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The map label for this gene is yjcF [C]

Identifier: 119943818

GI number: 119943818

Start: 34893

End: 37742

Strand: Direct

Name: yjcF [C]

Synonym: Ping_0024

Alternate gene names: 119943818

Gene position: 34893-37742 (Clockwise)

Preceding gene: 119943817

Following gene: 119943819

Centisome position: 0.77

GC content: 41.19

Gene sequence:

>2850_bases
GTGAATATAATTAAACCCCTGCAACTTGCCGTACTGCATAAATCCTTTTCTTATTTAGAAAAGGATATTTTTGCGGTGTC
CATTCCTATTGCTTTTTCCTTAACGGACGGCGAAATTTTACTTGAGCAAAAACTATGGGAAAGCGTAGGTGAACAAATCG
GCAATAATATTTTTGATGCCGCCATGCCCAAAGCCTGTGCTGAAGTACTGGTTGCCGGTGATTTTATTGCGCCAAATAAT
AAAGCCGTCGCTGCCGGCTTGGTGCATTTGCAAGTGTCTCGTCAAGACCAGCGTGGCCAATGGCAAGACTTAGTGGATAA
AGAGCTGCTGGTTTTTGGCGATCGAAACTGGTACAAACAATTAGGCGCGGGTCTTGCCAGCAGCTCCGCTGAGCTTATAA
CTACTATGACCATAAGCTATCAAAATGCTTATGGTGGTGAAGGTTATCAATTAAACCCCGAAGGAAAAGGCTTTAAACCG
GTACAGACAGATACGGGTGAAAAGCAATTTTTACCCAACATTGAATATAAAAATCAATTGTTAACCTCATCGTCACAACA
AGTGCCGCCTGCCAGTTTTGGCCGGGTTGATATGATGTGGCCGCAACGTTTATCCCTTGCCGGCACCTACGATCAGGCTT
ATCTTGATAACCAAATGCCGGGCCTCGCGAATGATATCGATTGGTTATATTTTAACGATGCCGCTAAAGATCAGTGGCTT
GATGGTTTTTTTCAAGGTGACGAGCAGTATTTTATTAGCAATATGCATGCTGAGCATGCAGTGCTTAAAGGGCAATTACC
GCCCATTTACGGCCGTGCCTTTGTAAATCAAAACGTGCCGCTAAAAGATAATAACCAGCAAATGACCGGGGAATACCAAA
ATGAGTTTAAAGAAATAAAAACTAAATTGGACACGCTGTGGTTATTTCCTAATGCCAATATGGGGGTGATGATCTATCGC
GGTACTATTAAAGGTTATAGCGATGACGGCTGTGATATTACGGCGTTATTATTAGCTTGTGAAAACCGCAATGATACGCC
TCGTCATTTACAGCATTATCAGGATCAACTCACTAAAAGGTTAGATCCTGATCACGGTTATAAATATATGCTGTTTTCAT
CCCCATTGATTGCCGAGGGCATGCGTTGTGGTTTTAAACAACTGCAGGATGATTTTGATTTCCCATTAGAAATGCTTGGT
AAAGCCAATATGGATGAATTTGCTGATACTAAAAAAGCCGAGGCTATGTTGCAAGTCGACGATGCCAAGCTGCAAATTAT
TGAGCAATGTAAGGCCGCAGGCGTGGACCCAACACCCTATTTAGATAAAATTAACAACCCTGAAAAAGCCCCTGAGCAGT
TAAAAATAGAAGCCTTAATGGAAAAAATGGCACCGGGTATAGTGACCGATCCGGAAAATATCGATATTTTTAATATTGAT
TTATCGGTGATGGATGAAATTAAAGCTTATACCGATGAAATGGCCGCGCAAAAAACAGCCGAAGCAAAAGCGCAAATCAA
AGTGGAAGTCGAAAAATTAAAAAGTATGCCCGATGTCCATTTATTTGCTGATGCAATTGCAAAAATGGAAAATGCGATAA
ATGAAATAGATTTACCTCCAATGTGGCCACGTCCTGATATAAAAGGGCAATTGGTTGAAGTCAAAAAGCAAGTGGCAGAG
ACAGAAAAAAAAATAGCGGATCTTAGAGCGCAAGGCGTGTCTGAGGAACAGTTACCAAAAATAGATATTAATATTGAAAA
GATAGAAAAACAATTGTTAGATGCTGAAGTTAAGTTAAAAGAAACCTATGCGATGGGCGCGCACTTAATGCCAACAAGCC
GTTCACCGCACCCCGGGCAGGAAGCGCAAATCAAAGCGGATTTTTTACAAAAGTGGCGCACCGGGCAAGCGCTGACCAAT
GGCGATTATGCTTGTATTGATTTAAGCGGTGAAAACTTAGTGGGCATTGATTTAAGCGGCTGTTATCTTGAGGGCGTGAA
CTTTAGCCATTGTGATTTAAGCAATGCTAACTTAGAAAAATCCATATTGGCAGGGGCGAATTTAAGCAATGCGAAGCTGA
TTAATGCCAATTGCCAGGGGGCCAATATTGGCGCGGCTAATTTAAGCGATGCTGATTTTAGCGAAGCTAACTTAAGCAAA
GCACAACTGGGCGGATCAAATTTCACCCGGACTCAACTGCTGCGCTGTGAAATGCCTGAAATTAACTTTTTAGATACCAC
CTTTGAACAGACCGTTTTTAATGGTGCGGTGCTTAAACAATGTAATTTTATTAACCCCATCTTTAATAACTGTGAGTTTA
TCGGCACTGATTTAACTCAAGTTAATATGGTAAAGCCGGTATTAGTGCAGGCCAATTTTAGCCAGGCGACCCTTGATGGC
GCAAATTTTGTTGAAGCGCAAGCCAGTGAAAGTGATTTTAGCCAGGCTCAAATGATCAATAGCCGTTTTGTGGGTGGCTG
TATATTAAATAACAGTAATTTTAGTCAGGTGAACTTAAGCAAGTCATGTTTACGTGAAAACCAGTTAAACCACTGTGACT
TCTCTCATGCACAATTAGCGGAAGCCGATTTTAGTGGCGCAGAGCTGGCTGATAGTCAGTTTGTAGGGGCCAAAGCTCAC
CGGACACAATTTATGAAATCACAATGTCAAAATGCTGATATGCGCGAGCTGAATTTAATGGAAGGTTCGTTATATAAAGC
CTATTTAGTGGGAGTGACGTTTGATCGAGCCAACTTATACTGCGTTAATTTTATTGATAGTACATTAGGTAATAATAGTT
ATAAAGACGCTAATCTTGATCAAACTATTTTAAAAAATTGGCGGCCATAA

Upstream 100 bases:

>100_bases
GTAAACACTGTTGTTACTAAAGCTAATGAAGTTGACTTTACGATGATAAAGTTATCATCGGGCGCAGTGAACATGCTGAA
TTAATTGAAGATATAAAAAA

Downstream 100 bases:

>100_bases
ATGTTAAAAGATGAGTTAATAAAAGCTGTAAAAGGGGGCGAGCCCCTGATTCAAGGCAGCGATTTATCGGGTGGTGACTA
CCAAGGCGCTGATTTAGGTG

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 949; Mature: 949

Protein sequence:

>949_residues
MNIIKPLQLAVLHKSFSYLEKDIFAVSIPIAFSLTDGEILLEQKLWESVGEQIGNNIFDAAMPKACAEVLVAGDFIAPNN
KAVAAGLVHLQVSRQDQRGQWQDLVDKELLVFGDRNWYKQLGAGLASSSAELITTMTISYQNAYGGEGYQLNPEGKGFKP
VQTDTGEKQFLPNIEYKNQLLTSSSQQVPPASFGRVDMMWPQRLSLAGTYDQAYLDNQMPGLANDIDWLYFNDAAKDQWL
DGFFQGDEQYFISNMHAEHAVLKGQLPPIYGRAFVNQNVPLKDNNQQMTGEYQNEFKEIKTKLDTLWLFPNANMGVMIYR
GTIKGYSDDGCDITALLLACENRNDTPRHLQHYQDQLTKRLDPDHGYKYMLFSSPLIAEGMRCGFKQLQDDFDFPLEMLG
KANMDEFADTKKAEAMLQVDDAKLQIIEQCKAAGVDPTPYLDKINNPEKAPEQLKIEALMEKMAPGIVTDPENIDIFNID
LSVMDEIKAYTDEMAAQKTAEAKAQIKVEVEKLKSMPDVHLFADAIAKMENAINEIDLPPMWPRPDIKGQLVEVKKQVAE
TEKKIADLRAQGVSEEQLPKIDINIEKIEKQLLDAEVKLKETYAMGAHLMPTSRSPHPGQEAQIKADFLQKWRTGQALTN
GDYACIDLSGENLVGIDLSGCYLEGVNFSHCDLSNANLEKSILAGANLSNAKLINANCQGANIGAANLSDADFSEANLSK
AQLGGSNFTRTQLLRCEMPEINFLDTTFEQTVFNGAVLKQCNFINPIFNNCEFIGTDLTQVNMVKPVLVQANFSQATLDG
ANFVEAQASESDFSQAQMINSRFVGGCILNNSNFSQVNLSKSCLRENQLNHCDFSHAQLAEADFSGAELADSQFVGAKAH
RTQFMKSQCQNADMRELNLMEGSLYKAYLVGVTFDRANLYCVNFIDSTLGNNSYKDANLDQTILKNWRP

Sequences:

>Translated_949_residues
MNIIKPLQLAVLHKSFSYLEKDIFAVSIPIAFSLTDGEILLEQKLWESVGEQIGNNIFDAAMPKACAEVLVAGDFIAPNN
KAVAAGLVHLQVSRQDQRGQWQDLVDKELLVFGDRNWYKQLGAGLASSSAELITTMTISYQNAYGGEGYQLNPEGKGFKP
VQTDTGEKQFLPNIEYKNQLLTSSSQQVPPASFGRVDMMWPQRLSLAGTYDQAYLDNQMPGLANDIDWLYFNDAAKDQWL
DGFFQGDEQYFISNMHAEHAVLKGQLPPIYGRAFVNQNVPLKDNNQQMTGEYQNEFKEIKTKLDTLWLFPNANMGVMIYR
GTIKGYSDDGCDITALLLACENRNDTPRHLQHYQDQLTKRLDPDHGYKYMLFSSPLIAEGMRCGFKQLQDDFDFPLEMLG
KANMDEFADTKKAEAMLQVDDAKLQIIEQCKAAGVDPTPYLDKINNPEKAPEQLKIEALMEKMAPGIVTDPENIDIFNID
LSVMDEIKAYTDEMAAQKTAEAKAQIKVEVEKLKSMPDVHLFADAIAKMENAINEIDLPPMWPRPDIKGQLVEVKKQVAE
TEKKIADLRAQGVSEEQLPKIDINIEKIEKQLLDAEVKLKETYAMGAHLMPTSRSPHPGQEAQIKADFLQKWRTGQALTN
GDYACIDLSGENLVGIDLSGCYLEGVNFSHCDLSNANLEKSILAGANLSNAKLINANCQGANIGAANLSDADFSEANLSK
AQLGGSNFTRTQLLRCEMPEINFLDTTFEQTVFNGAVLKQCNFINPIFNNCEFIGTDLTQVNMVKPVLVQANFSQATLDG
ANFVEAQASESDFSQAQMINSRFVGGCILNNSNFSQVNLSKSCLRENQLNHCDFSHAQLAEADFSGAELADSQFVGAKAH
RTQFMKSQCQNADMRELNLMEGSLYKAYLVGVTFDRANLYCVNFIDSTLGNNSYKDANLDQTILKNWRP
>Mature_949_residues
MNIIKPLQLAVLHKSFSYLEKDIFAVSIPIAFSLTDGEILLEQKLWESVGEQIGNNIFDAAMPKACAEVLVAGDFIAPNN
KAVAAGLVHLQVSRQDQRGQWQDLVDKELLVFGDRNWYKQLGAGLASSSAELITTMTISYQNAYGGEGYQLNPEGKGFKP
VQTDTGEKQFLPNIEYKNQLLTSSSQQVPPASFGRVDMMWPQRLSLAGTYDQAYLDNQMPGLANDIDWLYFNDAAKDQWL
DGFFQGDEQYFISNMHAEHAVLKGQLPPIYGRAFVNQNVPLKDNNQQMTGEYQNEFKEIKTKLDTLWLFPNANMGVMIYR
GTIKGYSDDGCDITALLLACENRNDTPRHLQHYQDQLTKRLDPDHGYKYMLFSSPLIAEGMRCGFKQLQDDFDFPLEMLG
KANMDEFADTKKAEAMLQVDDAKLQIIEQCKAAGVDPTPYLDKINNPEKAPEQLKIEALMEKMAPGIVTDPENIDIFNID
LSVMDEIKAYTDEMAAQKTAEAKAQIKVEVEKLKSMPDVHLFADAIAKMENAINEIDLPPMWPRPDIKGQLVEVKKQVAE
TEKKIADLRAQGVSEEQLPKIDINIEKIEKQLLDAEVKLKETYAMGAHLMPTSRSPHPGQEAQIKADFLQKWRTGQALTN
GDYACIDLSGENLVGIDLSGCYLEGVNFSHCDLSNANLEKSILAGANLSNAKLINANCQGANIGAANLSDADFSEANLSK
AQLGGSNFTRTQLLRCEMPEINFLDTTFEQTVFNGAVLKQCNFINPIFNNCEFIGTDLTQVNMVKPVLVQANFSQATLDG
ANFVEAQASESDFSQAQMINSRFVGGCILNNSNFSQVNLSKSCLRENQLNHCDFSHAQLAEADFSGAELADSQFVGAKAH
RTQFMKSQCQNADMRELNLMEGSLYKAYLVGVTFDRANLYCVNFIDSTLGNNSYKDANLDQTILKNWRP

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 105752; Mature: 105752

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIKPLQLAVLHKSFSYLEKDIFAVSIPIAFSLTDGEILLEQKLWESVGEQIGNNIFDA
CCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHH
AMPKACAEVLVAGDFIAPNNKAVAAGLVHLQVSRQDQRGQWQDLVDKELLVFGDRNWYKQ
HHHHHHHHHHHHCCEECCCCCEEEEEEEEEEECCCCCCCCHHHHHCCEEEEECCCHHHHH
LGAGLASSSAELITTMTISYQNAYGGEGYQLNPEGKGFKPVQTDTGEKQFLPNIEYKNQL
HCCCCCCCCCEEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCHHCCCCCHHHHHH
LTSSSQQVPPASFGRVDMMWPQRLSLAGTYDQAYLDNQMPGLANDIDWLYFNDAAKDQWL
HCCCCCCCCCCCCCCEEECCCCHHCCCCCHHHHHHCCCCCCCCCCCCEEEECCCCCHHHH
DGFFQGDEQYFISNMHAEHAVLKGQLPPIYGRAFVNQNVPLKDNNQQMTGEYQNEFKEIK
HHHHCCCHHHHHHHCCHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
TKLDTLWLFPNANMGVMIYRGTIKGYSDDGCDITALLLACENRNDTPRHLQHYQDQLTKR
HHHHEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
LDPDHGYKYMLFSSPLIAEGMRCGFKQLQDDFDFPLEMLGKANMDEFADTKKAEAMLQVD
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHEEEEC
DAKLQIIEQCKAAGVDPTPYLDKINNPEKAPEQLKIEALMEKMAPGIVTDPENIDIFNID
HHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCEEEEEC
LSVMDEIKAYTDEMAAQKTAEAKAQIKVEVEKLKSMPDVHLFADAIAKMENAINEIDLPP
HHHHHHHHHHHHHHHHHHHHHCHHEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
MWPRPDIKGQLVEVKKQVAETEKKIADLRAQGVSEEQLPKIDINIEKIEKQLLDAEVKLK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEECCCHHHHHHHHHCHHHHHH
ETYAMGAHLMPTSRSPHPGQEAQIKADFLQKWRTGQALTNGDYACIDLSGENLVGIDLSG
HHHHCCCEECCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCC
CYLEGVNFSHCDLSNANLEKSILAGANLSNAKLINANCQGANIGAANLSDADFSEANLSK
EEEECCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHH
AQLGGSNFTRTQLLRCEMPEINFLDTTFEQTVFNGAVLKQCNFINPIFNNCEFIGTDLTQ
HHCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHCCHHHHHCCCCCHHHCCCEEEECCCHH
VNMVKPVLVQANFSQATLDGANFVEAQASESDFSQAQMINSRFVGGCILNNSNFSQVNLS
HHCCCEEEEEECCCHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCEECCH
KSCLRENQLNHCDFSHAQLAEADFSGAELADSQFVGAKAHRTQFMKSQCQNADMRELNLM
HHHHHHCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
EGSLYKAYLVGVTFDRANLYCVNFIDSTLGNNSYKDANLDQTILKNWRP
CCCCEEEEEEEEEECCCCEEEEEEHHHHCCCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MNIIKPLQLAVLHKSFSYLEKDIFAVSIPIAFSLTDGEILLEQKLWESVGEQIGNNIFDA
CCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHH
AMPKACAEVLVAGDFIAPNNKAVAAGLVHLQVSRQDQRGQWQDLVDKELLVFGDRNWYKQ
HHHHHHHHHHHHCCEECCCCCEEEEEEEEEEECCCCCCCCHHHHHCCEEEEECCCHHHHH
LGAGLASSSAELITTMTISYQNAYGGEGYQLNPEGKGFKPVQTDTGEKQFLPNIEYKNQL
HCCCCCCCCCEEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCHHCCCCCHHHHHH
LTSSSQQVPPASFGRVDMMWPQRLSLAGTYDQAYLDNQMPGLANDIDWLYFNDAAKDQWL
HCCCCCCCCCCCCCCEEECCCCHHCCCCCHHHHHHCCCCCCCCCCCCEEEECCCCCHHHH
DGFFQGDEQYFISNMHAEHAVLKGQLPPIYGRAFVNQNVPLKDNNQQMTGEYQNEFKEIK
HHHHCCCHHHHHHHCCHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
TKLDTLWLFPNANMGVMIYRGTIKGYSDDGCDITALLLACENRNDTPRHLQHYQDQLTKR
HHHHEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
LDPDHGYKYMLFSSPLIAEGMRCGFKQLQDDFDFPLEMLGKANMDEFADTKKAEAMLQVD
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHEEEEC
DAKLQIIEQCKAAGVDPTPYLDKINNPEKAPEQLKIEALMEKMAPGIVTDPENIDIFNID
HHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCEEEEEC
LSVMDEIKAYTDEMAAQKTAEAKAQIKVEVEKLKSMPDVHLFADAIAKMENAINEIDLPP
HHHHHHHHHHHHHHHHHHHHHCHHEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
MWPRPDIKGQLVEVKKQVAETEKKIADLRAQGVSEEQLPKIDINIEKIEKQLLDAEVKLK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEECCCHHHHHHHHHCHHHHHH
ETYAMGAHLMPTSRSPHPGQEAQIKADFLQKWRTGQALTNGDYACIDLSGENLVGIDLSG
HHHHCCCEECCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCC
CYLEGVNFSHCDLSNANLEKSILAGANLSNAKLINANCQGANIGAANLSDADFSEANLSK
EEEECCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHH
AQLGGSNFTRTQLLRCEMPEINFLDTTFEQTVFNGAVLKQCNFINPIFNNCEFIGTDLTQ
HHCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHCCHHHHHCCCCCHHHCCCEEEECCCHH
VNMVKPVLVQANFSQATLDGANFVEAQASESDFSQAQMINSRFVGGCILNNSNFSQVNLS
HHCCCEEEEEECCCHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCEECCH
KSCLRENQLNHCDFSHAQLAEADFSGAELADSQFVGAKAHRTQFMKSQCQNADMRELNLM
HHHHHHCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
EGSLYKAYLVGVTFDRANLYCVNFIDSTLGNNSYKDANLDQTILKNWRP
CCCCEEEEEEEEEECCCCEEEEEEHHHHCCCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA