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The map label for this gene is yigB [H]

Identifier: 119943803

GI number: 119943803

Start: 15412

End: 16119

Strand: Reverse

Name: yigB [H]

Synonym: Ping_0009

Alternate gene names: 119943803

Gene position: 16119-15412 (Counterclockwise)

Preceding gene: 119943804

Following gene: 119943802

Centisome position: 0.35

GC content: 35.17

Gene sequence:

>708_bases
ATGAAATACTACCGGGCAATTAAACCTTTTAAAGCGATTAGTTTTGATCTTGATGATACGCTTTATGATAATCACCATAT
CATCAAAAAAGCCAATCAATCGATTATTGAGCACCTTAATCAAACCTATCCTGAGCTGGCAGAATTGACCGAAAAACAGT
GGTCATTATACAAAGATATAGAAGTGGCGGAATTTCCAGAAATAAAACATGATGTTTCTTTATGGCGAACCCAAACACTG
ACTCGAATAATGATCATTTACGGGATCCCGGAGTTTAAGGCCATAAAGTATGCACAACGTGCATTTTCTGAGTTTTTAAA
ACTGCGCAGTGATTTTGTAGTCCCGGAAGCAAGTTTAACGCTATTAGATAAGTTAGCACAAACTTACCCGATAATAGCTA
TTACTAATGGTAATGTTGATGAATTTAAAATCCAACTTGATGATAAATTTAAGTTTATTTTAAAAGCGGGTAATGGTTTT
AAATCTAAACCAGAAGGTGATTTGTTTATTGAAGCGGCCAGACGTTTAAATATTGAAGTCAGTGATATTTTACATGTCGG
CGATCATTTAATTAGTGATGTTTATGGTGCTCAAAACAATGGTGCACAAGCCGTTTGGTTTAATCCCAATAAGCAGTCTC
TGAGTGGTGCGATGTTATTACCAACCGTGGAAATCAGTCGTTTAGATCAATTATATAAACTGCTATAA

Upstream 100 bases:

>100_bases
CCTGGATTTTCAGCATTTATCAAAAATTTATGACCAGGCACACCCGCGTGCTAAACGTAAAAAATAATTACAAAATAACT
ACAGAAATGGATATATCACT

Downstream 100 bases:

>100_bases
TTTTCTTTTACTGAATAAATAAACAGGTCTTTTGTTATGGATGTTTCCTACTTAATTGATGATTTAAATGATCACCAGCG
TGCTGCTGTTTCCGCACCCG

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKYYRAIKPFKAISFDLDDTLYDNHHIIKKANQSIIEHLNQTYPELAELTEKQWSLYKDIEVAEFPEIKHDVSLWRTQTL
TRIMIIYGIPEFKAIKYAQRAFSEFLKLRSDFVVPEASLTLLDKLAQTYPIIAITNGNVDEFKIQLDDKFKFILKAGNGF
KSKPEGDLFIEAARRLNIEVSDILHVGDHLISDVYGAQNNGAQAVWFNPNKQSLSGAMLLPTVEISRLDQLYKLL

Sequences:

>Translated_235_residues
MKYYRAIKPFKAISFDLDDTLYDNHHIIKKANQSIIEHLNQTYPELAELTEKQWSLYKDIEVAEFPEIKHDVSLWRTQTL
TRIMIIYGIPEFKAIKYAQRAFSEFLKLRSDFVVPEASLTLLDKLAQTYPIIAITNGNVDEFKIQLDDKFKFILKAGNGF
KSKPEGDLFIEAARRLNIEVSDILHVGDHLISDVYGAQNNGAQAVWFNPNKQSLSGAMLLPTVEISRLDQLYKLL
>Mature_235_residues
MKYYRAIKPFKAISFDLDDTLYDNHHIIKKANQSIIEHLNQTYPELAELTEKQWSLYKDIEVAEFPEIKHDVSLWRTQTL
TRIMIIYGIPEFKAIKYAQRAFSEFLKLRSDFVVPEASLTLLDKLAQTYPIIAITNGNVDEFKIQLDDKFKFILKAGNGF
KSKPEGDLFIEAARRLNIEVSDILHVGDHLISDVYGAQNNGAQAVWFNPNKQSLSGAMLLPTVEISRLDQLYKLL

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjjG [H]

Homologues:

Organism=Escherichia coli, GI2367295, Length=239, Percent_Identity=38.4937238493724, Blast_Score=163, Evalue=8e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 27053; Mature: 27053

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00761 SPASE_I_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYYRAIKPFKAISFDLDDTLYDNHHIIKKANQSIIEHLNQTYPELAELTEKQWSLYKDI
CCCHHHHCCHHHEEECCCCHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
EVAEFPEIKHDVSLWRTQTLTRIMIIYGIPEFKAIKYAQRAFSEFLKLRSDFVVPEASLT
CHHHCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LLDKLAQTYPIIAITNGNVDEFKIQLDDKFKFILKAGNGFKSKPEGDLFIEAARRLNIEV
HHHHHHHHCCEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCHH
SDILHVGDHLISDVYGAQNNGAQAVWFNPNKQSLSGAMLLPTVEISRLDQLYKLL
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHCCCEEEECCHHHHHHHHHHHHC
>Mature Secondary Structure
MKYYRAIKPFKAISFDLDDTLYDNHHIIKKANQSIIEHLNQTYPELAELTEKQWSLYKDI
CCCHHHHCCHHHEEECCCCHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
EVAEFPEIKHDVSLWRTQTLTRIMIIYGIPEFKAIKYAQRAFSEFLKLRSDFVVPEASLT
CHHHCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LLDKLAQTYPIIAITNGNVDEFKIQLDDKFKFILKAGNGFKSKPEGDLFIEAARRLNIEV
HHHHHHHHCCEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCHH
SDILHVGDHLISDVYGAQNNGAQAVWFNPNKQSLSGAMLLPTVEISRLDQLYKLL
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHCCCEEEECCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254268; 1379743; 9278503; 6379604; 6324092 [H]