| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is exeA [H]
Identifier: 119943964
GI number: 119943964
Start: 225135
End: 226889
Strand: Direct
Name: exeA [H]
Synonym: Ping_0177
Alternate gene names: 119943964
Gene position: 225135-226889 (Clockwise)
Preceding gene: 119943961
Following gene: 119943965
Centisome position: 4.94
GC content: 41.48
Gene sequence:
>1755_bases ATGTATCAAGATTTTTTCTCTTTAAAAGAGCAACCCTTTTCGATCTCGCCTGATCCCGATTTTTTATTTTTGAGCAACCG TCATCAAGAGGCAATAGCCCATTTGCAATATGGTGTTCAAGGTAACGGCGGGTTCGTCTTATTAACTGGTGAAGTGGGTA CGGGAAAAACCACTGTCTGCCGTAAATTATTGCAGGAGATCGGTGCAACCACCGATATCGCTTTTATTTTAAACCCGGCT TTAACTGATATTGAATTGCTGGCCACTGTCTGTGATGAATTTCATATTGATTATGAAAAAGATAAGATCAGTTTAAAATT ATTATTTGACAGCTTAACCGCTTGGATGATGAATAACCATCATCAAGGACGGAGTGCGATTGTATTAATTGATGAAGCAC AACATCTTAGCTTCTCGGTATTAGAGCAACTCCGTTTGCTCACCAATATTGAATCCAATAATAAAAAACCATTACAGGTC ATTTTAATTGGCCAAACCGAGTTACAGCAAAAACTGAAGCAGCCTGAGTTGCGCCAATTGGCACAGCGAATTAGCGCACG TTACCATCTGATGCCTTTGACGGAGCAGGAAAGCGTCTATTATATCCAGCATCGATTGAATGTTGCGGGGGTAAGTTTTC CGATTTTTGAACACCGGGCAGTAAGAGAAGTTTTTAAGCGCAGTCAGGGAGTCCCGCGCTTAATTAATTTACTTTGTGAT CGTAGCCTGCTCTGTGCATACACTCAAAATTCATTAAAAGTGACGGTGTTGATGGTAAAAAAAGCGAGTGATGAGATGGC GCTTTCACCACCTCAAACACTTTTTAATGCGATCTTCAAAAGCAGTTGGCGATTTATTGCTTTGAGCCTATTGGCTGTCT TCACTGCTTTTCAGGCTCCTGAACTGTTGAACCGCTTTAAAGAGGTCAAAGCACAACCGGCAGAATTAATCATACCAGCT ATAGCTGCCACATTAGGTGAGTCTCTGCCAGAACTGATCGTGCCTCCGGAAGAACATATTACGCCTCTGCCAGAAAATAT TGTGCCTCCCGAAGAGCTCATCGCGCCTCCCGCAGAATATACTGTGCCAACCGAATTGGAACAAGCCACCGAGGTTGGAG TATTACAGAAGAATGAATCTCCTGACTGGTTTGATAATTATGAGTTATTAGATATTTCCAATGCAACCTTTGCTAATGCC CTATTAAATTTATATGCTGTTTGGGGGTATCAGGTTGATCCCGAAACGGTTAATTGTGAACAGGGAAAAAGTGTGTTGTT ATCCTGTTATTCGGAAAATACCAGCCTGAAAAAATTAAAGCAGTTGAATTACCCCAGTGTGGTTAGACTTGAAAGGGATA ATTTAGAAAGTTTACATGCGGTGCTTTATGCCATTAATGACAGCTACCAATTATTGATTGACGGGCAAGTTATTGAGGTG TCAGAAACCTGGTTTAACACCTACTGGTCAGGGGAGCTAACGGTACTTTGGCAGGCACCCTTTGAATTACAGGGTAACCT TAAATTTGGCCAGCAAAGTGAGCAAATAGCCTGGCTGGCGAGGCAACTTAATAAGTTGCAGGGAATGCCGATTGAGAGTA AAAATCGCTTCGATTTGCCATTATTACAGCAAGTGATGCGTTTTCAGATAGAAAATGGCTTAAAAGATGATGGTATTGTG GGCGAGCGAACCTTAATACCACTAATGCAAATAGTTAATTCTCAGTTGCCACGACTACAACAGGAAGTAAATTAA
Upstream 100 bases:
>100_bases GCCTCCAACTAAAAATATTTGCATTGTTTTTCCTCTTTATGTCTTAGTTAGTTATTATATGCAATAACTTCTCTTGTCAC TATTTTCTTTGGATTTTGTT
Downstream 100 bases:
>100_bases TGTCAACAATTCTAGCGGCACTGCAAAAGCAAAAATCATCACCAGGCGCTCATTTTATCCAACAACCAGAGGTTGAAAAA GGACTGTTTAAATGGCGAGT
Product: general secretion pathway ATPase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MYQDFFSLKEQPFSISPDPDFLFLSNRHQEAIAHLQYGVQGNGGFVLLTGEVGTGKTTVCRKLLQEIGATTDIAFILNPA LTDIELLATVCDEFHIDYEKDKISLKLLFDSLTAWMMNNHHQGRSAIVLIDEAQHLSFSVLEQLRLLTNIESNNKKPLQV ILIGQTELQQKLKQPELRQLAQRISARYHLMPLTEQESVYYIQHRLNVAGVSFPIFEHRAVREVFKRSQGVPRLINLLCD RSLLCAYTQNSLKVTVLMVKKASDEMALSPPQTLFNAIFKSSWRFIALSLLAVFTAFQAPELLNRFKEVKAQPAELIIPA IAATLGESLPELIVPPEEHITPLPENIVPPEELIAPPAEYTVPTELEQATEVGVLQKNESPDWFDNYELLDISNATFANA LLNLYAVWGYQVDPETVNCEQGKSVLLSCYSENTSLKKLKQLNYPSVVRLERDNLESLHAVLYAINDSYQLLIDGQVIEV SETWFNTYWSGELTVLWQAPFELQGNLKFGQQSEQIAWLARQLNKLQGMPIESKNRFDLPLLQQVMRFQIENGLKDDGIV GERTLIPLMQIVNSQLPRLQQEVN
Sequences:
>Translated_584_residues MYQDFFSLKEQPFSISPDPDFLFLSNRHQEAIAHLQYGVQGNGGFVLLTGEVGTGKTTVCRKLLQEIGATTDIAFILNPA LTDIELLATVCDEFHIDYEKDKISLKLLFDSLTAWMMNNHHQGRSAIVLIDEAQHLSFSVLEQLRLLTNIESNNKKPLQV ILIGQTELQQKLKQPELRQLAQRISARYHLMPLTEQESVYYIQHRLNVAGVSFPIFEHRAVREVFKRSQGVPRLINLLCD RSLLCAYTQNSLKVTVLMVKKASDEMALSPPQTLFNAIFKSSWRFIALSLLAVFTAFQAPELLNRFKEVKAQPAELIIPA IAATLGESLPELIVPPEEHITPLPENIVPPEELIAPPAEYTVPTELEQATEVGVLQKNESPDWFDNYELLDISNATFANA LLNLYAVWGYQVDPETVNCEQGKSVLLSCYSENTSLKKLKQLNYPSVVRLERDNLESLHAVLYAINDSYQLLIDGQVIEV SETWFNTYWSGELTVLWQAPFELQGNLKFGQQSEQIAWLARQLNKLQGMPIESKNRFDLPLLQQVMRFQIENGLKDDGIV GERTLIPLMQIVNSQLPRLQQEVN >Mature_584_residues MYQDFFSLKEQPFSISPDPDFLFLSNRHQEAIAHLQYGVQGNGGFVLLTGEVGTGKTTVCRKLLQEIGATTDIAFILNPA LTDIELLATVCDEFHIDYEKDKISLKLLFDSLTAWMMNNHHQGRSAIVLIDEAQHLSFSVLEQLRLLTNIESNNKKPLQV ILIGQTELQQKLKQPELRQLAQRISARYHLMPLTEQESVYYIQHRLNVAGVSFPIFEHRAVREVFKRSQGVPRLINLLCD RSLLCAYTQNSLKVTVLMVKKASDEMALSPPQTLFNAIFKSSWRFIALSLLAVFTAFQAPELLNRFKEVKAQPAELIIPA IAATLGESLPELIVPPEEHITPLPENIVPPEELIAPPAEYTVPTELEQATEVGVLQKNESPDWFDNYELLDISNATFANA LLNLYAVWGYQVDPETVNCEQGKSVLLSCYSENTSLKKLKQLNYPSVVRLERDNLESLHAVLYAINDSYQLLIDGQVIEV SETWFNTYWSGELTVLWQAPFELQGNLKFGQQSEQIAWLARQLNKLQGMPIESKNRFDLPLLQQVMRFQIENGLKDDGIV GERTLIPLMQIVNSQLPRLQQEVN
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
Organism=Escherichia coli, GI1789720, Length=196, Percent_Identity=28.5714285714286, Blast_Score=94, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 66288; Mature: 66288
