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The map label for this gene is yrdA [H]

Identifier: 119944019

GI number: 119944019

Start: 295533

End: 296072

Strand: Reverse

Name: yrdA [H]

Synonym: Ping_0233

Alternate gene names: 119944019

Gene position: 296072-295533 (Counterclockwise)

Preceding gene: 119944021

Following gene: 119944013

Centisome position: 6.49

GC content: 41.11

Gene sequence:

>540_bases
ATGCTTCCTGTATTACGCGGTTACAAAAATTCTTTTCCTGTTCTTGGCGATTCTGTTTATATTGATCCTTTTTCTTCTAT
TATTGGCGATGTCACTTTAGGTGATGATGTCAATATTTGGCCAATGTGCGTTGTAAGGGGAGATGTTAACTTTATAACGA
TAGGTAAACGCAGCAATATTCAGGATGGATCGATATTACATGTCGCCCGCGCAGGTGAAGCAAGCATTGATGGATATCCT
TTAATCATTGGGGACGATGTCACCGTCGGTCACAAAGCTATGTTACATGCCTGCAGGATTGGTAATCGGGTTTTAATTGG
TATGGGCGCTATAGTATTAGATAATGCACAAATTGATGATGATGTTATTTTAGCCGCCGGTGCATTAGTTCCGCCAAATA
AGCATCTTGAATCAGGTTACCTTTATATCGGCTCTCCCGCTAAAGCGGCGCGTAAATTAACTGATGATGAACTTGCCTTT
CTGCCACGTTCTGCAGCGCATTATGTCACACTAAAAAATGAGTATATTGCTCAGGGTTAA

Upstream 100 bases:

>100_bases
TTATACACGCCTTACAAACAACTTATCCACAAACTTTGCTTTATTACCCACATGATTTTGCCGTATAGTTTGTTTTCTTA
TTTATTTATTGAGGTTTATT

Downstream 100 bases:

>100_bases
CATTATTTGTTCCCACGCAGAAACGTGGGAACAAATAGATAGGTTATTTTAAATTTTGCTCATTCCTTTATGGAGCAACA
TACTTGTTTTGTAATTCAAC

Product: carbonic anhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MLPVLRGYKNSFPVLGDSVYIDPFSSIIGDVTLGDDVNIWPMCVVRGDVNFITIGKRSNIQDGSILHVARAGEASIDGYP
LIIGDDVTVGHKAMLHACRIGNRVLIGMGAIVLDNAQIDDDVILAAGALVPPNKHLESGYLYIGSPAKAARKLTDDELAF
LPRSAAHYVTLKNEYIAQG

Sequences:

>Translated_179_residues
MLPVLRGYKNSFPVLGDSVYIDPFSSIIGDVTLGDDVNIWPMCVVRGDVNFITIGKRSNIQDGSILHVARAGEASIDGYP
LIIGDDVTVGHKAMLHACRIGNRVLIGMGAIVLDNAQIDDDVILAAGALVPPNKHLESGYLYIGSPAKAARKLTDDELAF
LPRSAAHYVTLKNEYIAQG
>Mature_179_residues
MLPVLRGYKNSFPVLGDSVYIDPFSSIIGDVTLGDDVNIWPMCVVRGDVNFITIGKRSNIQDGSILHVARAGEASIDGYP
LIIGDDVTVGHKAMLHACRIGNRVLIGMGAIVLDNAQIDDDVILAAGALVPPNKHLESGYLYIGSPAKAARKLTDDELAF
LPRSAAHYVTLKNEYIAQG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=179, Percent_Identity=59.2178770949721, Blast_Score=216, Evalue=5e-58,
Organism=Escherichia coli, GI1787667, Length=162, Percent_Identity=35.8024691358025, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI87081681, Length=164, Percent_Identity=34.1463414634146, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19186; Mature: 19186

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPVLRGYKNSFPVLGDSVYIDPFSSIIGDVTLGDDVNIWPMCVVRGDVNFITIGKRSNI
CCCCCCCCCCCCCCCCCEEEECCHHHHHCCEEECCCCCEEEEEEEECCCCEEEECCCCCC
QDGSILHVARAGEASIDGYPLIIGDDVTVGHKAMLHACRIGNRVLIGMGAIVLDNAQIDD
CCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECEEEEECCCCCC
DVILAAGALVPPNKHLESGYLYIGSPAKAARKLTDDELAFLPRSAAHYVTLKNEYIAQG
CEEEEECCCCCCCCCCCCCEEEEECCHHHHHHCCCCHHEECCCCCEEEEEECCCEECCC
>Mature Secondary Structure
MLPVLRGYKNSFPVLGDSVYIDPFSSIIGDVTLGDDVNIWPMCVVRGDVNFITIGKRSNI
CCCCCCCCCCCCCCCCCEEEECCHHHHHCCEEECCCCCEEEEEEEECCCCEEEECCCCCC
QDGSILHVARAGEASIDGYPLIIGDDVTVGHKAMLHACRIGNRVLIGMGAIVLDNAQIDD
CCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECEEEEECCCCCC
DVILAAGALVPPNKHLESGYLYIGSPAKAARKLTDDELAFLPRSAAHYVTLKNEYIAQG
CEEEEECCCCCCCCCCCCCEEEEECCHHHHHHCCCCHHEECCCCCEEEEEECCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]