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The map label for this gene is exeF [H]

Identifier: 119943892

GI number: 119943892

Start: 132936

End: 134126

Strand: Direct

Name: exeF [H]

Synonym: Ping_0099

Alternate gene names: 119943892

Gene position: 132936-134126 (Clockwise)

Preceding gene: 119943891

Following gene: 119943893

Centisome position: 2.92

GC content: 43.58

Gene sequence:

>1191_bases
ATGGATGATCGAGGAAAACTGAAAAAAGGTACTGAAGAAGCTGATTCGGCACGCTTGTTGCGGCACCAGTTACGCACAGC
GGGTTTAACTCCCCTTGAAATTGAAGTTGTTAGCAACGAGTCTCCAAAAAAAGGAGGCAGTCTATTCAGTAAAAAAATAA
AAACCGCTGATTTAGCCTTAATTACGCGTCAATTATCGACTCTGGTTGCATCAGCCATTCCCCTTGAGGAATGTTTGCAC
GCAGTGGCTGAGCAGTGTGATAAACCCAACATAAAGGGCATGATTGTCTCGGTACGGGGCGGAGTGCTTGAAGGAAATAG
CCTGGCAGACAGCATGCGCGCATTTCCATTGATTTTTGATAACCTGTTTTGCTCGATGGTTGCGGCGGGTGAAAAATCAG
GACATCTTGATCAGGTACTGGATCGTTTGGCAGATTACGCAGAGCAACGCGAAGAGATGAAAAGCAAAATGACGCAGGCA
TTGATTTATCCGCTGATATTAACCTTAGTCGCCATTTCTGTTGTGGCTATTTTATTAACCTCAGTGGTGCCGCAAGTGGT
TGGGCAGTTTGAACATATGAGCGCAGATCTACCCGCTTCAACTAAGTTTCTGATCGCCGCCAGCGATGGCTTAAACAGTT
ACGGATTAATTATTGTTATCCTTATTTTTGCTTCACTGTTTATTTTCAAAAGGTTACTTAGAAAACCTGCTAATCAGTTA
TTGTTTGATCAGAAACTGCTTAAATTTCCCGTTGTTGGGCGTGTCGCTAACGAACTGAATACTGCTCGTTTTGCCCGTAC
CTTGAGTATTCTAAATAGCAGTGCCGTGCCCTTATTAGAAGCACTGTCGATAGCCGGAAATGTATTAAGCAACCAATTTA
TACGTCTCAAAGTCAGTGAGGCGACGGAGCGTGTCCGAGAGGGCACAAGTCTAGGGCAAGCCTTAGACAGTACAAAATTG
TTTCCTCCAATGATGTTACATATGATAAAAAGCGGGGAACGCAGTGGAGAAATAGGTAATATGCTTGAACGATCTGCTGA
TAATCAGGACAAACAGTTTGCGGCACAGGTAACCATTGCACTGGGTATTTTTGAACCCGCTTTGGTTATCTCCATGGCGG
GTATCGTTTTATTTATCGTCATGGCAATATTACAACCCATTTTGCAGTTGAATAATATGGTGTCAGGTTAA

Upstream 100 bases:

>100_bases
GATGATGGTCTAGCTAAAGTGTTAGCAGGAGTAACCACATTGGAAGAGGTTCTACGTGTAAGCAGAGAGGATTAACGTGG
CAACATTTTCTTATAAAGCA

Downstream 100 bases:

>100_bases
CGCGCGTATTGCCAAGGTGATAATCGCGTTAACCTGATGTTTGGCAAGTTTAAATTTGAATAACAAAATCTAGGGGCAAG
ATAGTGAAGAGAAACAAAAA

Product: general secretion pathway protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MDDRGKLKKGTEEADSARLLRHQLRTAGLTPLEIEVVSNESPKKGGSLFSKKIKTADLALITRQLSTLVASAIPLEECLH
AVAEQCDKPNIKGMIVSVRGGVLEGNSLADSMRAFPLIFDNLFCSMVAAGEKSGHLDQVLDRLADYAEQREEMKSKMTQA
LIYPLILTLVAISVVAILLTSVVPQVVGQFEHMSADLPASTKFLIAASDGLNSYGLIIVILIFASLFIFKRLLRKPANQL
LFDQKLLKFPVVGRVANELNTARFARTLSILNSSAVPLLEALSIAGNVLSNQFIRLKVSEATERVREGTSLGQALDSTKL
FPPMMLHMIKSGERSGEIGNMLERSADNQDKQFAAQVTIALGIFEPALVISMAGIVLFIVMAILQPILQLNNMVSG

Sequences:

>Translated_396_residues
MDDRGKLKKGTEEADSARLLRHQLRTAGLTPLEIEVVSNESPKKGGSLFSKKIKTADLALITRQLSTLVASAIPLEECLH
AVAEQCDKPNIKGMIVSVRGGVLEGNSLADSMRAFPLIFDNLFCSMVAAGEKSGHLDQVLDRLADYAEQREEMKSKMTQA
LIYPLILTLVAISVVAILLTSVVPQVVGQFEHMSADLPASTKFLIAASDGLNSYGLIIVILIFASLFIFKRLLRKPANQL
LFDQKLLKFPVVGRVANELNTARFARTLSILNSSAVPLLEALSIAGNVLSNQFIRLKVSEATERVREGTSLGQALDSTKL
FPPMMLHMIKSGERSGEIGNMLERSADNQDKQFAAQVTIALGIFEPALVISMAGIVLFIVMAILQPILQLNNMVSG
>Mature_396_residues
MDDRGKLKKGTEEADSARLLRHQLRTAGLTPLEIEVVSNESPKKGGSLFSKKIKTADLALITRQLSTLVASAIPLEECLH
AVAEQCDKPNIKGMIVSVRGGVLEGNSLADSMRAFPLIFDNLFCSMVAAGEKSGHLDQVLDRLADYAEQREEMKSKMTQA
LIYPLILTLVAISVVAILLTSVVPQVVGQFEHMSADLPASTKFLIAASDGLNSYGLIIVILIFASLFIFKRLLRKPANQL
LFDQKLLKFPVVGRVANELNTARFARTLSILNSSAVPLLEALSIAGNVLSNQFIRLKVSEATERVREGTSLGQALDSTKL
FPPMMLHMIKSGERSGEIGNMLERSADNQDKQFAAQVTIALGIFEPALVISMAGIVLFIVMAILQPILQLNNMVSG

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=397, Percent_Identity=42.8211586901763, Blast_Score=324, Evalue=8e-90,
Organism=Escherichia coli, GI1786295, Length=392, Percent_Identity=24.4897959183673, Blast_Score=124, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR011850
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 43026; Mature: 43026

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDRGKLKKGTEEADSARLLRHQLRTAGLTPLEIEVVSNESPKKGGSLFSKKIKTADLAL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH
ITRQLSTLVASAIPLEECLHAVAEQCDKPNIKGMIVSVRGGVLEGNSLADSMRAFPLIFD
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEECCCHHHHHHHHHHHHHH
NLFCSMVAAGEKSGHLDQVLDRLADYAEQREEMKSKMTQALIYPLILTLVAISVVAILLT
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVVPQVVGQFEHMSADLPASTKFLIAASDGLNSYGLIIVILIFASLFIFKRLLRKPANQL
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFDQKLLKFPVVGRVANELNTARFARTLSILNSSAVPLLEALSIAGNVLSNQFIRLKVSE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEHHH
ATERVREGTSLGQALDSTKLFPPMMLHMIKSGERSGEIGNMLERSADNQDKQFAAQVTIA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
LGIFEPALVISMAGIVLFIVMAILQPILQLNNMVSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDDRGKLKKGTEEADSARLLRHQLRTAGLTPLEIEVVSNESPKKGGSLFSKKIKTADLAL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH
ITRQLSTLVASAIPLEECLHAVAEQCDKPNIKGMIVSVRGGVLEGNSLADSMRAFPLIFD
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEECCCHHHHHHHHHHHHHH
NLFCSMVAAGEKSGHLDQVLDRLADYAEQREEMKSKMTQALIYPLILTLVAISVVAILLT
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVVPQVVGQFEHMSADLPASTKFLIAASDGLNSYGLIIVILIFASLFIFKRLLRKPANQL
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFDQKLLKFPVVGRVANELNTARFARTLSILNSSAVPLLEALSIAGNVLSNQFIRLKVSE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEHHH
ATERVREGTSLGQALDSTKLFPPMMLHMIKSGERSGEIGNMLERSADNQDKQFAAQVTIA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
LGIFEPALVISMAGIVLFIVMAILQPILQLNNMVSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1640836 [H]