Click here to switch to the map view.

The map label for this gene is 119943831

Identifier: 119943831

GI number: 119943831

Start: 55201

End: 56406

Strand: Reverse

Name: 119943831

Synonym: Ping_0037

Alternate gene names: NA

Gene position: 56406-55201 (Counterclockwise)

Preceding gene: 119943832

Following gene: 119943804

Centisome position: 1.24

GC content: 36.82

Gene sequence:

>1206_bases
ATGAATAAATTTACAAAGCTTTTATTTACAGTTTTTTGTGTGTTTTTATTTGGCTGCAACTCGGAAGACTCTATAAAATC
TATTTTTAAAGAAGATAGCCCAAAATTCCAAACTGAAATAAAAAAGACAGATAAAACGAAAGACTCTTTTAGTCCGGAAC
AGAAATTGGGTGGCGGAAAGTATAAAATAGCTGTCATACAGAGTGATGACTATCCTGAATATTATGAAGTACTGACCGCA
ATACTCCAAGGGATGCAGCTTACAGGCTGGATAAAAGAAAATAATGTCGTTGTCAAAGATAACTACACTTCCAACAGAGA
GCTTATTAACGGGATAAATGGGAAAGACTATAGTGACTATGTAGAATTCTCTCCGGACACGTTTTTTAGTTTTCGAGCAG
ATGAAAATAATGCATCAGATCCGCAGTTTAAAAAAGTAATGCAAAGAGCAATAGACGGAGAATTTGATGCAGTTATTTTA
TTGGGGACACTTGCAAGTCATAAGGTGCTTGAGAACAAGGAATACAGCACCGCAACTTTAATGGATGCAGTGTCTGATCC
TATTGGTTCTGGGTTTGTTGAATCAATAGATAACTCAGGAAAAGATTTCTTAACCGCTAGAATTGATCCCAATCAGTATA
TCAGACAGGTAAGGCTATTTTATAAAGTGATCGGATTTAAAAGCTTGGGAATAATATATGAAAATAGTGAAAACGGCAGA
TGGTATGCCGCTGTGGATGATGTGGAAAAAGTAGCAGAAGAGAATGGTATAAAGCTAGTAGTAGATAACGATGTAATGAC
TGAACCTACACAACAACAGTACCATCAAGCATACGGCATGTACCTGAGAGCAATGGACAGAGTATCTCCAAAAGTTGAAG
CCATGTTTCTTGGAATATCTGGCGGACTAGAACCTGAAAACCTTCCCAATGTTGTAAATAAGCTGATTGATTACAAGCTG
CCTTCTTTTACTATGGAAGGGGCTCAGGCTGTAAAAAAAGGTGTAATGATAGGAGTGTCCGGGAAAGAAACTGGCCTTTA
CAATGCAAAAAAACTTGCACGTATTTTAAAGGGGGAAACACCGAGTACTTTAGATCAGAGGTATGAAAAAATGCCTAAAA
TTTCCATAAACCTTAAAACAACAGAGAAAATAGGATATGACCTGCCTGTTGATATTATAAGAAGTGCAGATGAAATATAC
CAGTGA

Upstream 100 bases:

>100_bases
CGGAAAATAGAGTCTAGCCTTTTACATCAGAAGATAAGCAAGTGAGAAACACGGTTTCTCACAGAACGCAGAAAACGTCA
AAGCAAAGAGAGAAAATAAA

Downstream 100 bases:

>100_bases
TCTTCGAAAATACTTGATGTCTTAAGCCCTCATAATTCATGAAATGCTGTTCATCACTCTATTCATGATGACCAGCATTT
CTAAAAAATTGAGTCCTAGA

Product: ABC-type uncharacterized transport system, periplasmic component

Products: NA

Alternate protein names: ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MNKFTKLLFTVFCVFLFGCNSEDSIKSIFKEDSPKFQTEIKKTDKTKDSFSPEQKLGGGKYKIAVIQSDDYPEYYEVLTA
ILQGMQLTGWIKENNVVVKDNYTSNRELINGINGKDYSDYVEFSPDTFFSFRADENNASDPQFKKVMQRAIDGEFDAVIL
LGTLASHKVLENKEYSTATLMDAVSDPIGSGFVESIDNSGKDFLTARIDPNQYIRQVRLFYKVIGFKSLGIIYENSENGR
WYAAVDDVEKVAEENGIKLVVDNDVMTEPTQQQYHQAYGMYLRAMDRVSPKVEAMFLGISGGLEPENLPNVVNKLIDYKL
PSFTMEGAQAVKKGVMIGVSGKETGLYNAKKLARILKGETPSTLDQRYEKMPKISINLKTTEKIGYDLPVDIIRSADEIY
Q

Sequences:

>Translated_401_residues
MNKFTKLLFTVFCVFLFGCNSEDSIKSIFKEDSPKFQTEIKKTDKTKDSFSPEQKLGGGKYKIAVIQSDDYPEYYEVLTA
ILQGMQLTGWIKENNVVVKDNYTSNRELINGINGKDYSDYVEFSPDTFFSFRADENNASDPQFKKVMQRAIDGEFDAVIL
LGTLASHKVLENKEYSTATLMDAVSDPIGSGFVESIDNSGKDFLTARIDPNQYIRQVRLFYKVIGFKSLGIIYENSENGR
WYAAVDDVEKVAEENGIKLVVDNDVMTEPTQQQYHQAYGMYLRAMDRVSPKVEAMFLGISGGLEPENLPNVVNKLIDYKL
PSFTMEGAQAVKKGVMIGVSGKETGLYNAKKLARILKGETPSTLDQRYEKMPKISINLKTTEKIGYDLPVDIIRSADEIY
Q
>Mature_401_residues
MNKFTKLLFTVFCVFLFGCNSEDSIKSIFKEDSPKFQTEIKKTDKTKDSFSPEQKLGGGKYKIAVIQSDDYPEYYEVLTA
ILQGMQLTGWIKENNVVVKDNYTSNRELINGINGKDYSDYVEFSPDTFFSFRADENNASDPQFKKVMQRAIDGEFDAVIL
LGTLASHKVLENKEYSTATLMDAVSDPIGSGFVESIDNSGKDFLTARIDPNQYIRQVRLFYKVIGFKSLGIIYENSENGR
WYAAVDDVEKVAEENGIKLVVDNDVMTEPTQQQYHQAYGMYLRAMDRVSPKVEAMFLGISGGLEPENLPNVVNKLIDYKL
PSFTMEGAQAVKKGVMIGVSGKETGLYNAKKLARILKGETPSTLDQRYEKMPKISINLKTTEKIGYDLPVDIIRSADEIY
Q

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45240; Mature: 45240

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFTKLLFTVFCVFLFGCNSEDSIKSIFKEDSPKFQTEIKKTDKTKDSFSPEQKLGGGK
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHCCCCE
YKIAVIQSDDYPEYYEVLTAILQGMQLTGWIKENNVVVKDNYTSNRELINGINGKDYSDY
EEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCEEEECCCCCCHHHHCCCCCCCCCCC
VEFSPDTFFSFRADENNASDPQFKKVMQRAIDGEFDAVILLGTLASHKVLENKEYSTATL
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCCHHHHH
MDAVSDPIGSGFVESIDNSGKDFLTARIDPNQYIRQVRLFYKVIGFKSLGIIYENSENGR
HHHHHCCCCCHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHEEEEEECCCCCE
WYAAVDDVEKVAEENGIKLVVDNDVMTEPTQQQYHQAYGMYLRAMDRVSPKVEAMFLGIS
EEEEHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
GGLEPENLPNVVNKLIDYKLPSFTMEGAQAVKKGVMIGVSGKETGLYNAKKLARILKGET
CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHCCCC
PSTLDQRYEKMPKISINLKTTEKIGYDLPVDIIRSADEIYQ
CCHHHHHHHHCCCEEEEEEEHHHCCCCCCHHHHHCHHHHCC
>Mature Secondary Structure
MNKFTKLLFTVFCVFLFGCNSEDSIKSIFKEDSPKFQTEIKKTDKTKDSFSPEQKLGGGK
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHCCCCE
YKIAVIQSDDYPEYYEVLTAILQGMQLTGWIKENNVVVKDNYTSNRELINGINGKDYSDY
EEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCEEEECCCCCCHHHHCCCCCCCCCCC
VEFSPDTFFSFRADENNASDPQFKKVMQRAIDGEFDAVILLGTLASHKVLENKEYSTATL
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCCHHHHH
MDAVSDPIGSGFVESIDNSGKDFLTARIDPNQYIRQVRLFYKVIGFKSLGIIYENSENGR
HHHHHCCCCCHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHEEEEEECCCCCE
WYAAVDDVEKVAEENGIKLVVDNDVMTEPTQQQYHQAYGMYLRAMDRVSPKVEAMFLGIS
EEEEHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
GGLEPENLPNVVNKLIDYKLPSFTMEGAQAVKKGVMIGVSGKETGLYNAKKLARILKGET
CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHCCCC
PSTLDQRYEKMPKISINLKTTEKIGYDLPVDIIRSADEIYQ
CCHHHHHHHHCCCEEEEEEEHHHCCCCCCHHHHHCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA