| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119943918
Identifier: 119943918
GI number: 119943918
Start: 169555
End: 170247
Strand: Reverse
Name: 119943918
Synonym: Ping_0128
Alternate gene names: NA
Gene position: 170247-169555 (Counterclockwise)
Preceding gene: 119943919
Following gene: 119943917
Centisome position: 3.73
GC content: 39.97
Gene sequence:
>693_bases ATGAATATCGCATTTCTTCACACTCTTAAAGCCAACGAAGTACTTTTTAAGCAATATATTGATAAATATCTGAAATACCT TCCTGTAACAGTTTCTCATTTTACCAACGAACGTTTATTACAAAACGCCATAAAAGATGGCTTAACCGAGCAGATCGCCA CTGACGTACAGCAAAGCATCACAGAAATTTCAGCAGGTAATGCGGATATCATTATTTGTACCTGTTCTACCATTGGTGAT TTAGCTGAAAAAACACCCAATATTTCTCCCCAGATAATTCGTGTTGATCGACCAATGGCAGAAGTCGCTATGCAACATAA CACTATATTGGTACTTGCTGCTCTTTCTAGCACCTTGACACCTACCAGTGAATTATTGCACTCTGTGAATACTGCAACAA AAATCGACAATCATTCAGATCAAGCAACAACTCAACCAAAGAAGCTGCCAGTCATTCACACTGAACTAGTCCCTAAAGCC TGGTCTTATTATGCAGCCGGTAATACAGAAATGTATGCTAGAACCATCGCGGCATATATTAATGCGATCACCACTAAACC GGGTATTGTGATATTAGCGCAGGCGTCTATGGCTCCTGCGGCTCAGTATTGTCATAAAAACACCTTTGAAATATTAACCA GCCCTGAAATGTGCCTTCGTTATCTTGTAAAGAGAGTAAAGCTGCATGCCTGA
Upstream 100 bases:
>100_bases GTAAGCGCTGACAGTAAATAATATCAATCAGACAAGTATCTAACGATTAACTACTCCACAGTAGTATTACTTGAACACAT TTATAGAGAGAGCTTCACTA
Downstream 100 bases:
>100_bases ATTAGATTTTCCACAAGCTATAGGCCTTGTCGCTTTTTCAATCGGTGCGACAGCATTTTTGCATAAAGATGGGCATAAGT TTCGACTGCATCTCACTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MNIAFLHTLKANEVLFKQYIDKYLKYLPVTVSHFTNERLLQNAIKDGLTEQIATDVQQSITEISAGNADIIICTCSTIGD LAEKTPNISPQIIRVDRPMAEVAMQHNTILVLAALSSTLTPTSELLHSVNTATKIDNHSDQATTQPKKLPVIHTELVPKA WSYYAAGNTEMYARTIAAYINAITTKPGIVILAQASMAPAAQYCHKNTFEILTSPEMCLRYLVKRVKLHA
Sequences:
>Translated_230_residues MNIAFLHTLKANEVLFKQYIDKYLKYLPVTVSHFTNERLLQNAIKDGLTEQIATDVQQSITEISAGNADIIICTCSTIGD LAEKTPNISPQIIRVDRPMAEVAMQHNTILVLAALSSTLTPTSELLHSVNTATKIDNHSDQATTQPKKLPVIHTELVPKA WSYYAAGNTEMYARTIAAYINAITTKPGIVILAQASMAPAAQYCHKNTFEILTSPEMCLRYLVKRVKLHA >Mature_230_residues MNIAFLHTLKANEVLFKQYIDKYLKYLPVTVSHFTNERLLQNAIKDGLTEQIATDVQQSITEISAGNADIIICTCSTIGD LAEKTPNISPQIIRVDRPMAEVAMQHNTILVLAALSSTLTPTSELLHSVNTATKIDNHSDQATTQPKKLPVIHTELVPKA WSYYAAGNTEMYARTIAAYINAITTKPGIVILAQASMAPAAQYCHKNTFEILTSPEMCLRYLVKRVKLHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25438; Mature: 25438
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIAFLHTLKANEVLFKQYIDKYLKYLPVTVSHFTNERLLQNAIKDGLTEQIATDVQQSI CCEEEEEECCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEISAGNADIIICTCSTIGDLAEKTPNISPQIIRVDRPMAEVAMQHNTILVLAALSSTLT HHHCCCCCCEEEEECCHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEEEHHHCCC PTSELLHSVNTATKIDNHSDQATTQPKKLPVIHTELVPKAWSYYAAGNTEMYARTIAAYI CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHH NAITTKPGIVILAQASMAPAAQYCHKNTFEILTSPEMCLRYLVKRVKLHA HHHCCCCCEEEEEECCCCHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNIAFLHTLKANEVLFKQYIDKYLKYLPVTVSHFTNERLLQNAIKDGLTEQIATDVQQSI CCEEEEEECCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEISAGNADIIICTCSTIGDLAEKTPNISPQIIRVDRPMAEVAMQHNTILVLAALSSTLT HHHCCCCCCEEEEECCHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEEEHHHCCC PTSELLHSVNTATKIDNHSDQATTQPKKLPVIHTELVPKAWSYYAAGNTEMYARTIAAYI CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHH NAITTKPGIVILAQASMAPAAQYCHKNTFEILTSPEMCLRYLVKRVKLHA HHHCCCCCEEEEEECCCCHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA