| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is metJ [H]
Identifier: 119943853
GI number: 119943853
Start: 80966
End: 81256
Strand: Reverse
Name: metJ [H]
Synonym: Ping_0060
Alternate gene names: 119943853
Gene position: 81256-80966 (Counterclockwise)
Preceding gene: 229358030
Following gene: 119943849
Centisome position: 1.78
GC content: 41.58
Gene sequence:
>291_bases ATGTCGACGAAATGGAATGGTGAATATATCAGCCCTTATGCTGAACACGGTAAAAAAAGTGAGCAAGTAAAAAAAATAAC AGTCTCTATCCCCACGAAAGTCCTTAAAATATTGACCGACGAGCGCACCCGTCGTCAAGTAAATAACTTGCGCCATGCCA CTAACAGTGAGTTATTATGTGAAGCATTCTTACATGCGTACACTGGACAACCGCTGCCGGAAGATGGGGACCTTGATAAA AATCAAGCCACAGGCATTCCGGAAAGCGTTAAAAAGTTAATGAAAAAATAG
Upstream 100 bases:
>100_bases AAGAAAATGAGCCATAGACATCTAGCCCTCTTTACGTATAGATTGCCAAAATAAGCAACAAAAGGTAAAATAACCTTTCT AGTTTTATGGGGTAATAAAG
Downstream 100 bases:
>100_bases AAAATTAAACTGTGCAGATGATCAGCCTGCAATTCACTGCTTCTACGCAGTTTAACGCTTTATTTATGATTAACTTTGTT GCAGCTGCCTGTATAAAAAT
Product: transcriptional repressor protein MetJ
Products: NA
Alternate protein names: Met regulon regulatory protein metJ [H]
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSTKWNGEYISPYAEHGKKSEQVKKITVSIPTKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAYTGQPLPEDGDLDK NQATGIPESVKKLMKK
Sequences:
>Translated_96_residues MSTKWNGEYISPYAEHGKKSEQVKKITVSIPTKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAYTGQPLPEDGDLDK NQATGIPESVKKLMKK >Mature_95_residues STKWNGEYISPYAEHGKKSEQVKKITVSIPTKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAYTGQPLPEDGDLDKN QATGIPESVKKLMKK
Specific function: This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis [H]
COG id: COG3060
COG function: function code KE; Transcriptional regulator of met regulon
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metJ family [H]
Homologues:
Organism=Escherichia coli, GI1790373, Length=94, Percent_Identity=79.7872340425532, Blast_Score=163, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002084 - InterPro: IPR010985 - ProDom: PD020365 [H]
Pfam domain/function: PF01340 MetJ [H]
EC number: NA
Molecular weight: Translated: 10895; Mature: 10763
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKWNGEYISPYAEHGKKSEQVKKITVSIPTKVLKILTDERTRRQVNNLRHATNSELLC CCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHH EAFLHAYTGQPLPEDGDLDKNQATGIPESVKKLMKK HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure STKWNGEYISPYAEHGKKSEQVKKITVSIPTKVLKILTDERTRRQVNNLRHATNSELLC CCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHH EAFLHAYTGQPLPEDGDLDKNQATGIPESVKKLMKK HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]