCCATCGTTTTGTAACTACAAACTGGGAT TGCCTACTGCAAAATGAATTGTCGAGTTTGTGTGAGTCTAAAGCAGCTGTGCCTGATGCATTTGGTATGAATTCACATGT TTATCACTTGAATGGCACAGTCGAAGATACACCTGAAGATTTAAGATCAAAGATATTACTTGAATCTGACGAGCCTGAGC TAAGGGAGATGTGGTTTGAGAGTAACGAAGCTTTTAATATTATTTTAGAATCTAGTATTTTCGTGGTCGTCGGAATGTCC TTTGAGTGTGTAATCGATAGGTATACCTTAGTAGCATTAGGTCGTTGCGGATCAGAAATGCCAGTAGCAAGTTCAAATTG GCTACTGGTTAATCCAAACAGAGAGCAAGCTGAAAAAGTTTCCAGTGAGATTAGTCGGCATCTTCCAGATGCAAAATTCA AGTTTGTTAACGAGGGCTTCAATGAATGGATTAATCGCGGCGCTAGGGAACTATGTGATATCGGAGTCCTAAGTGCCTAA
Upstream 100 bases:
>100_bases TTAAACGGAACTAAAACCGTTGGCTCAGTTTCGCTTCGCTCCACATTTTAGCCCACAATTTTTTGCAAGTTAACAAGGGC TTAGGAAAAAGGGAGAGCAC
Downstream 100 bases:
>100_bases CAAGTGCATCAACCATCGCCAGTAAGCTGGCTGGACACCCTACGAGCGCCGTTTATGTAGGCGTTAGACCCAATGGGATT CAATATGTTTTCGAAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MQSKVVWLIGRGASIACGLDWDLSNSEGKLNRESQISIIKEKLPQAMKKVNSEPYSKLVRILEKRTTSKYFHRFVTTNWD CLLQNELSSLCESKAAVPDAFGMNSHVYHLNGTVEDTPEDLRSKILLESDEPELREMWFESNEAFNIILESSIFVVVGMS FECVIDRYTLVALGRCGSEMPVASSNWLLVNPNREQAEKVSSEISRHLPDAKFKFVNEGFNEWINRGARELCDIGVLSA
Sequences:
>Translated_239_residues MQSKVVWLIGRGASIACGLDWDLSNSEGKLNRESQISIIKEKLPQAMKKVNSEPYSKLVRILEKRTTSKYFHRFVTTNWD CLLQNELSSLCESKAAVPDAFGMNSHVYHLNGTVEDTPEDLRSKILLESDEPELREMWFESNEAFNIILESSIFVVVGMS FECVIDRYTLVALGRCGSEMPVASSNWLLVNPNREQAEKVSSEISRHLPDAKFKFVNEGFNEWINRGARELCDIGVLSA >Mature_239_residues MQSKVVWLIGRGASIACGLDWDLSNSEGKLNRESQISIIKEKLPQAMKKVNSEPYSKLVRILEKRTTSKYFHRFVTTNWD CLLQNELSSLCESKAAVPDAFGMNSHVYHLNGTVEDTPEDLRSKILLESDEPELREMWFESNEAFNIILESSIFVVVGMS FECVIDRYTLVALGRCGSEMPVASSNWLLVNPNREQAEKVSSEISRHLPDAKFKFVNEGFNEWINRGARELCDIGVLSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27083; Mature: 27083
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSKVVWLIGRGASIACGLDWDLSNSEGKLNRESQISIIKEKLPQAMKKVNSEPYSKLVR CCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH ILEKRTTSKYFHRFVTTNWDCLLQNELSSLCESKAAVPDAFGMNSHVYHLNGTVEDTPED HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHH LRSKILLESDEPELREMWFESNEAFNIILESSIFVVVGMSFECVIDRYTLVALGRCGSEM HHHHEECCCCCHHHHHHHHCCCCEEEEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCC PVASSNWLLVNPNREQAEKVSSEISRHLPDAKFKFVNEGFNEWINRGARELCDIGVLSA CCCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQSKVVWLIGRGASIACGLDWDLSNSEGKLNRESQISIIKEKLPQAMKKVNSEPYSKLVR CCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH ILEKRTTSKYFHRFVTTNWDCLLQNELSSLCESKAAVPDAFGMNSHVYHLNGTVEDTPED HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHH LRSKILLESDEPELREMWFESNEAFNIILESSIFVVVGMSFECVIDRYTLVALGRCGSEM HHHHEECCCCCHHHHHHHHCCCCEEEEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCC PVASSNWLLVNPNREQAEKVSSEISRHLPDAKFKFVNEGFNEWINRGARELCDIGVLSA CCCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA