| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is ppc
Identifier: 119944012
GI number: 119944012
Start: 285034
End: 287670
Strand: Reverse
Name: ppc
Synonym: Ping_0226
Alternate gene names: 119944012
Gene position: 287670-285034 (Counterclockwise)
Preceding gene: 119944013
Following gene: 119944011
Centisome position: 6.31
GC content: 44.52
Gene sequence:
>2637_bases ATGACAGAAGAATATTCAAATTTACGCAGTAACGTCAGTTTATTAGGACAGCTGCTTGGTAAAAGCATTGGTGGTCATCT CGGTGAAGAGTTTCTGGATAAAATAGAAACTATCCGTCAACTATCCAAATCCTCCCGTGCGGGTAATCAACAGGATGGTG TCGCACTGATCGACATGTTGACCCATCTTTCCGATGATGAATTAGTCCCTGTTGCGCGTGCTTTTACCCACTTTCTAAAC CTGGCAAATATCGCTGAGCAGTTTCATGGCATTTCTCGCCACTGCGACAGTGGGGTCTGTGCACCGGAGCCAATCAAAGA TTTAATAAGCAAATTTAAAAATTCCAATTTATCGCAGCAGGAAATGCAGCAGAGCGTTAATGAATTAAAAATGGAGATGG TACTGACCGCTCACCCTACCGAAATAACGCGGCGCACACTTATCCATAAGCATATCGCCATTAATGACTGTCTGAGTTAT TTAGAAATTAGCGATATTTCTGATAAAGAACGCGACCTTTTGTTAAATCGTTTAGAGCAGTTAATCACCCAAGCCTGGCA TACCAATGATATTCGCCAAAAGCGTCCGACTCCGGTAGATGAAGCTAAATGGGGATTTGCGACCATTGAAAAAAGTTTAT GGCAGGCTGTTCCGCAATTTATTCGCGATCTGGAAAGTGAATTACAAAGCGGTTTAGGTTTATCATTACCCCTTGAAGCG TCCCCCATCACCTTTACCTCATGGATGGGCGGCGACCGAGATGGCAACCCCTTTGTAACCGCCAAAGTAACCCAGGAAGT ATTATTATCCAGCCGTTGGGTCGCGGTTAGTTTATACCTTAAAGATATTAGCCAACTCACCGATGAGTTATCAATGGATA ACTGCGATCCAGCTCTTCGATCAGTGGTTGGAGATAATGCGGCTGAACCTTACCGTGCTATTTTACGCAAATTGCGCTCG GAATTAAAAGAAACTTTAGCATCTTTAAGTGCCACTTTGCAGAATCAGCGCAGTGATGAAAAAGATATTATCACCACCAG CAAACAGTTAAAAGAACCACTGCTTTTATGTTATCACTCCCTTAAGAATATGGGGATGAACTCCATTGCCAATGGTTTAA TTTTAGATATTTTACGCCGCCTCAACTGTTTTGGTATCAACCTGTTAAAACTGGATATCCGTCAAGATGCTGAACGCCAC GGCAATACATTATCGGAATTAACCCGCTACTTAGGCATTGGTGATTACAATGCCTGGAATGAAGAAGACAAGCAGGCCTT TTTACTGCAGGAACTTAACAATAAGCGACCACTCTTCCCCTCTCAGTGGAACCCATCTGCAGAAGTACAGGAAGTATTAG ATACCTGTAAAGTTGTTGCGCAAACAGATCCTGAAGCTTTAGGTATCTATATTATCTCTATGGCACGCCAGGCATCCGAT GTACTGGCTGTACAGTTAATATTAAAAGAAGTGGGCTGTCCGTTCCGTATTCCTGTTGCGCCATTATTCGAAACGCTTGA CGATTTGAATAACTCGGCAGCAGTGATGAAACGCTTGTTTGCTATCGATTGGTATCGTGGTTATATCAATGGTATTCAGC ATGTCATGATAGGTTACTCCGACTCAGCCAAAGATGCGGGGGTGATAGCCGCCAACTGGGCACAATATACATCGCAGGAG GCATTGGTTAAACTCAGTGCTGAAAATGATATCAATCTGGTTTTATTCCACGGACGTGGCGGCACAATAGGTCGTGGTGG TGCGCCGGCTCGCCAAGCCTTATTATCACAACCGCCGGGATCTTTAAAAGGTGGCTTACGGGTCACTGAACAGGGTGAGA TGATCCGCTTTAAATTTGGTTTACCAAAAGTTGCGGTGCAAAGTTTAAACCAATATGCCGCTGCGGTATTAGAGGCTAAC CTGCTGCCGCCACCTGCGCCAAAACAGGAATGGCGTGATGTAATGCAACAGTTTTCAGATCAGTCTTGTCAGGAATACCG CCATTTTGTGCGCGAAGAGCCAGATTTTGTCCCCTACTTCCGCAGCGTAACCCCGGAAGTGGAACTGGGTAAATTAGCGC TAGGCAGTCGTCCTTCTAAGCGCAAACCAAGCGGTGGTATAGAAAGCTTGCGCGCTATTCCGTGGATTTTCGCCTGGAGT CAAAATCGTTTAATGTTGCCAGCATGGCTTGGGGCAGGTACCTCACTAAAAACATTATTGAATGAAGGAAAAAAACCGCT GCTTCAGGAGATGTATCAACACTGGCCATTTTTCCACACCCGTTTAGAAATGTTTGAAATGGTATTTTTAAAAGCGGATG AGGAACTCACTAAATTCTACGAAGAACGCCTTGTGCCGAAAGAATTATGGCCACTTGGACAACGTTTACGTGATAACCTC ACACTCACTCGAGAGACTGTTTTAGAAACTATTCCGGATCATCAATTGATGCAGGAACAGCCTTGGATTAAGGAGTCTAT TTCACTGCGTAACCCTTATGTTGATCCGCTCAACATGTTACAAGCAGAGCTCCTTTACCGTTCACGTGAAAATGGTGATG AAATTTGTCCGGTGGTCGACCAGGCACTGATGGTCACTATTGCCGGTATTGCCGCAGGACTTCGTAATACAGGTTAA
Upstream 100 bases:
>100_bases TGATGGATCGTTGACTGCTGACCTTAATCTGATAGTTTATTGTTGTTACTTTATTTTTTTATGTGATTTTATGTAGTTTT ATTACTAATTCGGAGGGCAT
Downstream 100 bases:
>100_bases GCAATAAAAAAGGTGCAGGCTAAAGGCCAGCACCTTCTGCTCTTTGCCTGATAAGATAAGTGTTAATACAGTTATTTATT TATCACCCTGCTATCAGGTA
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase
Number of amino acids: Translated: 878; Mature: 877
Protein sequence:
>878_residues MTEEYSNLRSNVSLLGQLLGKSIGGHLGEEFLDKIETIRQLSKSSRAGNQQDGVALIDMLTHLSDDELVPVARAFTHFLN LANIAEQFHGISRHCDSGVCAPEPIKDLISKFKNSNLSQQEMQQSVNELKMEMVLTAHPTEITRRTLIHKHIAINDCLSY LEISDISDKERDLLLNRLEQLITQAWHTNDIRQKRPTPVDEAKWGFATIEKSLWQAVPQFIRDLESELQSGLGLSLPLEA SPITFTSWMGGDRDGNPFVTAKVTQEVLLSSRWVAVSLYLKDISQLTDELSMDNCDPALRSVVGDNAAEPYRAILRKLRS ELKETLASLSATLQNQRSDEKDIITTSKQLKEPLLLCYHSLKNMGMNSIANGLILDILRRLNCFGINLLKLDIRQDAERH GNTLSELTRYLGIGDYNAWNEEDKQAFLLQELNNKRPLFPSQWNPSAEVQEVLDTCKVVAQTDPEALGIYIISMARQASD VLAVQLILKEVGCPFRIPVAPLFETLDDLNNSAAVMKRLFAIDWYRGYINGIQHVMIGYSDSAKDAGVIAANWAQYTSQE ALVKLSAENDINLVLFHGRGGTIGRGGAPARQALLSQPPGSLKGGLRVTEQGEMIRFKFGLPKVAVQSLNQYAAAVLEAN LLPPPAPKQEWRDVMQQFSDQSCQEYRHFVREEPDFVPYFRSVTPEVELGKLALGSRPSKRKPSGGIESLRAIPWIFAWS QNRLMLPAWLGAGTSLKTLLNEGKKPLLQEMYQHWPFFHTRLEMFEMVFLKADEELTKFYEERLVPKELWPLGQRLRDNL TLTRETVLETIPDHQLMQEQPWIKESISLRNPYVDPLNMLQAELLYRSRENGDEICPVVDQALMVTIAGIAAGLRNTG
Sequences:
>Translated_878_residues MTEEYSNLRSNVSLLGQLLGKSIGGHLGEEFLDKIETIRQLSKSSRAGNQQDGVALIDMLTHLSDDELVPVARAFTHFLN LANIAEQFHGISRHCDSGVCAPEPIKDLISKFKNSNLSQQEMQQSVNELKMEMVLTAHPTEITRRTLIHKHIAINDCLSY LEISDISDKERDLLLNRLEQLITQAWHTNDIRQKRPTPVDEAKWGFATIEKSLWQAVPQFIRDLESELQSGLGLSLPLEA SPITFTSWMGGDRDGNPFVTAKVTQEVLLSSRWVAVSLYLKDISQLTDELSMDNCDPALRSVVGDNAAEPYRAILRKLRS ELKETLASLSATLQNQRSDEKDIITTSKQLKEPLLLCYHSLKNMGMNSIANGLILDILRRLNCFGINLLKLDIRQDAERH GNTLSELTRYLGIGDYNAWNEEDKQAFLLQELNNKRPLFPSQWNPSAEVQEVLDTCKVVAQTDPEALGIYIISMARQASD VLAVQLILKEVGCPFRIPVAPLFETLDDLNNSAAVMKRLFAIDWYRGYINGIQHVMIGYSDSAKDAGVIAANWAQYTSQE ALVKLSAENDINLVLFHGRGGTIGRGGAPARQALLSQPPGSLKGGLRVTEQGEMIRFKFGLPKVAVQSLNQYAAAVLEAN LLPPPAPKQEWRDVMQQFSDQSCQEYRHFVREEPDFVPYFRSVTPEVELGKLALGSRPSKRKPSGGIESLRAIPWIFAWS QNRLMLPAWLGAGTSLKTLLNEGKKPLLQEMYQHWPFFHTRLEMFEMVFLKADEELTKFYEERLVPKELWPLGQRLRDNL TLTRETVLETIPDHQLMQEQPWIKESISLRNPYVDPLNMLQAELLYRSRENGDEICPVVDQALMVTIAGIAAGLRNTG >Mature_877_residues TEEYSNLRSNVSLLGQLLGKSIGGHLGEEFLDKIETIRQLSKSSRAGNQQDGVALIDMLTHLSDDELVPVARAFTHFLNL ANIAEQFHGISRHCDSGVCAPEPIKDLISKFKNSNLSQQEMQQSVNELKMEMVLTAHPTEITRRTLIHKHIAINDCLSYL EISDISDKERDLLLNRLEQLITQAWHTNDIRQKRPTPVDEAKWGFATIEKSLWQAVPQFIRDLESELQSGLGLSLPLEAS PITFTSWMGGDRDGNPFVTAKVTQEVLLSSRWVAVSLYLKDISQLTDELSMDNCDPALRSVVGDNAAEPYRAILRKLRSE LKETLASLSATLQNQRSDEKDIITTSKQLKEPLLLCYHSLKNMGMNSIANGLILDILRRLNCFGINLLKLDIRQDAERHG NTLSELTRYLGIGDYNAWNEEDKQAFLLQELNNKRPLFPSQWNPSAEVQEVLDTCKVVAQTDPEALGIYIISMARQASDV LAVQLILKEVGCPFRIPVAPLFETLDDLNNSAAVMKRLFAIDWYRGYINGIQHVMIGYSDSAKDAGVIAANWAQYTSQEA LVKLSAENDINLVLFHGRGGTIGRGGAPARQALLSQPPGSLKGGLRVTEQGEMIRFKFGLPKVAVQSLNQYAAAVLEANL LPPPAPKQEWRDVMQQFSDQSCQEYRHFVREEPDFVPYFRSVTPEVELGKLALGSRPSKRKPSGGIESLRAIPWIFAWSQ NRLMLPAWLGAGTSLKTLLNEGKKPLLQEMYQHWPFFHTRLEMFEMVFLKADEELTKFYEERLVPKELWPLGQRLRDNLT LTRETVLETIPDHQLMQEQPWIKESISLRNPYVDPLNMLQAELLYRSRENGDEICPVVDQALMVTIAGIAAGLRNTG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family
Homologues:
Organism=Escherichia coli, GI1790393, Length=884, Percent_Identity=60.0678733031674, Blast_Score=1053, Evalue=0.0,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): CAPP_PSYIN (A1SRH8)
Other databases:
- EMBL: CP000510 - RefSeq: YP_941692.1 - ProteinModelPortal: A1SRH8 - SMR: A1SRH8 - STRING: A1SRH8 - GeneID: 4625786 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0226 - eggNOG: COG2352 - HOGENOM: HBG351035 - OMA: AIPWVFG - PhylomeDB: A1SRH8 - ProtClustDB: PRK00009 - BioCyc: PING357804:PING_0226-MONOMER - HAMAP: MF_00595 - InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 - PRINTS: PR00150
Pfam domain/function: PF00311 PEPcase; SSF51621 Pyrv/PenolPyrv_Kinase_cat
EC number: =4.1.1.31
Molecular weight: Translated: 98947; Mature: 98815
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00781 PEPCASE_1; PS00393 PEPCASE_2
Important sites: ACT_SITE 138-138 ACT_SITE 544-544
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEYSNLRSNVSLLGQLLGKSIGGHLGEEFLDKIETIRQLSKSSRAGNQQDGVALIDML CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH THLSDDELVPVARAFTHFLNLANIAEQFHGISRHCDSGVCAPEPIKDLISKFKNSNLSQQ HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHH EMQQSVNELKMEMVLTAHPTEITRRTLIHKHIAINDCLSYLEISDISDKERDLLLNRLEQ HHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LITQAWHTNDIRQKRPTPVDEAKWGFATIEKSLWQAVPQFIRDLESELQSGLGLSLPLEA HHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SPITFTSWMGGDRDGNPFVTAKVTQEVLLSSRWVAVSLYLKDISQLTDELSMDNCDPALR CCCEEECCCCCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH SVVGDNAAEPYRAILRKLRSELKETLASLSATLQNQRSDEKDIITTSKQLKEPLLLCYHS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LKNMGMNSIANGLILDILRRLNCFGINLLKLDIRQDAERHGNTLSELTRYLGIGDYNAWN HHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCHHHHHHHHHCCCCCCCCC EEDKQAFLLQELNNKRPLFPSQWNPSAEVQEVLDTCKVVAQTDPEALGIYIISMARQASD CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VLAVQLILKEVGCPFRIPVAPLFETLDDLNNSAAVMKRLFAIDWYRGYINGIQHVMIGYS HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DSAKDAGVIAANWAQYTSQEALVKLSAENDINLVLFHGRGGTIGRGGAPARQALLSQPPG CCCCCCCEEEEHHHHHCCHHHHEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCC SLKGGLRVTEQGEMIRFKFGLPKVAVQSLNQYAAAVLEANLLPPPAPKQEWRDVMQQFSD CCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH QSCQEYRHFVREEPDFVPYFRSVTPEVELGKLALGSRPSKRKPSGGIESLRAIPWIFAWS HHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHEEEC QNRLMLPAWLGAGTSLKTLLNEGKKPLLQEMYQHWPFFHTRLEMFEMVFLKADEELTKFY CCCEEEEHHHCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHH EERLVPKELWPLGQRLRDNLTLTRETVLETIPDHQLMQEQPWIKESISLRNPYVDPLNML HHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHCCCCCCCHHHHH QAELLYRSRENGDEICPVVDQALMVTIAGIAAGLRNTG HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TEEYSNLRSNVSLLGQLLGKSIGGHLGEEFLDKIETIRQLSKSSRAGNQQDGVALIDML CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH THLSDDELVPVARAFTHFLNLANIAEQFHGISRHCDSGVCAPEPIKDLISKFKNSNLSQQ HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHH EMQQSVNELKMEMVLTAHPTEITRRTLIHKHIAINDCLSYLEISDISDKERDLLLNRLEQ HHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LITQAWHTNDIRQKRPTPVDEAKWGFATIEKSLWQAVPQFIRDLESELQSGLGLSLPLEA HHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SPITFTSWMGGDRDGNPFVTAKVTQEVLLSSRWVAVSLYLKDISQLTDELSMDNCDPALR CCCEEECCCCCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH SVVGDNAAEPYRAILRKLRSELKETLASLSATLQNQRSDEKDIITTSKQLKEPLLLCYHS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LKNMGMNSIANGLILDILRRLNCFGINLLKLDIRQDAERHGNTLSELTRYLGIGDYNAWN HHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCHHHHHHHHHCCCCCCCCC EEDKQAFLLQELNNKRPLFPSQWNPSAEVQEVLDTCKVVAQTDPEALGIYIISMARQASD CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VLAVQLILKEVGCPFRIPVAPLFETLDDLNNSAAVMKRLFAIDWYRGYINGIQHVMIGYS HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DSAKDAGVIAANWAQYTSQEALVKLSAENDINLVLFHGRGGTIGRGGAPARQALLSQPPG CCCCCCCEEEEHHHHHCCHHHHEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCC SLKGGLRVTEQGEMIRFKFGLPKVAVQSLNQYAAAVLEANLLPPPAPKQEWRDVMQQFSD CCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH QSCQEYRHFVREEPDFVPYFRSVTPEVELGKLALGSRPSKRKPSGGIESLRAIPWIFAWS HHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHEEEC QNRLMLPAWLGAGTSLKTLLNEGKKPLLQEMYQHWPFFHTRLEMFEMVFLKADEELTKFY CCCEEEEHHHCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHH EERLVPKELWPLGQRLRDNLTLTRETVLETIPDHQLMQEQPWIKESISLRNPYVDPLNML HHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHCCCCCCCHHHHH QAELLYRSRENGDEICPVVDQALMVTIAGIAAGLRNTG HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA