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The map label for this gene is ybbM [C]

Identifier: 119943962

GI number: 119943962

Start: 223058

End: 223783

Strand: Reverse

Name: ybbM [C]

Synonym: Ping_0175

Alternate gene names: 119943962

Gene position: 223783-223058 (Counterclockwise)

Preceding gene: 119943963

Following gene: 119943958

Centisome position: 4.91

GC content: 39.39

Gene sequence:

>726_bases
ATGTCTAATTCACTGACTATTCTCCCATTGCATAACTTGGCTATTGCCTTTATTCCGGTTTTCTTGGTGATCGTTATTTT
ATTTAAATGGTCACTAAACGGAAAATTTGCTCTCTATGCACTTTCTCGCATGTTAGTACAACTGCTGTTAGTCGGTTATT
TTCTTAATTATCTTTTTGCTGGTGCTAATGCTTGGATTGTTGTGCTGTTGTTAATGCTGATGGTCCTATTTTCCAGTTGG
ATTGCCTTAGGCAATATTAAAGAGCTGCGTTTGCCATTATTAAAACGAACGATGATATCCGTTGCAATAGGCGGTGGCTT
TACCTTATTAATTATTACCCAGGGCGTTTTAACATTACAGCCCTGGTATCAGGTACAAACCATGATCCCATTAGCGGGCA
TGATTTTTGCCAACTGTATGAATAGCGTCAGTCTTTCAGCAGAACGTTTTTATGCTGAGTTGTCGCGTGAGGCAGATTAT
ATTAATGCGCGTAAAACTGCATTTCATGCTTCAATGATCCCAAATATTAATGCGTTATTTGCGGTTGGATTGATCTCCTT
ACCGGGCATGATGACTGGACAAATCTTATCCGGTACCTCCCCCTTTATTGCGGCAAGGTACCAAATAGTAGTGATGTGTA
TGGTCTTTGCCTCGGCAGGCATTTCTTCGGCTTGTTTTTTAGTGCTTAATAAAAACACCATAAAAAATAACAGCTCAATC
ACTTAA

Upstream 100 bases:

>100_bases
AAAACATGCACGTATTCGATCAGTCGAACAGTATAAACAGAAGCACAGCGTATAATCGACTGACTTATTACGATCGCAAC
TTAATTTAAAGAGGCGGAAA

Downstream 100 bases:

>100_bases
CCTGCTCAAATTTAAGCTAAAGCACTAGACCGGTTAAAACTAGGTGCCCGACAAAATATAAGCTAAAGCACTGGACCTGT
TGAATCTAAGTGCCCGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSNSLTILPLHNLAIAFIPVFLVIVILFKWSLNGKFALYALSRMLVQLLLVGYFLNYLFAGANAWIVVLLLMLMVLFSSW
IALGNIKELRLPLLKRTMISVAIGGGFTLLIITQGVLTLQPWYQVQTMIPLAGMIFANCMNSVSLSAERFYAELSREADY
INARKTAFHASMIPNINALFAVGLISLPGMMTGQILSGTSPFIAARYQIVVMCMVFASAGISSACFLVLNKNTIKNNSSI
T

Sequences:

>Translated_241_residues
MSNSLTILPLHNLAIAFIPVFLVIVILFKWSLNGKFALYALSRMLVQLLLVGYFLNYLFAGANAWIVVLLLMLMVLFSSW
IALGNIKELRLPLLKRTMISVAIGGGFTLLIITQGVLTLQPWYQVQTMIPLAGMIFANCMNSVSLSAERFYAELSREADY
INARKTAFHASMIPNINALFAVGLISLPGMMTGQILSGTSPFIAARYQIVVMCMVFASAGISSACFLVLNKNTIKNNSSI
T
>Mature_240_residues
SNSLTILPLHNLAIAFIPVFLVIVILFKWSLNGKFALYALSRMLVQLLLVGYFLNYLFAGANAWIVVLLLMLMVLFSSWI
ALGNIKELRLPLLKRTMISVAIGGGFTLLIITQGVLTLQPWYQVQTMIPLAGMIFANCMNSVSLSAERFYAELSREADYI
NARKTAFHASMIPNINALFAVGLISLPGMMTGQILSGTSPFIAARYQIVVMCMVFASAGISSACFLVLNKNTIKNNSSIT

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=240, Percent_Identity=30, Blast_Score=103, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 26469; Mature: 26338

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSLTILPLHNLAIAFIPVFLVIVILFKWSLNGKFALYALSRMLVQLLLVGYFLNYLFA
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GANAWIVVLLLMLMVLFSSWIALGNIKELRLPLLKRTMISVAIGGGFTLLIITQGVLTLQ
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCEEEEEECCCHHEEC
PWYQVQTMIPLAGMIFANCMNSVSLSAERFYAELSREADYINARKTAFHASMIPNINALF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHH
AVGLISLPGMMTGQILSGTSPFIAARYQIVVMCMVFASAGISSACFLVLNKNTIKNNSSI
HHHHHHCCCHHHCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
T
C
>Mature Secondary Structure 
SNSLTILPLHNLAIAFIPVFLVIVILFKWSLNGKFALYALSRMLVQLLLVGYFLNYLFA
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GANAWIVVLLLMLMVLFSSWIALGNIKELRLPLLKRTMISVAIGGGFTLLIITQGVLTLQ
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCEEEEEECCCHHEEC
PWYQVQTMIPLAGMIFANCMNSVSLSAERFYAELSREADYINARKTAFHASMIPNINALF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHH
AVGLISLPGMMTGQILSGTSPFIAARYQIVVMCMVFASAGISSACFLVLNKNTIKNNSSI
HHHHHHCCCHHHCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
T
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]