| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is mtlR [H]
Identifier: 119943883
GI number: 119943883
Start: 121396
End: 121935
Strand: Direct
Name: mtlR [H]
Synonym: Ping_0090
Alternate gene names: 119943883
Gene position: 121396-121935 (Clockwise)
Preceding gene: 119943882
Following gene: 119943885
Centisome position: 2.66
GC content: 36.11
Gene sequence:
>540_bases ATGACAAAATTTGCCCGTTTAAAATTTGATATTGATATTGTAGAAACGCTTTCTGAAGCAGAAACACCCTATGATTTTTT TACCGCCAGTTTTGATCTTTTTGAAGATGCTGTTGATATCTTAATTCAAAATGTTTTTAGAAAAGATGATTATGCAGTGA AATATGCTGTTGAACCCTTATTAAGCCGTGATGGTCCGTTGGCTCATTTACCTGTTCGTATCAAACTGTTATACGGATTG GGGCTGTTATCTCAGGGCTCCTATCAGGATATTGAGAAGTTTATTGGGTTAAAAGAATTTGTTCAGTCAGAAGGTGAATC AATAGAGTTTCTTTCACTTGCTCTCATTGAACGTTTAAATGCTATTCGTGCGGTGGCTAAAATACTGCCTCCCAACTTAG GTGATAATCAATTAGAAGAAAGCTCTCATTATATAGTGCAAATGAAACTGGAGCAGAATAGACAGGTCATTAAGTCCTCA TTGATTCTGGCAATCACTGAAATCATCAAAGAACTGCATAGAGATACTCCCTTAAGCTAA
Upstream 100 bases:
>100_bases TGAAACTGTTAAACTGGTCGAACAAGCTTACCAAAGCCTAAAATGATGACTCAATTCCAGTGCCGCTTTTGCGGCACTTA TTTATTTTATTAGAAAAATT
Downstream 100 bases:
>100_bases ATATCTTATATTGACCCAAATAATTTTAGACAGGGCAAAGAAAGCCTCTGTTGTTAGTGCTCATTAATACTCTAATCCCT TGATTATTTTAATGAAGTGA
Product: mannitol repressor protein
Products: NA
Alternate protein names: Mannitol repressor protein [H]
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTKFARLKFDIDIVETLSEAETPYDFFTASFDLFEDAVDILIQNVFRKDDYAVKYAVEPLLSRDGPLAHLPVRIKLLYGL GLLSQGSYQDIEKFIGLKEFVQSEGESIEFLSLALIERLNAIRAVAKILPPNLGDNQLEESSHYIVQMKLEQNRQVIKSS LILAITEIIKELHRDTPLS
Sequences:
>Translated_179_residues MTKFARLKFDIDIVETLSEAETPYDFFTASFDLFEDAVDILIQNVFRKDDYAVKYAVEPLLSRDGPLAHLPVRIKLLYGL GLLSQGSYQDIEKFIGLKEFVQSEGESIEFLSLALIERLNAIRAVAKILPPNLGDNQLEESSHYIVQMKLEQNRQVIKSS LILAITEIIKELHRDTPLS >Mature_178_residues TKFARLKFDIDIVETLSEAETPYDFFTASFDLFEDAVDILIQNVFRKDDYAVKYAVEPLLSRDGPLAHLPVRIKLLYGLG LLSQGSYQDIEKFIGLKEFVQSEGESIEFLSLALIERLNAIRAVAKILPPNLGDNQLEESSHYIVQMKLEQNRQVIKSSL ILAITEIIKELHRDTPLS
Specific function: Acts as a repressor of the mtlAD operon [H]
COG id: COG3722
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yggD [H]
Homologues:
Organism=Escherichia coli, GI1790029, Length=164, Percent_Identity=35.9756097560976, Blast_Score=119, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007761 [H]
Pfam domain/function: PF05068 MtlR [H]
EC number: NA
Molecular weight: Translated: 20373; Mature: 20242
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFARLKFDIDIVETLSEAETPYDFFTASFDLFEDAVDILIQNVFRKDDYAVKYAVEPL CCCCHHEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LSRDGPLAHLPVRIKLLYGLGLLSQGSYQDIEKFIGLKEFVQSEGESIEFLSLALIERLN HCCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AIRAVAKILPPNLGDNQLEESSHYIVQMKLEQNRQVIKSSLILAITEIIKELHRDTPLS HHHHHHHHCCCCCCCCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TKFARLKFDIDIVETLSEAETPYDFFTASFDLFEDAVDILIQNVFRKDDYAVKYAVEPL CCCHHEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LSRDGPLAHLPVRIKLLYGLGLLSQGSYQDIEKFIGLKEFVQSEGESIEFLSLALIERLN HCCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AIRAVAKILPPNLGDNQLEESSHYIVQMKLEQNRQVIKSSLILAITEIIKELHRDTPLS HHHHHHHHCCCCCCCCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]