| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119943914
Identifier: 119943914
GI number: 119943914
Start: 160558
End: 161634
Strand: Direct
Name: 119943914
Synonym: Ping_0121
Alternate gene names: NA
Gene position: 160558-161634 (Clockwise)
Preceding gene: 119943913
Following gene: 119943915
Centisome position: 3.52
GC content: 31.94
Gene sequence:
>1077_bases ATGAACGATGGAGTAGGCCGCAACCATTTGGGGGAACTCACAATAAATAATATTGTTCTGAAGTCATTTGATATTGTTCC AAATTCATTTACTGATATGCAACAAATGAATGAATCAAATAAAGTTAAAGTCCGATTATTTAACATCCAGAGTAATATTA TTCGTAATGATGAAAGAATTGAATTAGAAATGATCAATTCAGTCAAGAATGAGACATTTCTAGTTGTATTTGGTGGATGG ATACCTTGCGCATTTATCAAAAGCAACACGATACTATATGCGGATAGAAATGTTATAACTGAAATTACAACTAGATACAA AGGCGGAATAAAAAAAAGTGATAAAGCTCTCGATTATTTTGATAGCATTTTTTTACATAATAAGAGTGTAAGTATAGATA TTTCAGCTTTTGTAATAGAGGCAAATGAACGTAAAATACCAACGAATGAATTAATTAATCAGCAAGTGGCGAGTGTAAAA GAGTCACTTAAACGGGCACTGCCAAATCTTAAAATTGCTAATTATCCTGGTGGGAATAGTTATTATCATGATTTGAAGGA TTTATTAGAGCCAATCATGAAAAAACGAATGGCTTTTCTGCAAGAAGTTACACCTAAGCTGAATAGACAATTCACTGCAA AGTCGAGAAAAGAAGCTGTTAATGTTGTCTTTAAAGCTGCTAAGAAAGCCCAATTAAGTAAGAATGATCTAGTAATTGTT TTAGCATTACTAAGAGTTACAATGATTGGTAAAAAAACAGCTGCACAATTAGTGTTAAAGGATGCTCAAAATTACACTGA AGATATGGCTTATAATGCAGTCTGTGATTTGTCCACAATCGAAGTATTGATTAATATGCACAATTCCCATGAAAAAGAAG ATAAAAGTAATTACAACGTAGCTTTAATCACAAAAGATAAAGGCTTGTCCTTATTTTCAGCTTTGCTTTCTAATACAAAA ATTAATGGTAGTGATGGCGATAATCTACAAGTAACGGCAAAGTTAACTTCCTCCATATTTGGTGATGATGAAGATTTGCT GAATACTTATGAAAAGTGGCTAAAAGGAGAGTATTAA
Upstream 100 bases:
>100_bases ACGTTTTGGTCTTGTCACTGTTTTTGCAAAAAGCCGCAAAAACACCGCCAATCCTAAACGCCGTTTATTGCTGGCGTTAT GTTCTTCTGGAGTATATGTA
Downstream 100 bases:
>100_bases GGTTTCTAAATGAATCACACAAACATAACAAAGCACTTAAACGTAACTAAAACAGTGGATTACGTTTCGCTTCGCTCCAC GTTATAACCCACGATTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MNDGVGRNHLGELTINNIVLKSFDIVPNSFTDMQQMNESNKVKVRLFNIQSNIIRNDERIELEMINSVKNETFLVVFGGW IPCAFIKSNTILYADRNVITEITTRYKGGIKKSDKALDYFDSIFLHNKSVSIDISAFVIEANERKIPTNELINQQVASVK ESLKRALPNLKIANYPGGNSYYHDLKDLLEPIMKKRMAFLQEVTPKLNRQFTAKSRKEAVNVVFKAAKKAQLSKNDLVIV LALLRVTMIGKKTAAQLVLKDAQNYTEDMAYNAVCDLSTIEVLINMHNSHEKEDKSNYNVALITKDKGLSLFSALLSNTK INGSDGDNLQVTAKLTSSIFGDDEDLLNTYEKWLKGEY
Sequences:
>Translated_358_residues MNDGVGRNHLGELTINNIVLKSFDIVPNSFTDMQQMNESNKVKVRLFNIQSNIIRNDERIELEMINSVKNETFLVVFGGW IPCAFIKSNTILYADRNVITEITTRYKGGIKKSDKALDYFDSIFLHNKSVSIDISAFVIEANERKIPTNELINQQVASVK ESLKRALPNLKIANYPGGNSYYHDLKDLLEPIMKKRMAFLQEVTPKLNRQFTAKSRKEAVNVVFKAAKKAQLSKNDLVIV LALLRVTMIGKKTAAQLVLKDAQNYTEDMAYNAVCDLSTIEVLINMHNSHEKEDKSNYNVALITKDKGLSLFSALLSNTK INGSDGDNLQVTAKLTSSIFGDDEDLLNTYEKWLKGEY >Mature_358_residues MNDGVGRNHLGELTINNIVLKSFDIVPNSFTDMQQMNESNKVKVRLFNIQSNIIRNDERIELEMINSVKNETFLVVFGGW IPCAFIKSNTILYADRNVITEITTRYKGGIKKSDKALDYFDSIFLHNKSVSIDISAFVIEANERKIPTNELINQQVASVK ESLKRALPNLKIANYPGGNSYYHDLKDLLEPIMKKRMAFLQEVTPKLNRQFTAKSRKEAVNVVFKAAKKAQLSKNDLVIV LALLRVTMIGKKTAAQLVLKDAQNYTEDMAYNAVCDLSTIEVLINMHNSHEKEDKSNYNVALITKDKGLSLFSALLSNTK INGSDGDNLQVTAKLTSSIFGDDEDLLNTYEKWLKGEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40427; Mature: 40427
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS00052 RIBOSOMAL_S7
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDGVGRNHLGELTINNIVLKSFDIVPNSFTDMQQMNESNKVKVRLFNIQSNIIRNDERI CCCCCCCCCCCCEEEHHEEEEEECCCCCCHHHHHHCCCCCCEEEEEEEEHHHHHCCCCHH ELEMINSVKNETFLVVFGGWIPCAFIKSNTILYADRNVITEITTRYKGGIKKSDKALDYF HHHHHHHCCCCEEEEEECCCCCEEEEECCEEEEECCHHHHHHHHHHCCCCCCCHHHHHHH DSIFLHNKSVSIDISAFVIEANERKIPTNELINQQVASVKESLKRALPNLKIANYPGGNS HHHHEECCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC YYHDLKDLLEPIMKKRMAFLQEVTPKLNRQFTAKSRKEAVNVVFKAAKKAQLSKNDLVIV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LALLRVTMIGKKTAAQLVLKDAQNYTEDMAYNAVCDLSTIEVLINMHNSHEKEDKSNYNV HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCE ALITKDKGLSLFSALLSNTKINGSDGDNLQVTAKLTSSIFGDDEDLLNTYEKWLKGEY EEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MNDGVGRNHLGELTINNIVLKSFDIVPNSFTDMQQMNESNKVKVRLFNIQSNIIRNDERI CCCCCCCCCCCCEEEHHEEEEEECCCCCCHHHHHHCCCCCCEEEEEEEEHHHHHCCCCHH ELEMINSVKNETFLVVFGGWIPCAFIKSNTILYADRNVITEITTRYKGGIKKSDKALDYF HHHHHHHCCCCEEEEEECCCCCEEEEECCEEEEECCHHHHHHHHHHCCCCCCCHHHHHHH DSIFLHNKSVSIDISAFVIEANERKIPTNELINQQVASVKESLKRALPNLKIANYPGGNS HHHHEECCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC YYHDLKDLLEPIMKKRMAFLQEVTPKLNRQFTAKSRKEAVNVVFKAAKKAQLSKNDLVIV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LALLRVTMIGKKTAAQLVLKDAQNYTEDMAYNAVCDLSTIEVLINMHNSHEKEDKSNYNV HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCE ALITKDKGLSLFSALLSNTKINGSDGDNLQVTAKLTSSIFGDDEDLLNTYEKWLKGEY EEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA