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The map label for this gene is pilO

Identifier: 119943947

GI number: 119943947

Start: 210558

End: 211130

Strand: Direct

Name: pilO

Synonym: Ping_0160

Alternate gene names: NA

Gene position: 210558-211130 (Clockwise)

Preceding gene: 119943946

Following gene: 119943948

Centisome position: 4.62

GC content: 37.35

Gene sequence:

>573_bases
ATGGATTTAAATGACTTAGATTTTGAAACTGTAGGCAGTTGGCCGGCGCTACACAGAGTGGTATTTATTGCGTGTGTCTG
TGCTGTATTAAGTGGTGTTTTTTTTTATTTTATCACTATGCCACAGATAAATAATCTAGCAAAGGTTGAAGAAAAAGAAA
TTGCTTTAAAAAACGAGTTTAAGACAAAGGCTGCATTATCTTCTCATTTAGAAGAGTACCGCACGCAAATGGTCGATATT
AGGCTTGTTTTCAAGGGTCTGCTTAACAGGCTGCCGAGTAGTGCAGAGGTAGCTAGTTTACTTGATGATATTAGTTTTGT
TGGTGCCGATAATGGTCTGCAATTTAAAAGCATTAACTGGGGAATTAAAACAGAAGGGGAGCTTTCTACTGAAGTGCCTA
TTAGTATTCAAGTTATTGGTCGTTATCAAGATCTCGGGAATTTTGCCGCAGATATTGCAGCGTTGCCGCGCATCGTCATT
TTGGATAATCTAACATTGACGAAAGGTGAACAAGGTTTAATGACTTTAAATGTAATTGCTAAAACATATCGTTATAAGGA
GAGTCAAAAATGA

Upstream 100 bases:

>100_bases
CTTATATTAGCTCTATCATTTCTGGACCGACCGAACCTATAAAACTAAGTCAGTTCGTAATGAAATTTGTTGTCATTCCT
GAAAGAAAAGGGGGAGAGTG

Downstream 100 bases:

>100_bases
GGTTTTTTATCATTTTACTCATGACCTTTCCTTTATTCTCATGCGTGGATGCCGATATTGATGATTTAACTCGCTTTGTT
GCTGAAACTAAAACAAAAAA

Product: type IV pilus biogenesis protein PilO

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilO; Type 4 Fimbrial Biogenesis Protein PilO; Fimbrial Assembly Protein PilO; Fimbrial Assembly Membrane Protein; Type IV Pilus Assembly Protein PilO; Tfp Pilus Assembly Protein PilO; Pilus Assembly Protein; Fimbrial Type-4 Assembly Transmembrane Protein; Fimbrial Type-4 Assembly Membrane Transmembrane Protein; Pili Assembly Protein PilO; Pilus Iv Assembly Membrane Protein Pilo; Type IV Pilus Assembly Membrane Transmembrane Protein; Type 4 Fimbrial Biogenesis Protein; Pilus Assembly Protein Pilo; PilO Type IV Pilus Assembly Protein; Fimbrial Assembly Protein PilO-Like Protein; Fimbriae Biogenesis-Related Fusion Protein; Fimbrial Type-IV Assembly Protein PilO; Fimbrial Assembly Protein

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MDLNDLDFETVGSWPALHRVVFIACVCAVLSGVFFYFITMPQINNLAKVEEKEIALKNEFKTKAALSSHLEEYRTQMVDI
RLVFKGLLNRLPSSAEVASLLDDISFVGADNGLQFKSINWGIKTEGELSTEVPISIQVIGRYQDLGNFAADIAALPRIVI
LDNLTLTKGEQGLMTLNVIAKTYRYKESQK

Sequences:

>Translated_190_residues
MDLNDLDFETVGSWPALHRVVFIACVCAVLSGVFFYFITMPQINNLAKVEEKEIALKNEFKTKAALSSHLEEYRTQMVDI
RLVFKGLLNRLPSSAEVASLLDDISFVGADNGLQFKSINWGIKTEGELSTEVPISIQVIGRYQDLGNFAADIAALPRIVI
LDNLTLTKGEQGLMTLNVIAKTYRYKESQK
>Mature_190_residues
MDLNDLDFETVGSWPALHRVVFIACVCAVLSGVFFYFITMPQINNLAKVEEKEIALKNEFKTKAALSSHLEEYRTQMVDI
RLVFKGLLNRLPSSAEVASLLDDISFVGADNGLQFKSINWGIKTEGELSTEVPISIQVIGRYQDLGNFAADIAALPRIVI
LDNLTLTKGEQGLMTLNVIAKTYRYKESQK

Specific function: Unknown

COG id: COG3167

COG function: function code NU; Tfp pilus assembly protein PilO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21205; Mature: 21205

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLNDLDFETVGSWPALHRVVFIACVCAVLSGVFFYFITMPQINNLAKVEEKEIALKNEF
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KTKAALSSHLEEYRTQMVDIRLVFKGLLNRLPSSAEVASLLDDISFVGADNGLQFKSINW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECC
GIKTEGELSTEVPISIQVIGRYQDLGNFAADIAALPRIVILDNLTLTKGEQGLMTLNVIA
CCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCEEEEECCCEECCCCCCHHHHHHHH
KTYRYKESQK
HHHHHHCCCC
>Mature Secondary Structure
MDLNDLDFETVGSWPALHRVVFIACVCAVLSGVFFYFITMPQINNLAKVEEKEIALKNEF
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KTKAALSSHLEEYRTQMVDIRLVFKGLLNRLPSSAEVASLLDDISFVGADNGLQFKSINW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECC
GIKTEGELSTEVPISIQVIGRYQDLGNFAADIAALPRIVILDNLTLTKGEQGLMTLNVIA
CCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCEEEEECCCEECCCCCCHHHHHHHH
KTYRYKESQK
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA