| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is hslJ [C]
Identifier: 119943989
GI number: 119943989
Start: 254890
End: 255348
Strand: Reverse
Name: hslJ [C]
Synonym: Ping_0202
Alternate gene names: 119943989
Gene position: 255348-254890 (Counterclockwise)
Preceding gene: 119943990
Following gene: 119943987
Centisome position: 5.6
GC content: 41.39
Gene sequence:
>459_bases TTGAAATTGTTTAAGCAACTCTCGCTATTATTTATATCGACGGCACTTGTCGCCTGCAGTCTAAAAACAGCTGACAGCAT GACATCTAAAAACATGATCTCGAAAAACAGGGTATTGCAAAATACAGCGTTCTCACAGATCCAAAAAAAATGGCAATTAG AAAGCATTGACGGCACCCCTATTAGTGCCGAGATAAGCTCAACCTTAGCGATTGATCCACAGAGGCAGGCAACGGGGAGA CTTGCCTGCAATAACTTTTTTGGCAGATTGGAATTAAAAGATAATACGCTTAAGATTGATCAGATGGGCAGCACACGGAT GCTTTGTGCCGGGGTAATGAACGAGATAGAAATGATCGTTTCCAGTGTGTTGAATAACCGCTCAGAAATTAACTTCACGA ACAATAGATTATCTCTTACAGGTCAAAAACACACTCTTATCTATCGCGCTGACAGGTAG
Upstream 100 bases:
>100_bases GGATCCATTTATCCAAAGTAATGCGTCAAATTAAAAAACTACCCAGTGTTAAAAGTGTTAAACGCAGTAATCAAAAGGAC AGATCAAAAAGGCAAATTAA
Downstream 100 bases:
>100_bases ATTTTGAAACAATCTGCAAATCTTATCCTGATTGGCTTCTTGCAAGCCCTACCAGACGCGAAAAAAGACGTTTTAGCAGA GGTGGGATTGAATCAGTGCC
Product: heat shock protein HslJ
Products: NA
Alternate protein names: Heat Shock Protein HslJ; Heat-Inducible Protein
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MKLFKQLSLLFISTALVACSLKTADSMTSKNMISKNRVLQNTAFSQIQKKWQLESIDGTPISAEISSTLAIDPQRQATGR LACNNFFGRLELKDNTLKIDQMGSTRMLCAGVMNEIEMIVSSVLNNRSEINFTNNRLSLTGQKHTLIYRADR
Sequences:
>Translated_152_residues MKLFKQLSLLFISTALVACSLKTADSMTSKNMISKNRVLQNTAFSQIQKKWQLESIDGTPISAEISSTLAIDPQRQATGR LACNNFFGRLELKDNTLKIDQMGSTRMLCAGVMNEIEMIVSSVLNNRSEINFTNNRLSLTGQKHTLIYRADR >Mature_152_residues MKLFKQLSLLFISTALVACSLKTADSMTSKNMISKNRVLQNTAFSQIQKKWQLESIDGTPISAEISSTLAIDPQRQATGR LACNNFFGRLELKDNTLKIDQMGSTRMLCAGVMNEIEMIVSSVLNNRSEINFTNNRLSLTGQKHTLIYRADR
Specific function: Unknown
COG id: COG3187
COG function: function code O; Heat shock protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17035; Mature: 17035
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFKQLSLLFISTALVACSLKTADSMTSKNMISKNRVLQNTAFSQIQKKWQLESIDGTP CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ISAEISSTLAIDPQRQATGRLACNNFFGRLELKDNTLKIDQMGSTRMLCAGVMNEIEMIV CCCCCCCEEEECCCCCCCCCEEECCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHH SSVLNNRSEINFTNNRLSLTGQKHTLIYRADR HHHHCCCCCEEECCCEEEECCCCEEEEEEECC >Mature Secondary Structure MKLFKQLSLLFISTALVACSLKTADSMTSKNMISKNRVLQNTAFSQIQKKWQLESIDGTP CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ISAEISSTLAIDPQRQATGRLACNNFFGRLELKDNTLKIDQMGSTRMLCAGVMNEIEMIV CCCCCCCEEEECCCCCCCCCEEECCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHH SSVLNNRSEINFTNNRLSLTGQKHTLIYRADR HHHHCCCCCEEECCCEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA