| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is tauA [H]
Identifier: 119943840
GI number: 119943840
Start: 68054
End: 69061
Strand: Direct
Name: tauA [H]
Synonym: Ping_0047
Alternate gene names: 119943840
Gene position: 68054-69061 (Clockwise)
Preceding gene: 119943837
Following gene: 119943841
Centisome position: 1.49
GC content: 40.67
Gene sequence:
>1008_bases ATGAAAAAATGTAAACCACTCAAAATAATGGCCGCAATGGCTGGACTATTTTTTGCTTCAACGTTAGCGGCAAAAGATGT CACTATCGGTTACATGGGGATGAATAACCCTTGGAAGCATGCGATTAACGAAAAGTTAATTGAGAAAGAAACGGGTTACA AGGTTGATTGGAGACGTTTTTACTCAGGATCAAAAGTGATCACTGCGATGGCATCAGGATCAATTGATATTGCTTCTGCG GGGTCTAGCCCAATTGCTGCGGCAGTAAGTCATGGTATCGAGATTGAATTAGTTTGGATTCTAGAAAACATTGCCGATGC AGAAGCGCTTGTTGTACGTAATGGTGCAGGGATCACCTCTCCATCAGATTTAAAAGGCAAGCGTATTGCGGTCCCTTTTG TATCAACCACTCACTTCCATACTTTGTTTGCTTTAGAGCAGTTTGGGCTGTCTGATGAAGACGTTAGATTAATCAATATG CAACCAAATACCATTGGTGCAGCATGGGAACGTGGTGATATTGACGGCGCGTTTATCTGGGATCCTGTACTGGGTAAAAT CAAAAAAGACGGTAAAGTTTTAATCACTTCAAGAACCTTAAGTTCTTGGGGTAAGCCAACCTTTGATGGTTTGGTTGTCG ATAAAAAATTCGGTAAAGAAAATGCAGATTTTATGGCTAAAGTACTGAAAATTGCCGCTGATCTTGACCAAGAGTACCGT AGTAATAAAGAGTCTTTTGATGCCACTCACCCAATTGCTAAATCAATTTCAAAAATTTCGGGTAGTGACGTTAACGACGT CGCCGGTGTGTTAGACCTATATGAATTCCCTGACTTTGCTACGCAACTATCATGCAACTGGCTTGGTTGTGGTATGGAAG GTGGTGCTGCTAAGTCACTTAAGTCAACGTCAGAGTTCCTGAAAAAAGGAAAGAAAATAAATGATTTAATGCCAGATTAC AGTGTTTTTGTTAATCCTGAATACGCGCTTGCAGCCTCTAAATTATAA
Upstream 100 bases:
>100_bases AATTTAATAAACTGGTTCTATACCTTATTTTTAGCAGCACGTAGTTTAATTAGGGAGAGCAACGTCGCATCAAAAAATCA GATCACTAAGGAACTTTAAG
Downstream 100 bases:
>100_bases GTGCGGTATTAACTTCAATCTATCTATTTAGGAGCGTTGTAATGAACACATTAAAAATTTGTGATGTATCTGTTGTTTAT CCGGGCTCAGAAGGCGGGGA
Product: taurine ABC transporter, periplasmic binding protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: Sulfate starvation-induced protein 1; SSI1 [H]
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MKKCKPLKIMAAMAGLFFASTLAAKDVTIGYMGMNNPWKHAINEKLIEKETGYKVDWRRFYSGSKVITAMASGSIDIASA GSSPIAAAVSHGIEIELVWILENIADAEALVVRNGAGITSPSDLKGKRIAVPFVSTTHFHTLFALEQFGLSDEDVRLINM QPNTIGAAWERGDIDGAFIWDPVLGKIKKDGKVLITSRTLSSWGKPTFDGLVVDKKFGKENADFMAKVLKIAADLDQEYR SNKESFDATHPIAKSISKISGSDVNDVAGVLDLYEFPDFATQLSCNWLGCGMEGGAAKSLKSTSEFLKKGKKINDLMPDY SVFVNPEYALAASKL
Sequences:
>Translated_335_residues MKKCKPLKIMAAMAGLFFASTLAAKDVTIGYMGMNNPWKHAINEKLIEKETGYKVDWRRFYSGSKVITAMASGSIDIASA GSSPIAAAVSHGIEIELVWILENIADAEALVVRNGAGITSPSDLKGKRIAVPFVSTTHFHTLFALEQFGLSDEDVRLINM QPNTIGAAWERGDIDGAFIWDPVLGKIKKDGKVLITSRTLSSWGKPTFDGLVVDKKFGKENADFMAKVLKIAADLDQEYR SNKESFDATHPIAKSISKISGSDVNDVAGVLDLYEFPDFATQLSCNWLGCGMEGGAAKSLKSTSEFLKKGKKINDLMPDY SVFVNPEYALAASKL >Mature_335_residues MKKCKPLKIMAAMAGLFFASTLAAKDVTIGYMGMNNPWKHAINEKLIEKETGYKVDWRRFYSGSKVITAMASGSIDIASA GSSPIAAAVSHGIEIELVWILENIADAEALVVRNGAGITSPSDLKGKRIAVPFVSTTHFHTLFALEQFGLSDEDVRLINM QPNTIGAAWERGDIDGAFIWDPVLGKIKKDGKVLITSRTLSSWGKPTFDGLVVDKKFGKENADFMAKVLKIAADLDQEYR SNKESFDATHPIAKSISKISGSDVNDVAGVLDLYEFPDFATQLSCNWLGCGMEGGAAKSLKSTSEFLKKGKKINDLMPDY SVFVNPEYALAASKL
Specific function: Part of a binding-protein-dependent transport system for taurine [H]
COG id: COG4521
COG function: function code P; ABC-type taurine transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=322, Percent_Identity=36.9565217391304, Blast_Score=213, Evalue=1e-56, Organism=Escherichia coli, GI87081803, Length=249, Percent_Identity=28.9156626506024, Blast_Score=86, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 - InterPro: IPR001638 - InterPro: IPR010068 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 36401; Mature: 36401
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKCKPLKIMAAMAGLFFASTLAAKDVTIGYMGMNNPWKHAINEKLIEKETGYKVDWRRF CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEHHHH YSGSKVITAMASGSIDIASAGSSPIAAAVSHGIEIELVWILENIADAEALVVRNGAGITS HCCCEEEEEEECCCEEEECCCCCCHHHHHHCCCEEEEEEEEHHHCCCEEEEEECCCCCCC PSDLKGKRIAVPFVSTTHFHTLFALEQFGLSDEDVRLINMQPNTIGAAWERGDIDGAFIW CCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE DPVLGKIKKDGKVLITSRTLSSWGKPTFDGLVVDKKFGKENADFMAKVLKIAADLDQEYR CHHHHHHCCCCEEEEEECCHHHCCCCCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHH SNKESFDATHPIAKSISKISGSDVNDVAGVLDLYEFPDFATQLSCNWLGCGMEGGAAKSL CCCHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHEEECCEEECCCCCCCHHHH KSTSEFLKKGKKINDLMPDYSVFVNPEYALAASKL HHHHHHHHCCCHHHHCCCCCEEEECCCHHHHCCCC >Mature Secondary Structure MKKCKPLKIMAAMAGLFFASTLAAKDVTIGYMGMNNPWKHAINEKLIEKETGYKVDWRRF CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEHHHH YSGSKVITAMASGSIDIASAGSSPIAAAVSHGIEIELVWILENIADAEALVVRNGAGITS HCCCEEEEEEECCCEEEECCCCCCHHHHHHCCCEEEEEEEEHHHCCCEEEEEECCCCCCC PSDLKGKRIAVPFVSTTHFHTLFALEQFGLSDEDVRLINMQPNTIGAAWERGDIDGAFIW CCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE DPVLGKIKKDGKVLITSRTLSSWGKPTFDGLVVDKKFGKENADFMAKVLKIAADLDQEYR CHHHHHHCCCCEEEEEECCHHHCCCCCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHH SNKESFDATHPIAKSISKISGSDVNDVAGVLDLYEFPDFATQLSCNWLGCGMEGGAAKSL CCCHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHEEECCEEECCCCCCCHHHH KSTSEFLKKGKKINDLMPDYSVFVNPEYALAASKL HHHHHHHHCCCHHHHCCCCCEEEECCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 8774726 [H]