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQDFFSLKEQPFSISPDPDFLFLSNRHQEAIAHLQYGVQGNGGFVLLTGEVGTGKTTVC CCCHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHCCEECCCCEEEEECCCCCCHHHHH RKLLQEIGATTDIAFILNPALTDIELLATVCDEFHIDYEKDKISLKLLFDSLTAWMMNNH HHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCC HQGRSAIVLIDEAQHLSFSVLEQLRLLTNIESNNKKPLQVILIGQTELQQKLKQPELRQL CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHCCCHHHHH AQRISARYHLMPLTEQESVYYIQHRLNVAGVSFPIFEHRAVREVFKRSQGVPRLINLLCD HHHHCCCEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHC RSLLCAYTQNSLKVTVLMVKKASDEMALSPPQTLFNAIFKSSWRFIALSLLAVFTAFQAP CCCEEEECCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCH ELLNRFKEVKAQPAELIIPAIAATLGESLPELIVPPEEHITPLPENIVPPEELIAPPAEY HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHCCCCHHHCCCCCCCCCCCHHHCCCCCCC TVPTELEQATEVGVLQKNESPDWFDNYELLDISNATFANALLNLYAVWGYQVDPETVNCE CCCHHHHHHHHCCCEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCEEECCCCCCCC QGKSVLLSCYSENTSLKKLKQLNYPSVVRLERDNLESLHAVLYAINDSYQLLIDGQVIEV CCCEEEEEECCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHEECCCEEEEECCEEEEE SETWFNTYWSGELTVLWQAPFELQGNLKFGQQSEQIAWLARQLNKLQGMPIESKNRFDLP EHHHHHEEECCEEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCH LLQQVMRFQIENGLKDDGIVGERTLIPLMQIVNSQLPRLQQEVN HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYQDFFSLKEQPFSISPDPDFLFLSNRHQEAIAHLQYGVQGNGGFVLLTGEVGTGKTTVC CCCHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHCCEECCCCEEEEECCCCCCHHHHH RKLLQEIGATTDIAFILNPALTDIELLATVCDEFHIDYEKDKISLKLLFDSLTAWMMNNH HHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCC HQGRSAIVLIDEAQHLSFSVLEQLRLLTNIESNNKKPLQVILIGQTELQQKLKQPELRQL CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHCCCHHHHH AQRISARYHLMPLTEQESVYYIQHRLNVAGVSFPIFEHRAVREVFKRSQGVPRLINLLCD HHHHCCCEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHC RSLLCAYTQNSLKVTVLMVKKASDEMALSPPQTLFNAIFKSSWRFIALSLLAVFTAFQAP CCCEEEECCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCH ELLNRFKEVKAQPAELIIPAIAATLGESLPELIVPPEEHITPLPENIVPPEELIAPPAEY HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHCCCCHHHCCCCCCCCCCCHHHCCCCCCC TVPTELEQATEVGVLQKNESPDWFDNYELLDISNATFANALLNLYAVWGYQVDPETVNCE CCCHHHHHHHHCCCEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCEEECCCCCCCC QGKSVLLSCYSENTSLKKLKQLNYPSVVRLERDNLESLHAVLYAINDSYQLLIDGQVIEV CCCEEEEEECCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHEECCCEEEEECCEEEEE SETWFNTYWSGELTVLWQAPFELQGNLKFGQQSEQIAWLARQLNKLQGMPIESKNRFDLP EHHHHHEEECCEEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCH LLQQVMRFQIENGLKDDGIVGERTLIPLMQIVNSQLPRLQQEVN HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]